https://github.com/yafeng/proteogenomics_python
Tip revision: 4b1638aa75903225e9ae45892af4cb9f078d7421 authored by Yafeng Zhu on 17 October 2019, 16:22:21 UTC
Bayesian false discovery rates for class specific FDR calculation
Bayesian false discovery rates for class specific FDR calculation
Tip revision: 4b1638a
| File | Mode | Size |
|---|---|---|
| 3frame_translation.py | -rw-r--r-- | 589 bytes |
| BayesClassSpecificFDR.py | -rwxr-xr-x | 3.8 KB |
| IDmap_file_example.txt | -rw-r--r-- | 249 bytes |
| README.md | -rw-r--r-- | 4.6 KB |
| calculate_phastcons.py | -rw-r--r-- | 1.7 KB |
| calculate_phylocsf.py | -rw-r--r-- | 3.5 KB |
| convertCOSMIC2_mutant_protein.py | -rw-r--r-- | 6.9 KB |
| digest_mutant_protein.py | -rw-r--r-- | 3.1 KB |
| extract_1mismatch_novpsm.py | -rw-r--r-- | 989 bytes |
| group_novpepToLoci.py | -rw-r--r-- | 2.5 KB |
| label_nsSNP_pep.py | -rw-r--r-- | 1.5 KB |
| label_sub_pos.py | -rw-r--r-- | 2.0 KB |
| manhatanplot.R | -rw-r--r-- | 1.2 KB |
| map_cosmic_snp_tohg19.py | -rw-r--r-- | 5.7 KB |
| map_novelpeptide2genome.py | -rw-r--r-- | 11.8 KB |
| map_peptide2genome.py | -rw-r--r-- | 9.3 KB |
| parse_BLASTP_out.py | -rw-r--r-- | 3.8 KB |
| parse_BLAT_out.py | -rw-r--r-- | 1.9 KB |
| parse_annovar_out.py | -rw-r--r-- | 1.8 KB |
| parse_spectrumAI_out.py | -rw-r--r-- | 2.2 KB |
| scan_bams.py | -rw-r--r-- | 6.7 KB |
| sixframetranslation.py | -rw-r--r-- | 4.4 KB |
