https://github.com/gringer/bioinfscripts
Tip revision: cc40b6b0edd27642d3d40d46ade1b9dbf9686c20 authored by David Eccles (gringer) on 07 September 2019, 11:17:37 UTC
Updated README.md with GitLab message
Updated README.md with GitLab message
Tip revision: cc40b6b
| File | Mode | Size |
|---|---|---|
| affytools | ||
| data | ||
| webblast | ||
| weblabeler | ||
| GenABEL2GIANT.pl | -rwxr-xr-x | 2.8 KB |
| LICENSE | -rw-r--r-- | 34.3 KB |
| RCVS_filter.pl | -rwxr-xr-x | 385 bytes |
| README.md | -rw-r--r-- | 327 bytes |
| addKraken2Silva.pl | -rwxr-xr-x | 2.3 KB |
| aggregate.pl | -rwxr-xr-x | 327 bytes |
| align2csv.pl | -rwxr-xr-x | 1.0 KB |
| androidEmailExtractor.py | -rwxr-xr-x | 5.3 KB |
| bam2proportion.sh | -rwxr-xr-x | 2.0 KB |
| blastx_boundaries.pl | -rwxr-xr-x | 560 bytes |
| bootstrap.r | -rwxr-xr-x | 26.4 KB |
| bootstrap2rank.sh | -rw-r--r-- | 566 bytes |
| chunkFilter.pl | -rwxr-xr-x | 1.1 KB |
| circularAnnotator.r | -rwxr-xr-x | 6.4 KB |
| connected_components.r | -rwxr-xr-x | 9.0 KB |
| csplot.r | -rwxr-xr-x | 11.6 KB |
| delta_stats.pl | -rwxr-xr-x | 8.6 KB |
| dotplotAnnotator.r | -rwxr-xr-x | 2.2 KB |
| edgebeeguildfinder.py | -rwxr-xr-x | 2.8 KB |
| exchange_rate.pl | -rwxr-xr-x | 2.4 KB |
| expenseTemplate.tex | -rw-r--r-- | 3.3 KB |
| fasta-nsplit.pl | -rwxr-xr-x | 1.1 KB |
| fasta2svg.pl | -rwxr-xr-x | 6.1 KB |
| fastafetch.py | -rwxr-xr-x | 6.3 KB |
| fastm2fastx.pl | -rwxr-xr-x | 1.1 KB |
| fastq2fasta.pl | -rwxr-xr-x | 943 bytes |
| fastqcat.pl | -rwxr-xr-x | 890 bytes |
| fastx-annotate.pl | -rwxr-xr-x | 1.9 KB |
| fastx-cgmasker.pl | -rwxr-xr-x | 2.3 KB |
| fastx-fetch.pl | -rwxr-xr-x | 4.1 KB |
| fastx-grep.pl | -rwxr-xr-x | 2.1 KB |
| fastx-hplength.pl | -rwxr-xr-x | 3.6 KB |
| fastx-interleave.pl | -rwxr-xr-x | 4.6 KB |
| fastx-isofilter.pl | -rwxr-xr-x | 2.2 KB |
| fastx-kdotplot.pl | -rwxr-xr-x | 11.3 KB |
| fastx-length.pl | -rwxr-xr-x | 3.3 KB |
| fastx-qualHist.pl | -rwxr-xr-x | 1.4 KB |
| fastx-rc.pl | -rwxr-xr-x | 2.1 KB |
| fastx-repeatFilter.pl | -rwxr-xr-x | 4.4 KB |
| fastx-rlength.pl | -rwxr-xr-x | 3.5 KB |
| fastx-sample.pl | -rwxr-xr-x | 2.3 KB |
| fastx-sort.pl | -rwxr-xr-x | 2.7 KB |
| fastx2fastm.pl | -rwxr-xr-x | 911 bytes |
| fmod.py | -rwxr-xr-x | 4.0 KB |
| fourievar.r | -rwxr-xr-x | 1.1 KB |
| get_sequences.pl | -rwxr-xr-x | 7.9 KB |
| gfa_cleaner.pl | -rwxr-xr-x | 926 bytes |
| gfa_stats.r | -rw-r--r-- | 8.1 KB |
| gtcounts2MAF.pl | -rwxr-xr-x | 1.0 KB |
| gtshuffle.pl | -rwxr-xr-x | 9.8 KB |
| gtsubset.pl | -rwxr-xr-x | 1.7 KB |
| indiv_minimal.pl | -rwxr-xr-x | 5.2 KB |
| job2tex.pl | -rwxr-xr-x | 19.2 KB |
| jobTemplate.tex | -rw-r--r-- | 5.3 KB |
| karyotyper.r | -rwxr-xr-x | 5.8 KB |
| labid2UUID.pl | -rwxr-xr-x | 1.6 KB |
| last-rmident.pl | -rwxr-xr-x | 674 bytes |
| lastlopper.pl | -rwxr-xr-x | 12.2 KB |
| length_plot.r | -rwxr-xr-x | 27.6 KB |
| maf2gfa.pl | -rwxr-xr-x | 2.8 KB |
| maf_bcsplit.pl | -rwxr-xr-x | 3.4 KB |
| markercsv2linkage.pl | -rwxr-xr-x | 2.1 KB |
| maxMinCSPlotter.r | -rwxr-xr-x | 7.7 KB |
| mergeFast5events.pl | -rwxr-xr-x | 1.4 KB |
| minimus2_OCA.sh | -rwxr-xr-x | 1.3 KB |
| mitochondrial_descendants.pl | -rwxr-xr-x | 1.2 KB |
| mpileupDC.pl | -rwxr-xr-x | 2.4 KB |
| nanopore_barcode.pl | -rwxr-xr-x | 6.1 KB |
| nbmt-translate.pl | -rwxr-xr-x | 3.1 KB |
| normalise_seqlengths.pl | -rwxr-xr-x | 5.6 KB |
| obo2csv.pl | -rwxr-xr-x | 699 bytes |
| paf2mat.pl | -rwxr-xr-x | 663 bytes |
| path_extrude.scad | -rw-r--r-- | 11.5 KB |
| pedtodot.sh | -rwxr-xr-x | 2.5 KB |
| perlshaper.pl | -rwxr-xr-x | 71.2 KB |
| pileupPropView.r | -rwxr-xr-x | 1.3 KB |
| porejuicer.py | -rwxr-xr-x | 22.6 KB |
| posAggregate.pl | -rwxr-xr-x | 1.6 KB |
| power_analysis.r | -rw-r--r-- | 2.4 KB |
| psl_culler.pl | -rwxr-xr-x | 5.8 KB |
| psl_scaffolder.pl | -rwxr-xr-x | 9.9 KB |
| quantile_subset.pl | -rwxr-xr-x | 2.1 KB |
| readstomper.pl | -rwxr-xr-x | 7.7 KB |
| readthrough.py | -rwxr-xr-x | 4.5 KB |
| repaver.r | -rwxr-xr-x | 21.8 KB |
| rsfilter.pl | -rwxr-xr-x | 3.5 KB |
| sam-senseflagger.pl | -rwxr-xr-x | 2.2 KB |
| sam2LongestBase.pl | -rwxr-xr-x | 1.5 KB |
| sam2mapped.pl | -rwxr-xr-x | 1.3 KB |
| seqmat.r | -rwxr-xr-x | 9.2 KB |
| shufflefastx.pl | -rwxr-xr-x | 2.5 KB |
| signal_viewer.r | -rwxr-xr-x | 14.5 KB |
| simplegt2tped.pl | -rwxr-xr-x | 5.2 KB |
| simplifyPed.pl | -rwxr-xr-x | 5.3 KB |
| snpchip2linkage.pl | -rwxr-xr-x | 5.6 KB |
| spiralign.r | -rw-r--r-- | 4.7 KB |
| stl2svg.pl | -rwxr-xr-x | 7.7 KB |
| svgImport.r | -rw-r--r-- | 4.2 KB |
| tped2gtcounts.pl | -rwxr-xr-x | 1.7 KB |
| tped2trios.pl | -rwxr-xr-x | 4.0 KB |
| transpose.pl | -rwxr-xr-x | 345 bytes |
| vcf2fq.pl | -rwxr-xr-x | 4.2 KB |
| vcf2simplegt.pl | -rwxr-xr-x | 1.8 KB |
| vcf_normalise.pl | -rwxr-xr-x | 1.6 KB |
| vcf_windowSorter.pl | -rwxr-xr-x | 1.9 KB |
| vcfutils.pl | -rwxr-xr-x | 17.3 KB |
