https://github.com/greenelab/PathCORE-analysis
Tip revision: 95b72e0c6c79e16df421f5e4db107d5658392efb authored by Kathy Chen on 06 June 2018, 22:47:44 UTC
Merge pull request #11 from kathyxchen/biodata-mining-revisions
Merge pull request #11 from kathyxchen/biodata-mining-revisions
Tip revision: 95b72e0
| File | Mode | Size |
|---|---|---|
| constants | ||
| data | ||
| figures | ||
| jupyter-notebooks | ||
| .gitignore | -rw-r--r-- | 1.2 KB |
| ANALYSIS.sh | -rwxr-xr-x | 553 bytes |
| LICENSE | -rw-r--r-- | 1.5 KB |
| README.md | -rw-r--r-- | 6.7 KB |
| analysis_Paeruginosa_NMF.sh | -rwxr-xr-x | 2.7 KB |
| analysis_Paeruginosa_eADAGE.sh | -rwxr-xr-x | 2.5 KB |
| analysis_TCGA_NMF.sh | -rwxr-xr-x | 2.3 KB |
| common_Paeruginosa_eADAGE.sh | -rw-r--r-- | 1.0 KB |
| data_generate_NMF_model.py | -rw-r--r-- | 3.7 KB |
| example-mLab-credentials.yml | -rw-r--r-- | 131 bytes |
| requirements.txt | -rw-r--r-- | 199 bytes |
| run_network_creation.py | -rw-r--r-- | 17.2 KB |
| run_permutation_test.py | -rw-r--r-- | 6.4 KB |
| utils.py | -rw-r--r-- | 5.9 KB |
| utils_setup_PAO1_example.py | -rw-r--r-- | 3.0 KB |
| web_db_Paeruginosa_eADAGE.sh | -rwxr-xr-x | 1.1 KB |
| web_edge_page_data.py | -rw-r--r-- | 13.3 KB |
| web_initialize_db.py | -rw-r--r-- | 11.0 KB |
