https://github.com/vinuesa/get_phylomarkers
Tip revision: f97c4ff58ba76fdf4de51d8f44773da4d98a54c4 authored by vinuesa on 03 April 2024, 02:32:14 UTC
test_get_phylomarkers.t: restored 23 tests
test_get_phylomarkers.t: restored 23 tests
Tip revision: f97c4ff
| File | Mode | Size |
|---|---|---|
| bin | ||
| docs | ||
| lib | ||
| pics | ||
| pop_gen_tables | ||
| test_sequences | ||
| .dockerignore | -rw-r--r-- | 870 bytes |
| .gitignore | -rw-r--r-- | 910 bytes |
| .gitmodules | -rw-r--r-- | 0 bytes |
| .travis.yml | -rw-r--r-- | 578 bytes |
| CHANGES.txt | -rw-r--r-- | 23.5 KB |
| Dockerfile | -rw-r--r-- | 5.4 KB |
| INSTALL.md | -rw-r--r-- | 21.7 KB |
| LICENSE.txt | -rw-r--r-- | 33.6 KB |
| Makefile | -rw-r--r-- | 621 bytes |
| README.md | -rw-r--r-- | 10.1 KB |
| add_labels2tree.pl | -rwxr-xr-x | 8.5 KB |
| add_nos2fasta_header.pl | -rwxr-xr-x | 578 bytes |
| apt-install_R_dependencies.sh | -rwxr-xr-x | 883 bytes |
| compute_suppValStas_and_RF-dist.R | -rwxr-xr-x | 19.1 KB |
| concat_alignments.pl | -rwxr-xr-x | 3.0 KB |
| convert_aln_format_batch_bp.pl | -rwxr-xr-x | 2.2 KB |
| cpanfile | -rw-r--r-- | 296 bytes |
| estimate_pangenome_phylogenies.sh | -rwxr-xr-x | 51.4 KB |
| install_R_deps.R | -rwxr-xr-x | 3.2 KB |
| install_kdetrees_from_github.R | -rwxr-xr-x | 942 bytes |
| kdetrees_0.1.5.tar.gz | -rw-r--r-- | 1.1 MB |
| pal2nal.pl | -rwxr-xr-x | 64.5 KB |
| popGen_summStats.pl | -rwxr-xr-x | 42.0 KB |
| remove_uninformative_sites_from_aln.pl | -rwxr-xr-x | 4.5 KB |
| rename.pl | -rwxr-xr-x | 3.2 KB |
| run_get_phylomarkers_pipeline.sh | -rwxr-xr-x | 126.0 KB |
| run_kdetrees.R | -rwxr-xr-x | 15.6 KB |
| run_make_tests.sh | -rwxr-xr-x | 292 bytes |
| run_parallel_cmmds.pl | -rwxr-xr-x | 2.1 KB |
| run_parallel_molecClock_test_with_paup.sh | -rwxr-xr-x | 26.8 KB |
| run_pexec_cmmds.sh | -rwxr-xr-x | 1.8 KB |
| run_test_suite.sh | -rwxr-xr-x | 5.1 KB |
| test_get_phylomarkers.t | -rw-r--r-- | 5.2 KB |
