https://github.com/alexamlie/bed_statistics
History
Tip revision: c5fedb42e45f255481c6f09917f9c139782eb068 authored by alexamlie on 07 January 2016, 21:35:58 UTC
changed output messages
Tip revision: c5fedb4
File Mode Size
12_04_15_protein_coding_file_generation.sh -rwxr-xr-x 1.6 KB
12_09_15_unstranded_generation.sh -rw-r--r-- 1.3 KB
12_15_15_unstranded_utr_generation.sh -rw-r--r-- 805 bytes
README -rw-r--r-- 1.1 KB
bed_seq_content.sh -rwxr-xr-x 493 bytes
bed_shuffle_seq_stats.sh -rwxr-xr-x 476 bytes
bed_to_fasta.sh -rwxr-xr-x 370 bytes
chipseq.py -rw-r--r-- 13.0 KB
entrywise_bed_coverage.py -rw-r--r-- 48.0 KB
generate_full_utr_exclusive_elements.sh -rwxr-xr-x 5.6 KB
generate_isoforms.py -rw-r--r-- 3.2 KB
generate_unstranded_elements.sh -rwxr-xr-x 6.5 KB
genewise_bed_coverage.py -rw-r--r-- 27.2 KB
get_hg18_exclusive_elements.sh -rw-r--r-- 841 bytes
get_hg19_exclusive_elements.sh -rw-r--r-- 841 bytes
get_hg19_full_utr_exclusive_elements.sh -rw-r--r-- 8.6 KB
get_hg19_strand_exclusive_elements.sh -rw-r--r-- 2.0 KB
get_hg19_utr_exclusive_elements.sh -rw-r--r-- 4.3 KB
hg18_analysis_steps.sh -rw-r--r-- 1.8 KB
hg19_analysis_steps.sh -rw-r--r-- 10.1 KB
jellyfish_count_kmers.sh -rwxr-xr-x 602 bytes
merge_bed_files.py -rw-r--r-- 655 bytes
merge_reference_beds.py -rw-r--r-- 811 bytes
parse_bedfile_chrs.sh -rwxr-xr-x 693 bytes
parse_entrywise_class_hierarchy.sh -rwxr-xr-x 1.9 KB
parse_entrywise_exclusive_classes.sh -rwxr-xr-x 1.8 KB
parse_entrywise_output.sh -rwxr-xr-x 1.6 KB
parse_split_utr_hierarchy.sh -rwxr-xr-x 3.2 KB
parse_utr_class_hierarchy.sh -rwxr-xr-x 2.6 KB
perform_bed_partition_analysis.sh -rwxr-xr-x 4.6 KB
perform_bed_partition_analysis_noutr.sh -rwxr-xr-x 1.1 KB

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