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| Revision | Author | Date | Message | Commit Date |
|---|---|---|---|---|
| 5689d97 | Dmitry Yu. Naumov | 21 May 2023, 19:07:44 UTC | Merge branch 'RefactorNumericalStabilization' into 'master' Refactor numerical stabilization algorithms See merge request ogs/ogs!4570 | 21 May 2023, 19:07:44 UTC |
| 96e6103 | Dmitri Naumov | 17 April 2023, 09:36:06 UTC | [T/M] Slightly relax ctests' tolerances This is not related to the numerical stabilization refactorings. | 21 May 2023, 19:06:44 UTC |
| ba28f6c | Dmitri Naumov | 17 April 2023, 09:35:11 UTC | [T/THM] Slightly relax ctest tolerances for A2* | 21 May 2023, 19:02:07 UTC |
| 8e8203a | Dmitri Naumov | 14 April 2023, 18:17:36 UTC | [PL/THM] Refactor to use NumericalStabilization Similar to HT refactoring the dispersivity computation is using zeros. | 21 May 2023, 19:02:07 UTC |
| 1eb6166 | Dmitri Naumov | 17 April 2023, 15:43:02 UTC | [PL/THM] Rename scalar shape functions N, dNdx This is necessary for the integration loop (for full upwind/numerical diffusion) being outside of the local assembler. | 21 May 2023, 19:02:07 UTC |
| fe3e778 | Dmitri Naumov | 14 April 2023, 17:54:26 UTC | [PL/HT] Refactor to use NumericalStabilization Computation of the thermal dispersivity turned out to be somewhat cumbersome and requires further refactorings to unify the passed coefficients avoiding multiplication with zero hacks. | 21 May 2023, 19:02:07 UTC |
| f46bef2 | Dmitri Naumov | 14 April 2023, 16:43:47 UTC | [NL] Remove type info from variable name | 21 May 2023, 19:02:07 UTC |
| 5c6a55d | Dmitri Naumov | 14 April 2023, 16:31:06 UTC | [PL/CT][NL] Move hydrodynamic dispersion code Following same pattern as for the assembly of the advection matrix, using the visitor pattern, the computation is moved from individual process into NumLib. | 21 May 2023, 19:02:07 UTC |
| cfbf58e | Dmitri Naumov | 14 April 2023, 16:42:11 UTC | [NL] Move advection matrix assembly in own file | 21 May 2023, 19:02:07 UTC |
| 46013f5 | Dmitri Naumov | 14 April 2023, 16:03:32 UTC | [PL/CT] Update for new numerical stabilization impl Using variant type replacing the unique_ptr, unify function calls. | 21 May 2023, 19:02:07 UTC |
| 905e262 | Dmitri Naumov | 14 April 2023, 16:01:11 UTC | [NL] Use visitor in assembleAdvectionMatrix | 21 May 2023, 19:02:07 UTC |
| f3020ad | Dmitri Naumov | 14 April 2023, 15:54:18 UTC | [NL] Separate NumericalStabilization classes hierarchy Using a variant type. | 21 May 2023, 19:02:07 UTC |
| da798f6 | Dmitri Naumov | 14 April 2023, 12:20:25 UTC | [NL] Move method to specific class The computeArtificialDiffusion method is specific to the IsotropicDiffusion numerical stabilization. | 21 May 2023, 19:02:07 UTC |
| 831b56c | Dmitri Naumov | 14 April 2023, 11:58:15 UTC | [NL] Separate NumericalStabilization create method | 21 May 2023, 19:02:07 UTC |
| a5e01bc | Dmitri Naumov | 14 April 2023, 11:33:07 UTC | [NL] Fix variable name typo | 21 May 2023, 19:02:07 UTC |
| 07b97bf | Dmitri Naumov | 14 April 2023, 11:24:46 UTC | [NL] Smaller cleanups in numerical stab. creation - Make cutoff velocity non-optional for both, the full upwind and isotropic diffusion. - No else after return. - Single place for output of type. | 21 May 2023, 19:02:07 UTC |
| 5f6be52 | Dmitri Naumov | 14 April 2023, 11:22:54 UTC | [NL] Move cutoff velocity in specific classes Reduces the interface of the base class | 21 May 2023, 19:02:07 UTC |
| ff3f642 | Dmitry Yu. Naumov | 16 May 2023, 21:05:26 UTC | Merge branch 'minor_impr' into 'master' Apply clang-format to files in MeshLib/MeshEditing See merge request ogs/ogs!4609 | 16 May 2023, 21:05:26 UTC |
| df53879 | Wenqing Wang | 16 May 2023, 15:44:56 UTC | [MeshLib/MeshEditing] Removed unnecessary path in some includes | 16 May 2023, 15:54:34 UTC |
| be24fce | Wenqing Wang | 16 May 2023, 15:53:29 UTC | [MeshLib/MeshEditing] clang-format | 16 May 2023, 15:53:29 UTC |
| eec8a0b | Lars Bilke | 16 May 2023, 06:30:34 UTC | Merge branch 'FixNetCDFDataExplorerBug' into 'master' Fix bug in NetCdf reader in DataExplorer See merge request ogs/ogs!4606 | 16 May 2023, 06:30:34 UTC |
| f47e4bd | Tom Fischer | 15 May 2023, 18:37:03 UTC | Merge branch 'ReplaceDynamicSpan' into 'master' Replace BaseLib::DynamicSpan with std::span See merge request ogs/ogs!4605 | 15 May 2023, 18:37:03 UTC |
| cf5406a | Thomas Fischer | 15 May 2023, 06:20:39 UTC | [App/DE/VtkVis] Don't destroy current mesh in destructor Storing the mesh as unique_ptr destroys the mesh after NecCdfConfigureDialog goes out of scope. Now, the unique_ptr is released in the destructor. The owner of the data is now responsible for clean up the mesh. | 15 May 2023, 06:20:39 UTC |
| 41a8f02 | Dmitri Naumov | 12 May 2023, 16:01:41 UTC | [T/NL] Move function for tests into Tests/NumLib Includes optimizations on vector construction in ReferenceElement. Creation of span with fixed size extent is used in the tests/ReferenceElementUtils. | 12 May 2023, 16:11:47 UTC |
| 12b7136 | Dmitri Naumov | 12 May 2023, 15:02:00 UTC | [BL] Remove unnecessary DynamicSpan The STL's std::span is used instead. | 12 May 2023, 16:11:47 UTC |
| 2de1975 | Dmitri Naumov | 12 May 2023, 15:01:06 UTC | [NL] Replace BL::DynamicSpan with std::span | 12 May 2023, 16:11:47 UTC |
| 12d959a | Dmitri Naumov | 12 May 2023, 13:04:03 UTC | [MatL] Replace BaseLib::DynamicSpan with std::span | 12 May 2023, 16:11:47 UTC |
| 2933d54 | Dmitry Yu. Naumov | 12 May 2023, 13:19:02 UTC | Merge branch 'RasterImprovements' into 'master' [GeoLib::Raster] Add default {copy, move} {constructor, assignment operator} See merge request ogs/ogs!4599 | 12 May 2023, 13:19:02 UTC |
| 886ea6f | Thomas Fischer | 11 May 2023, 11:51:30 UTC | [GL/Raster] Clang format | 12 May 2023, 12:19:07 UTC |
| d5768b4 | Thomas Fischer | 11 May 2023, 11:50:45 UTC | [T/GL] Update raster test using comparison ops. | 12 May 2023, 12:19:07 UTC |
| 6406c69 | Dmitry Yu. Naumov | 12 May 2023, 11:24:04 UTC | Merge branch 'PLLC_optim' into 'master' Updated PLLC implementation for performance and accuracy improvements. See merge request ogs/ogs!4603 | 12 May 2023, 11:24:04 UTC |
| 3a05992 | Thomas Fischer | 11 May 2023, 11:50:01 UTC | [GL/Raster] Comparison operator for RasterHeader and Raster | 12 May 2023, 11:03:58 UTC |
| bd9916f | Thomas Fischer | 08 May 2023, 07:23:16 UTC | [T] Unit tests for constructors / assignment ops | 12 May 2023, 11:03:58 UTC |
| 3ad5964 | Thomas Fischer | 27 April 2023, 07:43:32 UTC | [GL/Raster] Create default copy-, move-constructor, copy-, and move-assignment operators | 12 May 2023, 11:03:58 UTC |
| efd46f8 | Thomas Fischer | 27 April 2023, 07:36:49 UTC | [MeL/MeshGenerators/Raster2Mesh] Use Raster::data() | 12 May 2023, 11:03:58 UTC |
| d51e457 | Thomas Fischer | 27 April 2023, 07:32:51 UTC | [App/DE/VtkVis/VtkRaster] Use Raster::data() | 12 May 2023, 11:03:58 UTC |
| a3d5885 | Thomas Fischer | 27 April 2023, 07:30:50 UTC | [App/IO/AsciiRasterInterface] Use Raster::data() md | 12 May 2023, 11:03:58 UTC |
| 2cd6199 | Thomas Fischer | 27 April 2023, 07:29:16 UTC | [GL/Raster] Use std::vector instead of raw C array | 12 May 2023, 11:03:58 UTC |
| 37e3bcd | Thomas Nagel | 11 May 2023, 13:50:51 UTC | Updated PLLC implementation for performance and accuracy improvements. | 12 May 2023, 09:35:15 UTC |
| dbfc268 | Tom Fischer | 11 May 2023, 19:10:12 UTC | Merge branch 'SmallFixes' into 'master' Independent small fixes after gcc-13 and petsc-3.19 update. See merge request ogs/ogs!4602 | 11 May 2023, 19:10:12 UTC |
| 0458a0e | Dmitry Yu. Naumov | 11 May 2023, 14:16:12 UTC | Merge branch 'MaterialIDBasedOutput' into 'master' Output submesh specified by material ids See merge request ogs/ogs!4594 | 11 May 2023, 14:16:12 UTC |
| e9829cf | Dmitri Naumov | 11 May 2023, 13:34:12 UTC | [MaL] Use PETSC_NULLPTR Replacing deprecated PETSC_NULL since petsc version 3.19. | 11 May 2023, 13:35:13 UTC |
| 49bf62a | Dmitri Naumov | 11 May 2023, 13:33:14 UTC | [PL] Missing includes for function and mutex | 11 May 2023, 13:35:13 UTC |
| ec364d6 | Wenqing Wang | 10 May 2023, 14:27:14 UTC | [Warning] Fixed a 'redundant move' warning | 11 May 2023, 13:35:13 UTC |
| 8e75a86 | Thomas Fischer | 05 May 2023, 06:35:32 UTC | Mv splitMaterialIdString() from ProjectData to BaseLib/StringTools | 11 May 2023, 09:30:53 UTC |
| 150a287 | Thomas Fischer | 05 May 2023, 06:09:36 UTC | [PL/Output] Fwd decl. of MeL::Mesh | 11 May 2023, 09:30:53 UTC |
| 3def4ec | Thomas Fischer | 04 May 2023, 10:42:27 UTC | [docu] Docu for specifying the material ids for output | 11 May 2023, 09:30:53 UTC |
| 4452b79 | Thomas Fischer | 08 May 2023, 07:39:01 UTC | [T] Update patched project file reference | 11 May 2023, 09:30:53 UTC |
| ada8690 | Thomas Fischer | 04 May 2023, 09:49:27 UTC | [T] ctest for material ID based output | 11 May 2023, 09:30:53 UTC |
| b04565c | Thomas Fischer | 04 May 2023, 08:54:18 UTC | [T] Specify material ID based submesh for output | 11 May 2023, 09:30:53 UTC |
| d48a9af | Thomas Fischer | 04 May 2023, 08:53:23 UTC | [T] Add material IDs to mesh | 11 May 2023, 09:30:53 UTC |
| f9e6b31 | Thomas Fischer | 04 May 2023, 06:23:01 UTC | [T/MeL] Unit tests createMaterialIDsBasedSubMesh() | 11 May 2023, 09:30:53 UTC |
| 853f48e | Thomas Fischer | 03 May 2023, 13:41:49 UTC | [T/MeL] Unit tests getMeshElementsForMaterialIDs() | 11 May 2023, 09:30:52 UTC |
| 0ca39d4 | Thomas Fischer | 28 April 2023, 12:41:44 UTC | [PL/Output] Read material_ids from prj file and construct mesh | 11 May 2023, 09:30:52 UTC |
| 7d2a38e | Thomas Fischer | 03 May 2023, 12:37:22 UTC | [MeL] Impl. of createMaterialIDsBasedSubMesh() | 11 May 2023, 09:30:52 UTC |
| c82f5b0 | Thomas Fischer | 28 April 2023, 12:44:46 UTC | [MeL] Fct. to get elems for specified material ids | 11 May 2023, 09:30:52 UTC |
| 226d59e | Thomas Fischer | 03 May 2023, 12:35:29 UTC | [MeL/MeshEditing] Rm useless include / forward decl. | 11 May 2023, 09:30:52 UTC |
| a552451 | Thomas Fischer | 28 April 2023, 13:07:42 UTC | [PL/Output] Pass meshes (non-const) to createOutputConfig() | 11 May 2023, 09:30:52 UTC |
| 659697f | Tom Fischer | 11 May 2023, 08:19:15 UTC | Merge branch 'CatchExceptionsInOpenMpLoop' into 'master' [PL] Catch and rethrow exceptions in openMP loop See merge request ogs/ogs!4595 | 11 May 2023, 08:19:15 UTC |
| b1cfdb5 | Dmitri Naumov | 11 May 2023, 08:12:16 UTC | [T/TRM] Slightly relax temperature tolerance Failing on Windows the omp version. | 11 May 2023, 08:12:32 UTC |
| 74cdfd3 | Dmitri Naumov | 01 May 2023, 13:27:28 UTC | [PL] Catch and rethrow exceptions in openMP loop | 10 May 2023, 18:20:32 UTC |
| 8cee6d8 | Lars Bilke | 10 May 2023, 12:18:32 UTC | Merge branch 'fix-linux-ci' into 'master' Fix CI See merge request ogs/ogs!4600 | 10 May 2023, 12:18:32 UTC |
| f039b54 | Lars Bilke | 10 May 2023, 10:48:52 UTC | Revert "Revert "[scr/ci] Work around xvfb-run errors"" This reverts commit 1c17c3a500d5428f4258d4ef4d2f2abc3245b31a. | 10 May 2023, 10:48:52 UTC |
| 89ddfaf | Lars Bilke | 09 May 2023, 09:31:50 UTC | [cmake] Initialize var in ogs_add_library. On @heinzej's machine somehow `type` was set to `MODULE_LIBRARY` from outside which should not be possible (except if type is a cache variable). | 09 May 2023, 09:31:50 UTC |
| 1c17c3a | Lars Bilke | 08 May 2023, 06:56:17 UTC | Revert "[scr/ci] Work around xvfb-run errors" This reverts commit c1fde293bbfad277a1985a1bab562b7f81a6af25. | 09 May 2023, 09:31:14 UTC |
| 6910e21 | Dmitry Yu. Naumov | 08 May 2023, 17:09:10 UTC | Merge branch 'WellboreSimulator-EOS-5' into 'master' WellboreSimulator-EOS: clean up See merge request ogs/ogs!4568 | 08 May 2023, 17:09:10 UTC |
| b1bd6f8 | ChaofanChen | 14 April 2023, 14:08:02 UTC | [UnitTest/Water] Update name and add test points for saturation temp. | 08 May 2023, 14:33:28 UTC |
| cad4646 | ChaofanChen | 14 April 2023, 13:42:54 UTC | [MPL/water] Add missed name and re-order, update comments, delete unused include. | 08 May 2023, 13:04:04 UTC |
| 1985113 | Tom Fischer | 08 May 2023, 11:20:43 UTC | Merge branch 'THM/SecondaryVarsOutput' into 'master' [PL/THM] Add rho_FR, mu, and sigma to output See merge request ogs/ogs!3979 | 08 May 2023, 11:20:43 UTC |
| e026da9 | Dmitri Naumov | 03 February 2022, 15:34:46 UTC | [T/THM] A2; Add fluid_density and viscosity test Slightly relax the tolerances for sigma and NodalForces. | 05 May 2023, 20:42:51 UTC |
| a457668 | Dmitri Naumov | 03 February 2022, 10:11:04 UTC | [PL/THM] Add rho_FR, mu, and sigma to output Both, the extrapolated data and the element-wise averages are output. Darcy velocity computation is moved to computeSecondary() function and the result is stored in the integration point data. | 05 May 2023, 15:53:32 UTC |
| 50a2d1d | Tom Fischer | 04 May 2023, 13:04:52 UTC | Merge branch 'SmallFixes' into 'master' Independent small fixes See merge request ogs/ogs!4593 | 04 May 2023, 13:04:52 UTC |
| 0f22f1a | Tom Fischer | 04 May 2023, 12:20:30 UTC | Merge branch 'XdmfTimeValuePrecisionFix' into 'master' [MeL/IO] Increase time value output precision Closes #3404 See merge request ogs/ogs!4582 | 04 May 2023, 12:20:30 UTC |
| 4415377 | Dmitri Naumov | 27 April 2023, 17:12:14 UTC | [PL] Increase time step/delta value output precision to better distinguish close time steps, small deltas. | 04 May 2023, 11:49:36 UTC |
| 0716134 | Dmitri Naumov | 27 April 2023, 17:11:09 UTC | [T/XDMF] Additional output time step Testing precision of the output value written in the xdmf file. | 04 May 2023, 11:49:36 UTC |
| 64fedd2 | Dmitri Naumov | 27 April 2023, 16:25:34 UTC | [MeL/IO] Increase time value output precision The default is not sufficient to distinguish two time points. Fixes #3404. | 04 May 2023, 11:49:36 UTC |
| f5c0a8b | Lars Bilke | 04 May 2023, 09:01:42 UTC | [web] Added link to XML patch documentation. | 04 May 2023, 09:01:42 UTC |
| 1e8d6cb | Dmitry Yu. Naumov | 03 May 2023, 16:35:04 UTC | Merge branch 'RemoveUnusedCode' into 'master' [App/DE] Remove unused files See merge request ogs/ogs!4590 | 03 May 2023, 16:35:04 UTC |
| 233030c | Dmitri Naumov | 03 May 2023, 16:32:15 UTC | [AL] Suppress warning when no processes are compiled | 03 May 2023, 16:32:15 UTC |
| 359236b | Dmitri Naumov | 02 May 2023, 12:35:27 UTC | [PL] Scope non-PETSc function to avoid a warning The openGlobalMatrixOutputFile() is used only in the non-PETSc configuration. | 03 May 2023, 16:30:34 UTC |
| a55eab0 | Dmitri Naumov | 03 May 2023, 16:29:51 UTC | [BL] Add missing explicit templ. inst. decls | 03 May 2023, 16:30:17 UTC |
| bd0c5cb | Dmitri Naumov | 03 May 2023, 14:40:12 UTC | [App/DE] Remove unused files | 03 May 2023, 14:40:12 UTC |
| d1e3185 | Lars Bilke | 03 May 2023, 14:14:53 UTC | Merge branch 'update-pyvista' into 'master' [py] Update PyVista to 0.38.6. Closes #3406 See merge request ogs/ogs!4589 | 03 May 2023, 14:14:53 UTC |
| 828943f | Lars Bilke | 03 May 2023, 13:32:51 UTC | [py] Update PyVista to 0.38.6. Fixes #3406. | 03 May 2023, 13:32:51 UTC |
| 3ce5644 | Lars Bilke | 02 May 2023, 06:56:04 UTC | Merge branch 'FixSerialCaseOpenMpParallelization' into 'master' Fix serial case of the OpenMP parallelization Closes #3405 See merge request ogs/ogs!4584 | 02 May 2023, 06:56:04 UTC |
| 6f577d8 | Tom Fischer | 02 May 2023, 05:28:29 UTC | Merge branch 'FixOutputPrimaryVariables' into 'master' Fix: output primary variables if nothing specified See merge request ogs/ogs!4585 | 02 May 2023, 05:28:29 UTC |
| e97eb2d | Dmitri Naumov | 30 April 2023, 21:08:20 UTC | [PL/O] Use contains method instead of find == end | 30 April 2023, 21:08:20 UTC |
| b8220b6 | Dmitri Naumov | 30 April 2023, 21:04:11 UTC | [PL/O] Output primary variables if nothing specified Without the additional test the primary variables of a process are not added to the output if the <variables> section is empty. | 30 April 2023, 21:06:43 UTC |
| 0f98feb | Dmitri Naumov | 30 April 2023, 21:03:59 UTC | [T/HT] Modify tests to output all variables | 30 April 2023, 21:03:59 UTC |
| d14ba9a | Christoph Lehmann | 28 April 2023, 19:05:17 UTC | [PL] Improved OpenMP performance a bit | 30 April 2023, 13:56:49 UTC |
| b953bab | Dmitri Naumov | 28 April 2023, 15:38:27 UTC | [PL] Remove unused member function | 30 April 2023, 13:56:49 UTC |
| 4630a72 | Dmitri Naumov | 28 April 2023, 15:38:04 UTC | [PL] Remove sorting of indices before global add This is more expensive then not to do it at all. For a particular TRM test the assembly time went down back to pre-OpenMP from 0.25s to 0.16s. | 30 April 2023, 13:56:49 UTC |
| 892884d | Dmitry Yu. Naumov | 28 April 2023, 16:40:47 UTC | Merge branch 'SmallFixes' into 'master' Various independent changes See merge request ogs/ogs!4583 | 28 April 2023, 16:40:47 UTC |
| 46f0c6b | Dmitry Yu. Naumov | 28 April 2023, 16:08:15 UTC | Merge branch 'covariant-view' into 'master' Iterator concepts for the covariant view See merge request ogs/ogs!4565 | 28 April 2023, 16:08:15 UTC |
| 4cc78ee | Dmitri Naumov | 28 April 2023, 14:30:34 UTC | [T/TRM] Slightly relax pressure ctest tolerance | 28 April 2023, 14:30:34 UTC |
| 4627ec0 | Dmitri Naumov | 28 April 2023, 13:56:41 UTC | [T/TRM] A2 slightly relax tolerances of omp run | 28 April 2023, 13:56:41 UTC |
| 463a24f | Dmitri Naumov | 28 April 2023, 12:10:49 UTC | IO; Add missing includes | 28 April 2023, 13:32:25 UTC |
| b8ffa81 | Dmitri Naumov | 30 March 2023, 11:25:41 UTC | [T/MFront] Move MFront related tests in own folder | 28 April 2023, 13:32:16 UTC |
| f63d45c | Dmitri Naumov | 30 March 2023, 13:43:30 UTC | [MatL/MFront] Fix error message spacing. | 28 April 2023, 13:32:16 UTC |
| bf00009 | Dmitri Naumov | 24 February 2023, 23:17:42 UTC | [T/SD] Use faster linear solver | 28 April 2023, 13:31:53 UTC |
