https://github.com/Reedwarbler/REPdenovo
Tip revision: 708f2f8efc40f6df0a64c1e4049f16e79f65f471 authored by SimonCChu on 26 May 2021, 15:31:03 UTC
add docker support
add docker support
Tip revision: 708f2f8
| File | Mode | Size |
|---|---|---|
| .idea | ||
| ContigsCompactor-v0.2.0 | ||
| TERefiner | ||
| .gitattributes | -rw-r--r-- | 378 bytes |
| .gitignore | -rw-r--r-- | 574 bytes |
| Assembly.py | -rw-r--r-- | 8.6 KB |
| BasicInfoPaser.py | -rw-r--r-- | 2.5 KB |
| ClassifyContigs.py | -rw-r--r-- | 6.9 KB |
| ContigsMerger | -rw-r--r-- | 245.6 KB |
| Dockerfile | -rw-r--r-- | 1.9 KB |
| ExtractKmers.py | -rw-r--r-- | 292 bytes |
| FilterAndScaffold.py | -rw-r--r-- | 7.3 KB |
| FilterPEReads.py | -rw-r--r-- | 3.5 KB |
| KmerCount.py | -rw-r--r-- | 3.2 KB |
| LICENSE | -rw-r--r-- | 1.0 KB |
| MergeContigs.py | -rw-r--r-- | 4.5 KB |
| README.md | -rw-r--r-- | 7.8 KB |
| REPdenovo-UserManual.pdf | -rw-r--r-- | 689.4 KB |
| TERefiner_1 | -rw-r--r-- | 3.0 MB |
| Utility.py | -rw-r--r-- | 1.2 KB |
| config_docker.txt | -rw-r--r-- | 500 bytes |
| main.py | -rw-r--r-- | 15.1 KB |
| sample_configuration_10X.txt | -rw-r--r-- | 555 bytes |
| sample_fastq.txt | -rw-r--r-- | 76 bytes |
| sample_input_paired_end_reads.txt | -rw-r--r-- | 153 bytes |
| sample_input_single_end_reads.txt | -rw-r--r-- | 66 bytes |
