https://github.com/solgenomics/Bio-GenomeUpdate
Tip revision: f1098e0987fcd3c718fdfed8d04a584ec1a5b8d6 authored by Surya Saha on 24 January 2020, 19:26:09 UTC
edited for OGSv3 lncRNAs from ITAG. No mRNA records now
edited for OGSv3 lncRNAs from ITAG. No mRNA records now
Tip revision: f1098e0
| File | Mode | Size |
|---|---|---|
| lib | ||
| scripts | ||
| t | ||
| .gitignore | -rw-r--r-- | 140 bytes |
| README.md | -rw-r--r-- | 257 bytes |
| add_contig_accessions.pl | -rwxr-xr-x | 8.1 KB |
| align_BACends_group_coords.pl | -rwxr-xr-x | 27.5 KB |
| dist.ini | -rw-r--r-- | 180 bytes |
| get_bac_locations_from_mummer_coords.pl | -rwxr-xr-x | 5.1 KB |
| group_coords.pl | -rwxr-xr-x | 20.0 KB |
| modify_with_fish.pl | -rwxr-xr-x | 555 bytes |
| place_bacs.pl | -rwxr-xr-x | 13.7 KB |
| process_bac_assembly.pl | -rwxr-xr-x | 14.2 KB |
| reorder_scaffolds.pl | -rwxr-xr-x | 2.9 KB |
| set_scaffold_gap_sizes.pl | -rwxr-xr-x | 2.7 KB |
| summarize.pl | -rwxr-xr-x | 3.4 KB |
| tpf.pl | -rwxr-xr-x | 3.9 KB |
| update_coordinates_gff.pl | -rwxr-xr-x | 6.8 KB |
| validate_gff.pl | -rwxr-xr-x | 5.5 KB |
