https://github.com/bdo311/chirpseq-analysis
Tip revision: 64a5cdbb1fbac1ef8c5cca844ea743b80641287c authored by Brian Do on 07 April 2017, 20:04:27 UTC
Update README.md
Update README.md
Tip revision: 64a5cdb
| File | Mode | Size |
|---|---|---|
| trim | ||
| LICENSE | -rwxr-xr-x | 11.1 KB |
| README.md | -rwxr-xr-x | 2.0 KB |
| averageBedgraphs.sh | -rw-r--r-- | 541 bytes |
| bedGraph2sam.pl | -rwxr-xr-x | 2.5 KB |
| countMappedReads.py | -rw-r--r-- | 1.3 KB |
| fixfastq.py | -rw-r--r-- | 716 bytes |
| getTotalCount.py | -rwxr-xr-x | 804 bytes |
| makeAverageBedgraph.py | -rw-r--r-- | 554 bytes |
| makeBedgraphSmaller.py | -rwxr-xr-x | 1.5 KB |
| norm_bedGraph.pl | -rwxr-xr-x | 875 bytes |
| normalizeBedgraph.py | -rwxr-xr-x | 1.4 KB |
| peak_correlation.pl | -rwxr-xr-x | 5.3 KB |
| plotChIRPRepeat.r | -rwxr-xr-x | 3.2 KB |
| removeInterval.py | -rwxr-xr-x | 1.8 KB |
| rescaleRepeatBedgraph.py | -rw-r--r-- | 1.2 KB |
| runRetroviral.py | -rw-r--r-- | 6.5 KB |
| runchip.sh | -rwxr-xr-x | 4.1 KB |
| runchip_old.sh | -rw-r--r-- | 3.8 KB |
| runchipnexus.sh | -rw-r--r-- | 3.0 KB |
| runchirp.sh | -rwxr-xr-x | 8.7 KB |
| runchirp_allele.sh | -rw-r--r-- | 4.0 KB |
| rungro.sh | -rw-r--r-- | 4.3 KB |
| rungro_old.sh | -rw-r--r-- | 2.5 KB |
| runproseq.sh | -rw-r--r-- | 2.5 KB |
| runproseq_rnorm.sh | -rw-r--r-- | 2.9 KB |
| runrnaseq_singleend.sh | -rw-r--r-- | 3.3 KB |
| takeLower.py | -rwxr-xr-x | 526 bytes |
