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Revision | Author | Date | Message | Commit Date |
---|---|---|---|---|
ed8d3b8 | Lars Bilke | 24 May 2023, 13:21:32 UTC | Merge branch 'mac-petsc' into 'master' Draft: [ci] Added job 'build mac petsc arm64', used for notebooks too. See merge request ogs/ogs!4617 | 24 May 2023, 13:21:32 UTC |
7bcbf66 | Lars Bilke | 24 May 2023, 13:15:45 UTC | [ci] Run snakemake_reorder_mesh in parallel. | 24 May 2023, 13:21:23 UTC |
2dabd08 | Lars Bilke | 24 May 2023, 12:31:13 UTC | [ci] Adapt for new labels. | 24 May 2023, 13:21:23 UTC |
b2be28d | Lars Bilke | 24 May 2023, 11:29:41 UTC | [T] Relax tolerances for m1-mac. | 24 May 2023, 13:21:22 UTC |
21af7fe | Lars Bilke | 24 May 2023, 11:29:19 UTC | [T] Added new ctest label 'petsc-mumps' to benchmarks. | 24 May 2023, 13:21:22 UTC |
008104c | Lars Bilke | 24 May 2023, 11:28:37 UTC | [cmake] Added LABELS parameter to AddTest(). | 24 May 2023, 13:21:22 UTC |
29d2fb2 | Lars Bilke | 22 May 2023, 19:52:28 UTC | [ci] Added job 'build mac petsc arm64', used for notebooks too. | 24 May 2023, 13:21:22 UTC |
ad7390e | Dmitry Yu. Naumov | 24 May 2023, 06:59:50 UTC | Merge branch 'move_mesh_dirs' into 'master' Move three sub-folders out of MeshLib See merge request ogs/ogs!4618 | 24 May 2023, 06:59:50 UTC |
167b191 | Dmitri Naumov | 23 May 2023, 16:43:50 UTC | [MTL] Update namespace scope closing comment | 23 May 2023, 16:44:08 UTC |
01b46c7 | Wenqing Wang | 23 May 2023, 12:15:41 UTC | [VoxelGridFromLayeredMeshes] Using forward declaration and adding nacessary std includes | 23 May 2023, 16:44:08 UTC |
d67be00 | Wenqing Wang | 23 May 2023, 09:36:02 UTC | [MeshToolsLib] Changed the namespace of the classes and the functions defined in the files in MeshToolsLib. | 23 May 2023, 16:44:07 UTC |
11b504a | Wenqing Wang | 22 May 2023, 09:28:44 UTC | [CMake] Link the new mesh related lib to the associated libs | 23 May 2023, 16:44:07 UTC |
b42c0e6 | Wenqing Wang | 22 May 2023, 09:15:18 UTC | [MeshLib] Moved MeshEditing, MeshQuality, MeshGenerators, and some other files to MeshToolsLib | 23 May 2023, 16:44:07 UTC |
6111157 | Wenqing Wang | 22 May 2023, 08:54:41 UTC | [CMake#NumLib] removed library link to MeshGeoToolsLib | 23 May 2023, 16:44:07 UTC |
3638177 | Wenqing Wang | 22 May 2023, 09:49:08 UTC | [MeshLib] Moved files DuplicateMeshComponents.h/cpp from MeshEditing to Utils | 23 May 2023, 16:44:07 UTC |
e7c2b36 | Wenqing Wang | 16 May 2023, 10:59:49 UTC | [MeshLib] Moved VtkMeshConverter.h/cpp from MeshLib/MeshGenerators to MeshLib/IO/VtkIO/ | 23 May 2023, 16:44:07 UTC |
ac197a5 | Dmitry Yu. Naumov | 23 May 2023, 16:35:19 UTC | Merge branch 'RefactorNumericalStabilization' into 'master' Refactor numerical stabilization algorithms See merge request ogs/ogs!4570 | 23 May 2023, 16:35:19 UTC |
dbd1014 | Dmitri Naumov | 14 April 2023, 18:17:36 UTC | [PL/THM] Refactor to use NumericalStabilization Similar to HT refactoring the dispersivity computation is using zeros. | 23 May 2023, 08:15:07 UTC |
4816a3f | Dmitri Naumov | 17 April 2023, 15:43:02 UTC | [PL/THM] Rename scalar shape functions N, dNdx This is necessary for the integration loop (for full upwind/numerical diffusion) being outside of the local assembler. | 23 May 2023, 08:15:07 UTC |
4961185 | Dmitri Naumov | 14 April 2023, 17:54:26 UTC | [PL/HT] Refactor to use NumericalStabilization Computation of the thermal dispersivity turned out to be somewhat cumbersome and requires further refactorings to unify the passed coefficients avoiding multiplication with zero hacks. | 23 May 2023, 08:15:07 UTC |
797e600 | Dmitri Naumov | 14 April 2023, 16:43:47 UTC | [NL] Remove type info from variable name | 23 May 2023, 08:15:07 UTC |
57d075c | Dmitri Naumov | 14 April 2023, 16:31:06 UTC | [PL/CT][NL] Move hydrodynamic dispersion code Following same pattern as for the assembly of the advection matrix, using the visitor pattern, the computation is moved from individual process into NumLib. | 23 May 2023, 08:15:07 UTC |
debef67 | Dmitri Naumov | 14 April 2023, 16:42:11 UTC | [NL] Move advection matrix assembly in own file | 23 May 2023, 08:15:07 UTC |
2d3d6b1 | Dmitri Naumov | 14 April 2023, 16:03:32 UTC | [PL/CT] Update for new numerical stabilization impl Using variant type replacing the unique_ptr, unify function calls. | 23 May 2023, 08:15:07 UTC |
a54241a | Dmitri Naumov | 14 April 2023, 16:01:11 UTC | [NL] Use visitor in assembleAdvectionMatrix | 23 May 2023, 08:15:07 UTC |
16b7df2 | Dmitri Naumov | 14 April 2023, 15:54:18 UTC | [NL] Separate NumericalStabilization classes hierarchy Using a variant type. | 23 May 2023, 08:15:07 UTC |
1396355 | Dmitri Naumov | 14 April 2023, 12:20:25 UTC | [NL] Move method to specific class The computeArtificialDiffusion method is specific to the IsotropicDiffusion numerical stabilization. | 23 May 2023, 08:15:07 UTC |
ed2c868 | Dmitri Naumov | 14 April 2023, 11:58:15 UTC | [NL] Separate NumericalStabilization create method | 23 May 2023, 08:15:07 UTC |
463376c | Dmitri Naumov | 14 April 2023, 11:33:07 UTC | [NL] Fix variable name typo | 23 May 2023, 08:15:07 UTC |
f5fea9b | Dmitri Naumov | 14 April 2023, 11:24:46 UTC | [NL] Smaller cleanups in numerical stab. creation - Make cutoff velocity non-optional for both, the full upwind and isotropic diffusion. - No else after return. - Single place for output of type. | 23 May 2023, 08:15:07 UTC |
706bea2 | Dmitri Naumov | 14 April 2023, 11:22:54 UTC | [NL] Move cutoff velocity in specific classes Reduces the interface of the base class | 23 May 2023, 08:15:07 UTC |
a2d69b7 | Tom Fischer | 23 May 2023, 07:15:48 UTC | Merge branch 'refactLayers2Grid' into 'master' [tools] Refactor Layers2Grid See merge request ogs/ogs!4588 | 23 May 2023, 07:15:48 UTC |
e292b56 | Lars Bilke | 23 May 2023, 06:35:36 UTC | Merge branch 'bgr-tol' into 'master' [T] Relax some tolerances. Closes ufz-bgr/hpc/docs#47 See merge request ogs/ogs!4615 | 23 May 2023, 06:35:36 UTC |
c11d913 | Julian Heinze | 02 May 2023, 09:09:04 UTC | Created VoxelGridFromLayeredmeshes.cpp/.h | 22 May 2023, 14:45:16 UTC |
df325dc | Julian Heinze | 27 April 2023, 13:58:45 UTC | Extract Layers2Grid | 22 May 2023, 14:45:16 UTC |
49d4f97 | Dmitry Yu. Naumov | 22 May 2023, 13:18:41 UTC | Merge branch 'XyzToLayeredRasterList' into 'master' Mentioning possible raster file formats for layered mesh generation See merge request ogs/ogs!4616 | 22 May 2023, 13:18:41 UTC |
c0d5fe5 | rinkk | 22 May 2023, 10:58:23 UTC | mentioning possible raster file formats for layered mesh generation | 22 May 2023, 13:18:14 UTC |
5b6be53 | Lars Bilke | 22 May 2023, 13:16:09 UTC | Updated container-maker. | 22 May 2023, 13:16:09 UTC |
a0a8406 | Lars Bilke | 22 May 2023, 10:51:18 UTC | Merge branch 'eve-toolchain' into 'master' [eve] Updated to toolchain 2022b See merge request ogs/ogs!4592 | 22 May 2023, 10:51:18 UTC |
2c11da0 | Dmitry Yu. Naumov | 22 May 2023, 10:50:12 UTC | Merge branch 'Wellbore_simulator_EOS_clean_up' into 'master' [Water IF97] Wellbore simulator EOS clean up Closes #3408 See merge request ogs/ogs!4614 | 22 May 2023, 10:50:12 UTC |
e4659cf | Lars Bilke | 22 May 2023, 10:07:56 UTC | Merge branch 'petsc-envinf-tag' into 'master' [ci] Pin linux petsc job to 'petsc' runner tag. See merge request ogs/ogs!4610 | 22 May 2023, 10:07:56 UTC |
813e74b | Lars Bilke | 22 May 2023, 09:42:06 UTC | [ci] Made linux petsc job manual. | 22 May 2023, 09:42:06 UTC |
e56a65a | Lars Bilke | 17 May 2023, 08:55:32 UTC | [ci] Pin linux petsc job 'petsc' runner tag. Allows for selecting runners on demand via their tags. | 22 May 2023, 09:41:05 UTC |
2cc9b82 | Lars Bilke | 22 May 2023, 09:39:34 UTC | Merge branch 'no-dangling-reference' into 'master' [cmake] -Wno-dangling-reference for gcc 13.1.1. See merge request ogs/ogs!4607 | 22 May 2023, 09:39:34 UTC |
522166a | Lars Bilke | 15 May 2023, 09:36:51 UTC | [cmake] -Wno-dangling-reference for gcc 13.1.1. Related https://gitlab.opengeosys.org/ogs/ogs/-/merge_requests/4597. | 22 May 2023, 09:24:51 UTC |
69e05fc | Lars Bilke | 11 May 2023, 09:05:10 UTC | [eve] Set PETSc config options via module script. | 22 May 2023, 08:45:22 UTC |
79e3980 | Lars Bilke | 11 May 2023, 06:25:17 UTC | [eve] Disabled old toolchain modules. | 22 May 2023, 08:45:05 UTC |
35e2e30 | Lars Bilke | 03 May 2023, 15:41:13 UTC | [eve] Updated to toolchain 2022b. Serial config working. | 22 May 2023, 08:45:05 UTC |
1a7fea0 | Lars Bilke | 22 May 2023, 07:48:02 UTC | [T] Relax some tolerances. May fix https://gitlab.opengeosys.org/ufz-bgr/hpc/docs/-/issues/47 | 22 May 2023, 07:48:02 UTC |
a5b43bd | ChaofanChen | 22 May 2023, 07:26:16 UTC | [Doc/Water] Update the limits of the function and the units. | 22 May 2023, 07:26:16 UTC |
7bdbbb5 | ChaofanChen | 22 May 2023, 07:04:39 UTC | [MPL/Water] Update comments on the pressure boundaries for saturation properties. | 22 May 2023, 07:04:39 UTC |
6555401 | Dmitri Naumov | 17 April 2023, 09:35:11 UTC | [T] Slightly relax ctest tolerances | 21 May 2023, 20:51:08 UTC |
6448ef4 | Dmitry Yu. Naumov | 21 May 2023, 19:23:22 UTC | Merge branch 'WellboreSimulator_EOS' into 'master' WellboreSimulator-EOS: water vapour density and enthalpy in region4 See merge request ogs/ogs!4524 | 21 May 2023, 19:23:22 UTC |
47a56e2 | Dmitry Yu. Naumov | 21 May 2023, 19:12:07 UTC | Merge branch 'minor_impr' into 'master' Apply clang-format to some files in MeshLib See merge request ogs/ogs!4612 | 21 May 2023, 19:12:07 UTC |
d472a3e | Wenqing Wang | 17 May 2023, 12:41:41 UTC | [MeshLib] clang-format for some files | 19 May 2023, 14:29:16 UTC |
c3eb5b3 | Wenqing Wang | 17 May 2023, 12:35:59 UTC | [MeshLib] Removed unnecessary path in some includes | 19 May 2023, 14:28:24 UTC |
79b786b | ChaofanChen | 14 April 2023, 14:59:48 UTC | [UnitTest/water] water vapor saturation enthalpy in region4. | 17 May 2023, 13:26:00 UTC |
b6ebb00 | ChaofanChen | 14 April 2023, 14:59:30 UTC | [UnitTest/water] water vapor saturation density in region4. | 17 May 2023, 13:26:00 UTC |
84301de | ChaofanChen | 14 April 2023, 14:50:32 UTC | [MPL/Water] Add water vapor saturation enthalpy in region4. | 17 May 2023, 13:26:00 UTC |
f25b865 | ChaofanChen | 14 April 2023, 14:49:31 UTC | [MPL/Water] Add water vapor saturation density in region4. | 17 May 2023, 13:26:00 UTC |
4ac5bd8 | ChaofanChen | 14 April 2023, 14:47:57 UTC | [Doc] Add EOS of water vapor saturation density and enthlapy docu. | 17 May 2023, 13:26:00 UTC |
99a2201 | ChaofanChen | 14 April 2023, 14:46:59 UTC | [UnitTest/Gibbs] add unit test for Gibbs free energy in region2. | 17 May 2023, 13:26:00 UTC |
fb0c18c | ChaofanChen | 14 April 2023, 14:46:12 UTC | [MaterialLib] Add Gibbs free energy calculation in region2. | 17 May 2023, 13:26:00 UTC |
ff3f642 | Dmitry Yu. Naumov | 16 May 2023, 21:05:26 UTC | Merge branch 'minor_impr' into 'master' Apply clang-format to files in MeshLib/MeshEditing See merge request ogs/ogs!4609 | 16 May 2023, 21:05:26 UTC |
df53879 | Wenqing Wang | 16 May 2023, 15:44:56 UTC | [MeshLib/MeshEditing] Removed unnecessary path in some includes | 16 May 2023, 15:54:34 UTC |
be24fce | Wenqing Wang | 16 May 2023, 15:53:29 UTC | [MeshLib/MeshEditing] clang-format | 16 May 2023, 15:53:29 UTC |
eec8a0b | Lars Bilke | 16 May 2023, 06:30:34 UTC | Merge branch 'FixNetCDFDataExplorerBug' into 'master' Fix bug in NetCdf reader in DataExplorer See merge request ogs/ogs!4606 | 16 May 2023, 06:30:34 UTC |
f47e4bd | Tom Fischer | 15 May 2023, 18:37:03 UTC | Merge branch 'ReplaceDynamicSpan' into 'master' Replace BaseLib::DynamicSpan with std::span See merge request ogs/ogs!4605 | 15 May 2023, 18:37:03 UTC |
cf5406a | Thomas Fischer | 15 May 2023, 06:20:39 UTC | [App/DE/VtkVis] Don't destroy current mesh in destructor Storing the mesh as unique_ptr destroys the mesh after NecCdfConfigureDialog goes out of scope. Now, the unique_ptr is released in the destructor. The owner of the data is now responsible for clean up the mesh. | 15 May 2023, 06:20:39 UTC |
41a8f02 | Dmitri Naumov | 12 May 2023, 16:01:41 UTC | [T/NL] Move function for tests into Tests/NumLib Includes optimizations on vector construction in ReferenceElement. Creation of span with fixed size extent is used in the tests/ReferenceElementUtils. | 12 May 2023, 16:11:47 UTC |
12b7136 | Dmitri Naumov | 12 May 2023, 15:02:00 UTC | [BL] Remove unnecessary DynamicSpan The STL's std::span is used instead. | 12 May 2023, 16:11:47 UTC |
2de1975 | Dmitri Naumov | 12 May 2023, 15:01:06 UTC | [NL] Replace BL::DynamicSpan with std::span | 12 May 2023, 16:11:47 UTC |
12d959a | Dmitri Naumov | 12 May 2023, 13:04:03 UTC | [MatL] Replace BaseLib::DynamicSpan with std::span | 12 May 2023, 16:11:47 UTC |
2933d54 | Dmitry Yu. Naumov | 12 May 2023, 13:19:02 UTC | Merge branch 'RasterImprovements' into 'master' [GeoLib::Raster] Add default {copy, move} {constructor, assignment operator} See merge request ogs/ogs!4599 | 12 May 2023, 13:19:02 UTC |
886ea6f | Thomas Fischer | 11 May 2023, 11:51:30 UTC | [GL/Raster] Clang format | 12 May 2023, 12:19:07 UTC |
d5768b4 | Thomas Fischer | 11 May 2023, 11:50:45 UTC | [T/GL] Update raster test using comparison ops. | 12 May 2023, 12:19:07 UTC |
6406c69 | Dmitry Yu. Naumov | 12 May 2023, 11:24:04 UTC | Merge branch 'PLLC_optim' into 'master' Updated PLLC implementation for performance and accuracy improvements. See merge request ogs/ogs!4603 | 12 May 2023, 11:24:04 UTC |
3a05992 | Thomas Fischer | 11 May 2023, 11:50:01 UTC | [GL/Raster] Comparison operator for RasterHeader and Raster | 12 May 2023, 11:03:58 UTC |
bd9916f | Thomas Fischer | 08 May 2023, 07:23:16 UTC | [T] Unit tests for constructors / assignment ops | 12 May 2023, 11:03:58 UTC |
3ad5964 | Thomas Fischer | 27 April 2023, 07:43:32 UTC | [GL/Raster] Create default copy-, move-constructor, copy-, and move-assignment operators | 12 May 2023, 11:03:58 UTC |
efd46f8 | Thomas Fischer | 27 April 2023, 07:36:49 UTC | [MeL/MeshGenerators/Raster2Mesh] Use Raster::data() | 12 May 2023, 11:03:58 UTC |
d51e457 | Thomas Fischer | 27 April 2023, 07:32:51 UTC | [App/DE/VtkVis/VtkRaster] Use Raster::data() | 12 May 2023, 11:03:58 UTC |
a3d5885 | Thomas Fischer | 27 April 2023, 07:30:50 UTC | [App/IO/AsciiRasterInterface] Use Raster::data() md | 12 May 2023, 11:03:58 UTC |
2cd6199 | Thomas Fischer | 27 April 2023, 07:29:16 UTC | [GL/Raster] Use std::vector instead of raw C array | 12 May 2023, 11:03:58 UTC |
37e3bcd | Thomas Nagel | 11 May 2023, 13:50:51 UTC | Updated PLLC implementation for performance and accuracy improvements. | 12 May 2023, 09:35:15 UTC |
dbfc268 | Tom Fischer | 11 May 2023, 19:10:12 UTC | Merge branch 'SmallFixes' into 'master' Independent small fixes after gcc-13 and petsc-3.19 update. See merge request ogs/ogs!4602 | 11 May 2023, 19:10:12 UTC |
0458a0e | Dmitry Yu. Naumov | 11 May 2023, 14:16:12 UTC | Merge branch 'MaterialIDBasedOutput' into 'master' Output submesh specified by material ids See merge request ogs/ogs!4594 | 11 May 2023, 14:16:12 UTC |
e9829cf | Dmitri Naumov | 11 May 2023, 13:34:12 UTC | [MaL] Use PETSC_NULLPTR Replacing deprecated PETSC_NULL since petsc version 3.19. | 11 May 2023, 13:35:13 UTC |
49bf62a | Dmitri Naumov | 11 May 2023, 13:33:14 UTC | [PL] Missing includes for function and mutex | 11 May 2023, 13:35:13 UTC |
ec364d6 | Wenqing Wang | 10 May 2023, 14:27:14 UTC | [Warning] Fixed a 'redundant move' warning | 11 May 2023, 13:35:13 UTC |
8e75a86 | Thomas Fischer | 05 May 2023, 06:35:32 UTC | Mv splitMaterialIdString() from ProjectData to BaseLib/StringTools | 11 May 2023, 09:30:53 UTC |
150a287 | Thomas Fischer | 05 May 2023, 06:09:36 UTC | [PL/Output] Fwd decl. of MeL::Mesh | 11 May 2023, 09:30:53 UTC |
3def4ec | Thomas Fischer | 04 May 2023, 10:42:27 UTC | [docu] Docu for specifying the material ids for output | 11 May 2023, 09:30:53 UTC |
4452b79 | Thomas Fischer | 08 May 2023, 07:39:01 UTC | [T] Update patched project file reference | 11 May 2023, 09:30:53 UTC |
ada8690 | Thomas Fischer | 04 May 2023, 09:49:27 UTC | [T] ctest for material ID based output | 11 May 2023, 09:30:53 UTC |
b04565c | Thomas Fischer | 04 May 2023, 08:54:18 UTC | [T] Specify material ID based submesh for output | 11 May 2023, 09:30:53 UTC |
d48a9af | Thomas Fischer | 04 May 2023, 08:53:23 UTC | [T] Add material IDs to mesh | 11 May 2023, 09:30:53 UTC |
f9e6b31 | Thomas Fischer | 04 May 2023, 06:23:01 UTC | [T/MeL] Unit tests createMaterialIDsBasedSubMesh() | 11 May 2023, 09:30:53 UTC |
853f48e | Thomas Fischer | 03 May 2023, 13:41:49 UTC | [T/MeL] Unit tests getMeshElementsForMaterialIDs() | 11 May 2023, 09:30:52 UTC |
0ca39d4 | Thomas Fischer | 28 April 2023, 12:41:44 UTC | [PL/Output] Read material_ids from prj file and construct mesh | 11 May 2023, 09:30:52 UTC |