https://github.com/abreschi/Rscripts
Tip revision: d313bde3bbeb8a93015c4445a038507e738c3617 authored by Alessandra Breschi on 02 March 2019, 09:14:14 UTC
add range feature to scale_matrix.R
add range feature to scale_matrix.R
Tip revision: d313bde
| File | Mode | Size |
|---|---|---|
| DESeq.analysis.R | -rwxr-xr-x | 3.8 KB |
| DEXSeq.analysis.R | -rw-r--r-- | 4.0 KB |
| GO_enrichment.R | -rwxr-xr-x | 4.9 KB |
| KEGG_enrichment.R | -rwxr-xr-x | 3.7 KB |
| PFAM_enrichment.R | -rw-r--r-- | 2.4 KB |
| README.md | -rw-r--r-- | 59 bytes |
| Rtsne.R | -rwxr-xr-x | 4.8 KB |
| SOM.R | -rwxr-xr-x | 4.8 KB |
| VennDiagram.R | -rwxr-xr-x | 3.2 KB |
| add_quantile.R | -rwxr-xr-x | 5.3 KB |
| anova.R | -rwxr-xr-x | 3.8 KB |
| barplot.GO.R | -rwxr-xr-x | 4.0 KB |
| boxplot_expressed_isoforms.R | -rwxr-xr-x | 6.3 KB |
| cutree.R | -rwxr-xr-x | 3.6 KB |
| differential_coSI.R | -rw-r--r-- | 4.0 KB |
| dimensRed.R | -rwxr-xr-x | 5.5 KB |
| edgeR.analysis.R | -rwxr-xr-x | 9.4 KB |
| element.detected.R | -rwxr-xr-x | 3.2 KB |
| flux.profile.R | -rwxr-xr-x | 2.0 KB |
| functions.R | -rw-r--r-- | 3.1 KB |
| gene.list.enrichment.R | -rwxr-xr-x | 2.6 KB |
| gene.pair.correlation.R | -rwxr-xr-x | 3.0 KB |
| ggSOM.R | -rwxr-xr-x | 4.0 KB |
| ggboxplot.R | -rwxr-xr-x | 8.1 KB |
| ggdendro.R | -rwxr-xr-x | 15.8 KB |
| ggheatmap.R | -rwxr-xr-x | 25.3 KB |
| gghist.R | -rwxr-xr-x | 8.2 KB |
| gglines.R | -rwxr-xr-x | 5.4 KB |
| ggpie.R | -rwxr-xr-x | 3.3 KB |
| ggpoints.R | -rwxr-xr-x | 9.1 KB |
| k-means.R | -rwxr-xr-x | 2.0 KB |
| major.isoform.across.samples.R | -rw-r--r-- | 5.4 KB |
| mann-whitney.R | -rwxr-xr-x | 2.5 KB |
| matrix_funct.R | -rwxr-xr-x | 5.7 KB |
| matrix_matrix_correlation.R | -rwxr-xr-x | 4.5 KB |
| matrix_matrix_operation.R | -rwxr-xr-x | 1.5 KB |
| matrix_to_dist.R | -rwxr-xr-x | 3.0 KB |
| matrix_wilcox.R | -rw-r--r-- | 4.4 KB |
| maxdiff.R | -rw-r--r-- | 18.9 KB |
| missing.values.R | -rw-r--r-- | 2.9 KB |
| modularity.R | -rwxr-xr-x | 3.1 KB |
| normalization.DESeq.R | -rw-r--r-- | 3.7 KB |
| normalize.matrix.R | -rwxr-xr-x | 7.4 KB |
| nt.coverage.R | -rw-r--r-- | 5.9 KB |
| plot.bigWig.profile.R | -rw-r--r-- | 3.0 KB |
| plot.differential.isoforms.R | -rw-r--r-- | 9.3 KB |
| plot.isoform.levels.R | -rwxr-xr-x | 3.1 KB |
| plot.mean.sd.R | -rwxr-xr-x | 4.4 KB |
| plot.network.R | -rwxr-xr-x | 6.0 KB |
| plot_pca.R | -rwxr-xr-x | 12.5 KB |
| projection.score.R | -rwxr-xr-x | 4.3 KB |
| quantile_normalization.R | -rw-r--r-- | 4.1 KB |
| read.genomic.coverage.R | -rwxr-xr-x | 3.6 KB |
| removeBatchEffect.R | -rwxr-xr-x | 6.7 KB |
| rpkm_distribution.R | -rwxr-xr-x | 7.1 KB |
| rpkm_fraction.R | -rwxr-xr-x | 5.9 KB |
| scale_matrix.R | -rwxr-xr-x | 6.6 KB |
| scatterplot.R | -rwxr-xr-x | 6.1 KB |
| sort.rpkm.lines.R | -rw-r--r-- | 3.5 KB |
| vlsvt.R | -rwxr-xr-x | 11.6 KB |
| wordcloud.R | -rwxr-xr-x | 3.5 KB |
