https://github.com/mikeusru/Braintown
Tip revision: edcae373be800b7c33eae02dab52d517e17c2482 authored by mikeusru on 17 April 2019, 13:57:20 UTC
added workaround for other multichannel tifs
added workaround for other multichannel tifs
Tip revision: edcae37
| File | Mode | Size |
|---|---|---|
| 3d_Images | ||
| Helper functions | ||
| autofocusAnalysis | ||
| automation | ||
| functionChoosing | ||
| old | ||
| .gitignore | -rw-r--r-- | 103 bytes |
| braintown.m | -rw-r--r-- | 55 bytes |
| bw2gray.m | -rw-r--r-- | 158 bytes |
| detachedSpineOverlap.mat | -rw-r--r-- | 17.9 KB |
| learningAnalysis1.mat | -rw-r--r-- | 124.2 KB |
| read_tiff_func.m | -rw-r--r-- | 2.0 KB |
| spineOverlap.mat | -rw-r--r-- | 27.6 KB |
| uaa_RUN.m | -rw-r--r-- | 1.4 KB |
| uaa_addNewDataset.m | -rw-r--r-- | 1.9 KB |
| uaa_addPolyRoi.m | -rw-r--r-- | 810 bytes |
| uaa_addRoi.m | -rw-r--r-- | 1.1 KB |
| uaa_analyzeSingleImage.m | -rw-r--r-- | 3.3 KB |
| uaa_autoLoadAndAnalyzeImages.m | -rw-r--r-- | 2.0 KB |
| uaa_autoOptions.fig | -rw-r--r-- | 67.5 KB |
| uaa_autoOptions.m | -rw-r--r-- | 67.8 KB |
| uaa_bwAreaOpen.m | -rw-r--r-- | 302 bytes |
| uaa_calcAll.m | -rw-r--r-- | 1.1 KB |
| uaa_calcRoiInfo.m | -rw-r--r-- | 2.0 KB |
| uaa_calculateRegionalZStacks.m | -rw-r--r-- | 650 bytes |
| uaa_changeFrame.m | -rw-r--r-- | 1.2 KB |
| uaa_deleteRoi.m | -rw-r--r-- | 738 bytes |
| uaa_deleteRoiHandles.m | -rw-r--r-- | 457 bytes |
| uaa_derivativeProject.m | -rw-r--r-- | 2.4 KB |
| uaa_dispUserData.m | -rw-r--r-- | 69 bytes |
| uaa_drawConnectingLine.m | -rw-r--r-- | 257 bytes |
| uaa_driftCorrectUsingSubstack.m | -rw-r--r-- | 3.5 KB |
| uaa_expandAroundPixel.m | -rw-r--r-- | 1006 bytes |
| uaa_exportDatasetToParts.m | -rw-r--r-- | 414 bytes |
| uaa_extractRegionsOfInterestFromLargeImage.m | -rw-r--r-- | 713 bytes |
| uaa_findImageBorder.m | -rw-r--r-- | 876 bytes |
| uaa_getAllImageFrames.m | -rw-r--r-- | 305 bytes |
| uaa_getCurrentImageFrame.m | -rw-r--r-- | 404 bytes |
| uaa_getVarFromHandle.m | -rw-r--r-- | 823 bytes |
| uaa_golgiAnalysis.m | -rw-r--r-- | 16.3 KB |
| uaa_imageFrame_keypressfcn.m | -rw-r--r-- | 420 bytes |
| uaa_imageToGrid.m | -rw-r--r-- | 1.2 KB |
| uaa_imagesToStack.m | -rw-r--r-- | 263 bytes |
| uaa_largeImageGui.fig | -rw-r--r-- | 21.1 KB |
| uaa_largeImageGui.m | -rw-r--r-- | 4.0 KB |
| uaa_loadImageStruct.m | -rw-r--r-- | 1.0 KB |
| uaa_loadTiffFiles.m | -rw-r--r-- | 361 bytes |
| uaa_main.fig | -rw-r--r-- | 34.5 KB |
| uaa_main.m | -rw-r--r-- | 32.0 KB |
| uaa_makeCharts.m | -rw-r--r-- | 2.1 KB |
| uaa_makeExampleMovie.m | -rw-r--r-- | 1.7 KB |
| uaa_makeFig.m | -rw-r--r-- | 1.1 KB |
| uaa_openFile.m | -rw-r--r-- | 1.2 KB |
| uaa_projectImage.m | -rw-r--r-- | 485 bytes |
| uaa_saveSettings.m | -rw-r--r-- | 938 bytes |
| uaa_settings.mat | -rw-r--r-- | 904 bytes |
| uaa_setupTable.m | -rw-r--r-- | 936 bytes |
| uaa_showRois.m | -rw-r--r-- | 1.6 KB |
| uaa_splitImage.m | -rw-r--r-- | 380 bytes |
| uaa_track_spines_over_time.m | -rw-r--r-- | 3.5 KB |
| uaa_updateGUI.m | -rw-r--r-- | 3.6 KB |
| uaa_updateImage.m | -rw-r--r-- | 5.1 KB |
| uaa_updateRoiInfo.m | -rw-r--r-- | 1.1 KB |
