https://github.com/orionzhou/SPADA
Tip revision: 167235eb26dbd817d2b43571b43fb06becc129d6 authored by orionzhou on 06 June 2017, 17:06:00 UTC
updated config file
updated config file
Tip revision: 167235e
| File | Mode | Size |
|---|---|---|
| Bio | ||
| hmm.crp | ||
| test | ||
| Align.pm | -rw-r--r-- | 7.9 KB |
| BLOSUM62 | -rw-r--r-- | 2.0 KB |
| BLOSUM80 | -rw-r--r-- | 2.0 KB |
| Common.pm | -rw-r--r-- | 8.1 KB |
| CompareModel.pm | -rw-r--r-- | 7.1 KB |
| ConfigSetup.pm | -rw-r--r-- | 3.8 KB |
| Gene.pm | -rw-r--r-- | 2.0 KB |
| Gff.pm | -rw-r--r-- | 2.6 KB |
| Gtb.pm | -rw-r--r-- | 1.5 KB |
| Hits.pm | -rw-r--r-- | 24.3 KB |
| Hmm.pm | -rw-r--r-- | 16.5 KB |
| Location.pm | -rw-r--r-- | 16.5 KB |
| ModelEval.pm | -rw-r--r-- | 18.3 KB |
| ModelPred.pm | -rw-r--r-- | 13.7 KB |
| MotifMining.pm | -rw-r--r-- | 1.1 KB |
| Mtb.pm | -rw-r--r-- | 10.7 KB |
| PrepareGenome.pm | -rw-r--r-- | 4.8 KB |
| README | -rw-r--r-- | 703 bytes |
| Rna.pm | -rw-r--r-- | 10.2 KB |
| Seq.pm | -rw-r--r-- | 12.4 KB |
| SignalP.pm | -rw-r--r-- | 5.5 KB |
| Software.pm | -rw-r--r-- | 17.5 KB |
| build_profile.pl | -rwxr-xr-x | 6.2 KB |
| cfg.txt | -rw-r--r-- | 1.8 KB |
| cs_aln.pl | -rwxr-xr-x | 892 bytes |
| eval.pl | -rwxr-xr-x | 6.1 KB |
| gff2gtb.pl | -rwxr-xr-x | 1.4 KB |
| gfffix.pl | -rwxr-xr-x | 6.7 KB |
| gtb.cmp.pl | -rwxr-xr-x | 3.4 KB |
| gtb.phase.pl | -rwxr-xr-x | 1.6 KB |
| gtb2gff.pl | -rwxr-xr-x | 1.8 KB |
| gtb2gtbx.pl | -rwxr-xr-x | 2.5 KB |
| profile.pl | -rwxr-xr-x | 2.5 KB |
| seq.check.pl | -rwxr-xr-x | 1.6 KB |
| spada.pl | -rwxr-xr-x | 4.9 KB |
| stat.R | -rw-r--r-- | 690 bytes |
