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28 March 2024, 10:48:24 UTC
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Revision Author Date Message Commit Date
3fa4215 Tom Fischer 09 October 2023, 06:36:38 UTC Merge branch 'UpdatePETScSolverOutput' into 'master' PETSc: Amend used norm type of solver to output message See merge request ogs/ogs!4756 09 October 2023, 06:36:38 UTC
2ca8d0f Thomas Fischer 04 September 2023, 08:38:15 UTC [MathLib] Output norm type of PETSc solver 09 October 2023, 06:35:57 UTC
b8e243a Dmitry Yu. Naumov 06 October 2023, 09:04:14 UTC Merge branch 'THM_FixPrevIceVolumeFraction' into 'master' [PL/THM] Explicitly set phi_fr_prev See merge request ogs/ogs!4744 06 October 2023, 09:04:14 UTC
69ca768 Dmitri Naumov 04 October 2023, 08:29:10 UTC [T/THM] Heat transport in stationary flow w/ ice Presence of ice phase at slightly positive temperatures with shallow sigmoid function for ice phase should not affect the results much but only for amount of ice formed. In the simulation the initial ice volume fraction is 0.0379... . Displacement and stress are read from previous simulation's steady-state result. Incorrect update of phi_fr_prev causes pressure to drop significantly in the first step, which is unexpected, since everything is in equilibrium. Temperature load starts only after 10 steps at t=10000s. 05 October 2023, 13:14:07 UTC
277410a Dmitri Naumov 26 September 2023, 09:59:20 UTC [PL/THM] Explicitly set phi_fr_prev, don't update The phi_fr_prev variable initialization was not correct. Setting it explicitly avoids any non-initialized states. 04 October 2023, 16:43:36 UTC
d846de4 Tom Fischer 03 October 2023, 17:15:58 UTC Merge branch 'FixConstructMeshesFromGeometryBulkElementIds' into 'master' Use bulk element's id for boundary element construction Closes #3430 See merge request ogs/ogs!4751 03 October 2023, 17:15:58 UTC
93f12dc Dmitry Yu. Naumov 03 October 2023, 16:32:57 UTC Merge branch 'FixPETScMeshComponenteMapBug' into 'master' Bug fix for DOF index calculation in parallel ogs version See merge request ogs/ogs!4738 03 October 2023, 16:32:57 UTC
b5dcba5 Dmitri Naumov 03 October 2023, 13:51:27 UTC [T/TRM] Add boundary mesh output to vtkdiff checks 03 October 2023, 13:51:27 UTC
21ce236 Thomas Fischer 19 September 2023, 12:18:23 UTC [PL/Assembly] Negative row indices are handled later on 03 October 2023, 12:11:37 UTC
875817d Thomas Fischer 19 September 2023, 10:37:56 UTC [NL/DOF] Forward returned nop value instead of modifying 03 October 2023, 12:11:37 UTC
9529d34 Thomas Fischer 22 September 2023, 12:35:24 UTC [T/TRM] Add second output config 03 October 2023, 12:11:37 UTC
e58aa28 Thomas Fischer 22 September 2023, 12:33:41 UTC [T/TRM/LinearMechanics] Use meshes instead of geometry 03 October 2023, 12:11:37 UTC
a23c038 Dmitri Naumov 28 September 2023, 14:39:47 UTC [MGTL] Fix name of a public class member 02 October 2023, 22:02:36 UTC
62300af Dmitri Naumov 28 September 2023, 14:40:41 UTC [MGTL] Remove unused getMesh from the interface 02 October 2023, 22:02:36 UTC
242f013 Dmitri Naumov 28 September 2023, 14:39:47 UTC [MGTL] Fix name of a public class member 02 October 2023, 22:02:36 UTC
b6a3c74 Dmitri Naumov 28 September 2023, 12:52:08 UTC [MGTL] Extract common serial/petsc case code 02 October 2023, 22:02:36 UTC
9ca37af Dmitri Naumov 28 September 2023, 14:18:16 UTC [MGTL] Pass element's id to created boundary elems This ensures correct bulk_node_ids map 02 October 2023, 22:02:36 UTC
d37b6ae Dmitri Naumov 29 September 2023, 11:22:26 UTC [T/MGTL] Construct meshes from geometry square 02 October 2023, 22:02:36 UTC
ccbca34 Lars Bilke 29 September 2023, 12:24:40 UTC [cmake] Fixed index bug in AddTest when using vtkdiff-mesh. 02 October 2023, 22:02:36 UTC
a6c00c5 Dmitry Yu. Naumov 02 October 2023, 15:59:38 UTC Merge branch 'timeloop-refactorings' into 'master' Small refactorings of the timeloop See merge request ogs/ogs!4748 02 October 2023, 15:59:38 UTC
b132260 Christoph Lehmann 28 September 2023, 12:47:37 UTC [PL] Removed unused method 02 October 2023, 14:41:31 UTC
4ef9479 Christoph Lehmann 28 September 2023, 12:45:52 UTC [PL] Extracted preOutputInitialConditions() method 02 October 2023, 14:41:31 UTC
f6a32cd Christoph Lehmann 28 September 2023, 12:25:50 UTC [PL] Changed lambda to separate method 02 October 2023, 14:18:41 UTC
4037b59 Christoph Lehmann 28 September 2023, 12:10:57 UTC [PL] Added documentation 02 October 2023, 14:18:41 UTC
5f2b6db Christoph Lehmann 28 September 2023, 11:41:35 UTC [PL] Renamed method doNonlinearIteration() ... to preTsNonlinearSolvePostTs() 02 October 2023, 14:18:41 UTC
e948d10 Dmitri Naumov 02 October 2023, 09:11:24 UTC Remove spdlog dependency for Geo and MathLibs The spdlog is public in BaseLib and repeating it in on BaseLib dependent libraries is not necessary and violates the ODR. 02 October 2023, 11:00:27 UTC
3abcab8 Dmitry Yu. Naumov 29 September 2023, 14:43:23 UTC Merge branch 'UseMaterialSpatialDistributionMapAsValue' into 'master' Use MaterialSpatialDistributionMap as value See merge request ogs/ogs!4745 29 September 2023, 14:43:23 UTC
1585744 Lars Bilke 29 September 2023, 13:25:51 UTC Merge branch 'bundled-fmt' into 'master' Use bundled fmt from spdlog See merge request ogs/ogs!4750 29 September 2023, 13:25:51 UTC
3e5b2ee Dmitri Naumov 27 September 2023, 15:25:34 UTC [PL] Use MaterialSpatialDistr.Map as value The structure is small and does not require to be stored on heap. 29 September 2023, 12:42:33 UTC
bc053d4 Lars Bilke 29 September 2023, 11:58:26 UTC [cmake gcc 13.2.1 add -Wno-stringop-overflow. 29 September 2023, 11:58:26 UTC
ed93674 project_120_bot2 29 September 2023, 10:31:02 UTC [versions] Updated cpm cache info. 29 September 2023, 10:53:31 UTC
0ea50cf Lars Bilke 29 September 2023, 09:58:54 UTC [guix] Use bundled fmt. 29 September 2023, 10:53:31 UTC
c813f3a Lars Bilke 29 September 2023, 09:58:29 UTC Use bundled fmt in code. 29 September 2023, 10:53:31 UTC
fe972b8 Lars Bilke 28 September 2023, 15:21:19 UTC [cmake] Use bundled fmt from spdlog. 29 September 2023, 10:53:31 UTC
3f62408 Dmitry Yu. Naumov 29 September 2023, 08:39:06 UTC Merge branch 'rename-is-linear' into 'master' Renamed tag <is_linear> to <linear> See merge request ogs/ogs!4747 29 September 2023, 08:39:06 UTC
67b83b9 Christoph Lehmann 28 September 2023, 10:40:07 UTC [T/CT] Updated paths sed -i -e 's/is_linear/linear/g' ProcessLib/ComponentTransport/Tests.cmake 29 September 2023, 05:32:24 UTC
27fd2fa Christoph Lehmann 28 September 2023, 08:34:39 UTC [T] Renamed directories containing is_linear for f in `find . -type d -name '*is_linear*'`; do git ls-files --error-unmatch "$f" &>/dev/null || continue; tgt="${f//is_linear/linear}"; mkdir "$tgt"; git mv "$f"/* "$tgt" || break; done 29 September 2023, 05:32:24 UTC
625fff0 Christoph Lehmann 28 September 2023, 08:31:25 UTC [Doc] Renamed a file containing is_linear for f in `find . -type f -name '*is_linear*'`; do git ls-files --error-unmatch "$f" &>/dev/null || continue; git mv "$f" "${f//is_linear/linear}" || break; done 29 September 2023, 05:32:24 UTC
b44d2f7 Christoph Lehmann 28 September 2023, 08:10:04 UTC [T, Doc] Renamed is_linear ag -l -s 'is_linear' Documentation/ Tests/Data/ | xargs sed -i -e 's/is_linear/linear/g' 29 September 2023, 05:32:24 UTC
9c5be18 Christoph Lehmann 28 September 2023, 08:05:04 UTC [PL/CT] Renamed is_linear ag -l '"is_linear"' | xargs sed -i -e 's/"is_linear"/"linear"/' ag -l -s '__is_linear' | xargs sed -i -e 's/__is_linear/__linear/' 29 September 2023, 05:32:13 UTC
68cb163 Lars Bilke 28 September 2023, 09:46:31 UTC Merge branch 'fix-eigen-unsupported-build' into 'master' Fix build if not using unsupported Eigen parts Closes #3431 See merge request ogs/ogs!4746 28 September 2023, 09:46:31 UTC
2e68652 Dmitry Yu. Naumov 28 September 2023, 08:26:38 UTC Merge branch 'UseMediaInSmallDeformation' into 'master' SmallDeformation uses media for solid density evaluation See merge request ogs/ogs!4739 28 September 2023, 08:26:38 UTC
8602b8c Christoph Lehmann 28 September 2023, 07:20:55 UTC [MaL] Fix build if not using unsupported Eigen parts 28 September 2023, 07:20:55 UTC
753d732 Dmitri Naumov 22 September 2023, 13:43:02 UTC [T/M] Replace group-parameter by multiple media 27 September 2023, 15:21:04 UTC
9a445b6 Dmitri Naumov 22 September 2023, 12:55:24 UTC [T/TRM] Slightly relax ctest's tolerance 27 September 2023, 15:21:04 UTC
af1f0a4 Dmitri Naumov 21 September 2023, 16:14:20 UTC [T/M] Renumber resulting mesh's material ids This avoids mentioning of the material id 6 in the medium definition. 27 September 2023, 15:21:04 UTC
0733759 Dmitri Naumov 19 September 2023, 17:22:33 UTC [doc] Fix links in SmallDeformationNonlocal pcs 27 September 2023, 15:21:04 UTC
9db1eac Dmitri Naumov 19 September 2023, 17:08:27 UTC [T/M] Automatic formatting of the notebook 27 September 2023, 15:21:03 UTC
224f01d Dmitri Naumov 19 September 2023, 17:03:31 UTC [T/M] Update python notebook adding media 27 September 2023, 15:21:03 UTC
5498656 Dmitri Naumov 19 September 2023, 17:02:12 UTC [T/M] Add media ids for some projects This is specific to the project and is easier done by hand than a script. 27 September 2023, 15:21:03 UTC
c212897 Dmitri Naumov 19 September 2023, 12:07:30 UTC [T/M] Update all SMALL_DEFORMATION project files Adding media description and using constant density property where possible. In other cases refer to the existing parameter. 27 September 2023, 15:21:03 UTC
ac80233 Dmitri Naumov 18 September 2023, 14:58:28 UTC [PL/SD] Use media replacing solid_density The evaluation of solid density is moved to the updateConstitutiveRelations. 27 September 2023, 15:21:03 UTC
5117174 Dmitri Naumov 17 September 2023, 11:05:03 UTC [PL/SD] Pass media map to process creation 27 September 2023, 15:16:28 UTC
1747ca8 Dmitry Yu. Naumov 27 September 2023, 12:42:56 UTC Merge branch 'rtp-compute-only-upon-timestep-change' into 'master' RTP Acceleration Step 2: Compute linear solver only upon timestep change See merge request ogs/ogs!4730 27 September 2023, 12:42:56 UTC
cf28ca6 Lars Bilke 27 September 2023, 10:03:56 UTC [web] Made installing master pip package more prominent. 27 September 2023, 10:03:56 UTC
c891084 Lars Bilke 26 September 2023, 11:13:40 UTC [T] Skip web site generation on performance_measurements.ipynb. 26 September 2023, 11:13:40 UTC
8c2d68c Lars Bilke 26 September 2023, 11:12:34 UTC [ctest,cmake] Added option SKIP_WEB for NotebookTest(). 26 September 2023, 11:12:34 UTC
20694a6 Christoph Lehmann 16 September 2023, 09:14:00 UTC [T] Added Jupyter notebook test 25 September 2023, 15:12:42 UTC
c344abe Christoph Lehmann 16 September 2023, 09:15:11 UTC [Doc] Added documentation 25 September 2023, 15:06:55 UTC
40df55c Christoph Lehmann 16 September 2023, 09:14:53 UTC [Doc] Extended documentation of <is_linear> 25 September 2023, 15:06:55 UTC
36271a2 Christoph Lehmann 16 September 2023, 09:14:17 UTC [T] Added tests 25 September 2023, 15:06:55 UTC
6c98a63 Christoph Lehmann 16 September 2023, 09:18:13 UTC [NL] Picard: Linear solver computes only if necessary 25 September 2023, 15:06:55 UTC
8f7440e Christoph Lehmann 16 September 2023, 09:19:24 UTC [PL/CT] Provide information whether linear solver needs to compute 25 September 2023, 15:06:55 UTC
0a6a823 Christoph Lehmann 16 September 2023, 09:18:59 UTC [NL] Provide information if linear solver needs to compute. 25 September 2023, 15:06:55 UTC
6ad22e5 Christoph Lehmann 16 September 2023, 09:15:28 UTC [MaL] Separated compute() and solve() step of Eigen linear solvers 25 September 2023, 15:06:55 UTC
6081637 Lars Bilke 22 September 2023, 12:30:32 UTC Merge branch 'update-guix' into 'master' Update guix and make PETSc container runnable on Juwels See merge request ogs/ogs!4726 22 September 2023, 12:30:32 UTC
98d08d8 Lars Bilke 22 September 2023, 06:45:59 UTC Merge branch 'eve-ctest-parallel-level' into 'master' [eve] Limit ctest to 4 concurrent runs on eve frontends. See merge request ogs/ogs!4742 22 September 2023, 06:45:59 UTC
a7d69a6 Lars Bilke 21 September 2023, 09:02:23 UTC [eve] Limit ctest to 4 concurrent runs on eve frontends. 21 September 2023, 09:02:23 UTC
76090b3 Dmitry Yu. Naumov 21 September 2023, 07:41:40 UTC Merge branch 'SmallFixes' into 'master' Small fixes See merge request ogs/ogs!4734 21 September 2023, 07:41:40 UTC
7999a17 Lars Bilke 19 September 2023, 12:12:45 UTC [web] pip install instructions windows. 19 September 2023, 12:12:45 UTC
308c846 Lars Bilke 15 September 2023, 09:20:12 UTC [ci,guix] --no-substitutes should minimize 'write_to_session_record_port' errors. 18 September 2023, 14:51:58 UTC
966e5ee Lars Bilke 15 September 2023, 09:03:01 UTC Revert "[guix] Added package openmpi-pmix." This reverts commit f2b197855fe940b167e76b56378deed357dc6f7e. Is now integrated into upstream guix, see https://git.savannah.gnu.org/cgit/guix.git/commit/?id=55da0930e30e0ee1b3da1b9aee5851e9ccfca32c 18 September 2023, 14:51:58 UTC
f64ea38 Lars Bilke 11 September 2023, 08:59:24 UTC [ci,guix] Remove time-machine command. 18 September 2023, 14:51:58 UTC
fb0ed50 Lars Bilke 08 September 2023, 19:52:18 UTC [ci,guix] Skip hdf5 tests. 18 September 2023, 14:51:58 UTC
1cb55b2 Lars Bilke 08 September 2023, 12:34:50 UTC [ci] Some guix version output. 18 September 2023, 14:51:58 UTC
671a929 Lars Bilke 07 September 2023, 12:34:29 UTC [guix] Added package openmpi-pmix. Then you can build portable (tested eve end juwels) container with: guix pack -L $PWD/.guix/modules --fallback --without-tests=hdf5-parallel-openmpi --with-input=openmpi=openmpi-pmix -RR --format=squashfs bash ogs-petsc On Juwels you need to start with `srun --mpi=mspmix ...` 18 September 2023, 14:51:58 UTC
230e42c Lars Bilke 05 September 2023, 06:29:33 UTC [guix] Fix syntax for configure-flags append. 18 September 2023, 14:51:58 UTC
66c2b8e Lars Bilke 04 September 2023, 11:41:30 UTC [guix] Fix naming of eve container. 18 September 2023, 14:51:58 UTC
0099563 Lars Bilke 04 September 2023, 11:22:06 UTC [ci,guix] Update guix. 18 September 2023, 14:51:58 UTC
e6c8a79 Dmitri Naumov 16 September 2023, 20:09:45 UTC [PL] Spelling 17 September 2023, 20:41:23 UTC
0a7e21d Dmitri Naumov 15 September 2023, 21:22:26 UTC [PL/TRM] Remove unnecessary fwd-declaration 17 September 2023, 20:41:23 UTC
ff85716 Dmitri Naumov 15 September 2023, 21:16:17 UTC [GL] Use algorithm replacing for-loop 17 September 2023, 20:41:23 UTC
fa8670b Dmitri Naumov 15 September 2023, 20:49:51 UTC [PL/LIE] Use boolean 'or' replacing bit-wise 'or' 17 September 2023, 20:41:23 UTC
826829c Dmitri Naumov 15 September 2023, 20:48:57 UTC [MPL] Default-initialize pointers These are set later after object's construction. 17 September 2023, 20:41:23 UTC
99e75ad Dmitri Naumov 15 September 2023, 20:37:11 UTC [TES] Use constexpr for static const values Moving some of the variables into translation unit where they are used. The variables are renamed as they are no longer member variables. Define public ones directly in the header. 17 September 2023, 20:41:23 UTC
03a824c Dmitri Naumov 15 September 2023, 20:37:41 UTC [TES] Initialize members with nan for safety 17 September 2023, 20:41:23 UTC
72881e5 Dmitri Naumov 15 September 2023, 20:34:24 UTC [CL] Use std::vector replacing raw pointer The raw pointer might be not deallocated. 17 September 2023, 20:41:23 UTC
e649c35 Dmitri Naumov 15 September 2023, 19:09:44 UTC [MTL] Use ids view_closure simplifying code 17 September 2023, 20:41:23 UTC
fe04c97 Dmitri Naumov 15 September 2023, 19:07:45 UTC [GL] Reduce variable scope 17 September 2023, 20:41:23 UTC
c5b1684 Dmitri Naumov 15 September 2023, 11:23:51 UTC [T/LIE] Slightly relax ctest's tolerance 17 September 2023, 20:41:23 UTC
c34b8b0 Dmitri Naumov 12 September 2023, 18:51:47 UTC [PL] Reduce constructor's argument list Both time steps are created from the timestepper, so this construction is moved inside the ProcessData. This resolves the warning about the time step not being passed by reference, are removes the unnecessary std::move in the caller for the time step. 17 September 2023, 20:41:23 UTC
d5684b2 Dmitri Naumov 14 September 2023, 20:54:40 UTC [PL] Disable unused ctor and disable assignments 17 September 2023, 20:41:23 UTC
87649ee Dmitri Naumov 14 September 2023, 12:24:06 UTC [MatL/MFront] Add actual value to the error Small reformatting if string literals. 17 September 2023, 20:41:23 UTC
c6a9c49 Dmitri Naumov 13 September 2023, 21:41:54 UTC [PL/LIE] Remove unused include 17 September 2023, 20:41:23 UTC
fd5f4f4 Dmitri Naumov 13 September 2023, 21:41:33 UTC [PL/LIE] Replace for-loop with transform algorithm 17 September 2023, 20:41:23 UTC
2febec6 Dmitri Naumov 12 September 2023, 20:41:00 UTC [PL] Pass name as const-ref on construction The 'name' in process construction is also used after the process construction and so it can not be moved anyway. Taking it by const-ref avoids an extra copy here (and silences a cppcheck warning). 17 September 2023, 20:41:23 UTC
cde2e29 Dmitri Naumov 12 September 2023, 19:14:16 UTC Improve const-correctness 17 September 2023, 20:41:23 UTC
03b543e Dmitri Naumov 12 September 2023, 18:52:57 UTC Disable gcc-13.2.1 specific warnings These are dangling-reference, array-bounds, and stringop-overread. This is the same as the exception for gcc-13.1.1. 17 September 2023, 20:39:48 UTC
332e7d0 Dmitri Naumov 12 September 2023, 14:33:21 UTC [NL] Unify function names in decl. and def. 17 September 2023, 13:23:52 UTC
f1c341e Dmitri Naumov 12 September 2023, 14:05:42 UTC [GL] Remove unnecessary assignments The 'next' value is not used afterwards. 15 September 2023, 11:24:30 UTC
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