https://github.com/sujaikumar/assemblage
Tip revision: 91ddcad732eaeba7dc839589ae5e4d983dde09a9 authored by Sujai Kumar on 08 September 2016, 09:48:12 UTC
added blobtools link
added blobtools link
Tip revision: 91ddcad
| File | Mode | Size |
|---|---|---|
| 959.nematodegenomes.rdf.xml | -rw-r--r-- | 613.7 KB |
| README-CNE.md | -rw-r--r-- | 12.8 KB |
| README-annotation.md | -rw-r--r-- | 26.0 KB |
| README-meloidogyne.md | -rw-r--r-- | 21.7 KB |
| README.md | -rw-r--r-- | 43.0 KB |
| adapters.fa | -rw-r--r-- | 160 bytes |
| bedsum | -rwxr-xr-x | 41 bytes |
| bigmem_blat.pl | -rwxr-xr-x | 683 bytes |
| blast_separate_taxa.pl | -rwxr-xr-x | 2.6 KB |
| blast_taxonomy_report.pl | -rwxr-xr-x | 5.1 KB |
| blastm8_filter.pl | -rwxr-xr-x | 7.5 KB |
| blobology.R | -rwxr-xr-x | 2.9 KB |
| bowtie2_extract_reads_mapped_to_specific_contigs.pl | -rwxr-xr-x | 4.0 KB |
| clc_cas_to_sspace_tab.bash | -rwxr-xr-x | 1.4 KB |
| clc_len_cov_gc_insert.pl | -rwxr-xr-x | 9.0 KB |
| coding.gff.bash | -rwxr-xr-x | 581 bytes |
| fastaqual_multiline_to_singleline.pl | -rwxr-xr-x | 177 bytes |
| fastaqual_select.pl | -rwxr-xr-x | 6.4 KB |
| fastq2fasta.pl | -rwxr-xr-x | 93 bytes |
| fgrep.pl | -rw-r--r-- | 700 bytes |
| khmer_re_pair.pl | -rwxr-xr-x | 2.0 KB |
| link_blast.pl | -rw-r--r-- | 9.0 KB |
| list_pairwise.pl | -rw-r--r-- | 153 bytes |
| maf_insert_lc.pl | -rw-r--r-- | 3.6 KB |
| maf_length_id.pl | -rw-r--r-- | 9.8 KB |
| maf_overlapping_bed.pl | -rw-r--r-- | 3.1 KB |
| maf_remove_lc.pl | -rw-r--r-- | 11.6 KB |
| maf_select.pl | -rw-r--r-- | 6.1 KB |
| maf_to_gff.pl | -rw-r--r-- | 2.5 KB |
| map_data_ids.pl | -rw-r--r-- | 2.7 KB |
| merge_blast2goannot_gff.pl | -rwxr-xr-x | 1.6 KB |
| multi2single | -rwxr-xr-x | 291 bytes |
| plot_insert_freq_txt_binned.R | -rwxr-xr-x | 1008 bytes |
| sam_len_cov_gc_insert.pl | -rwxr-xr-x | 11.6 KB |
| scaffold_stats.pl | -rwxr-xr-x | 11.7 KB |
| seq_st_en_merge_overlapping.pl | -rwxr-xr-x | 800 bytes |
| shuffleSequences_fastx.pl | -rwxr-xr-x | 644 bytes |
| unshuffleSequences_fastx.pl | -rwxr-xr-x | 629 bytes |
