https://github.com/b-cell-immunology/sciReptor
Tip revision: 6383850b5d8ea75b7120a2d35fbe973676d06ad6 authored by Christian Busse on 01 April 2021, 02:54:34 UTC
Update README.md
Update README.md
Tip revision: 6383850
| File | Mode | Size |
|---|---|---|
| lib | ||
| metainfo | ||
| tools | ||
| INSTALLATION.md | -rw-r--r-- | 11.8 KB |
| LICENSE | -rw-r--r-- | 33.7 KB |
| Makefile | -rw-r--r-- | 9.9 KB |
| Makefile.install | -rw-r--r-- | 915 bytes |
| Makefile.sanger | -rw-r--r-- | 2.4 KB |
| README.md | -rw-r--r-- | 307 bytes |
| bcelldb_init.pm | -rw-r--r-- | 6.7 KB |
| bcelldb_init.py | -rwxr-xr-x | 970 bytes |
| config | -rw-r--r-- | 7.2 KB |
| correct_tagconfusion.pm | -rw-r--r-- | 4.6 KB |
| create_spatials.py | -rwxr-xr-x | 7.9 KB |
| create_spatials_tcr.py | -rw-r--r-- | 6.2 KB |
| fromdb_consensus_fasta.pl | -rwxr-xr-x | 3.5 KB |
| fromdb_fasta.pl | -rwxr-xr-x | 2.5 KB |
| igdb_project.sql | -rw-r--r-- | 14.7 KB |
| mutation_matrix.pl | -rwxr-xr-x | 4.4 KB |
| perform_RazerS.pl | -rwxr-xr-x | 2.1 KB |
| perform_blast.sh | -rwxr-xr-x | 860 bytes |
| perform_igblast.sh | -rwxr-xr-x | 1.2 KB |
| perform_muscle.pl | -rwxr-xr-x | 993 bytes |
| pipeline_QC.R | -rw-r--r-- | 20.4 KB |
| pipeline_start.sh | -rwxr-xr-x | 1.6 KB |
| pipeline_status.sh | -rwxr-xr-x | 317 bytes |
| pre-flight.sh | -rwxr-xr-x | 2.3 KB |
| test_db_connection.pl | -rwxr-xr-x | 643 bytes |
| test_shakedown.sh | -rwxr-xr-x | 1.7 KB |
| todb_CDR_FWR.pl | -rwxr-xr-x | 12.0 KB |
| todb_VDJ.pl | -rwxr-xr-x | 5.7 KB |
| todb_consensus_sequences.pl | -rwxr-xr-x | 5.3 KB |
| todb_consensus_tags.pl | -rwxr-xr-x | 13.0 KB |
| todb_constant.pl | -rwxr-xr-x | 3.6 KB |
| todb_flow.R | -rw-r--r-- | 12.4 KB |
| todb_igblast_align.pl | -rwxr-xr-x | 2.9 KB |
| todb_mutations_from_align.pl | -rwxr-xr-x | 8.9 KB |
| todb_reads.pl | -rwxr-xr-x | 5.6 KB |
| todb_sampleinfo_highth.pl | -rwxr-xr-x | 10.5 KB |
| todb_sampleinfo_sanger.pl | -rwxr-xr-x | 3.7 KB |
| todb_sequences_sanger.pl | -rwxr-xr-x | 4.6 KB |
| todb_tags.pl | -rwxr-xr-x | 2.5 KB |
