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| Revision | Author | Date | Message | Commit Date |
|---|---|---|---|---|
| 485499d | Christoph Lehmann | 15 October 2023, 07:54:00 UTC | Merge branch 'vtkdiff-field-data' into 'master' Add a test case using vtkdiff for field data See merge request ogs/ogs!4760 | 15 October 2023, 07:54:00 UTC |
| c78316d | Christoph Lehmann | 13 October 2023, 09:02:23 UTC | [scr] Updated vtkdiff hash after GitHub PR merge | 15 October 2023, 07:53:46 UTC |
| 95f5149 | Christoph Lehmann | 11 October 2023, 08:39:52 UTC | [T] Added test with nontrivial IP data field | 15 October 2023, 07:53:46 UTC |
| 1402565 | Lars Bilke | 13 October 2023, 11:49:45 UTC | Revert accidentally increased PETSc version... | 13 October 2023, 11:49:45 UTC |
| 41885ee | Lars Bilke | 13 October 2023, 11:00:27 UTC | [nb] Added (dummy) frontmatter on check_point_cloud.ipynb. | 13 October 2023, 11:00:27 UTC |
| f644ae8 | Lars Bilke | 13 October 2023, 08:56:21 UTC | [nb] Added (dummy) frontmatter on ModCamClay_TestIsotrop.ipynb. | 13 October 2023, 08:56:21 UTC |
| f8484b6 | Lars Bilke | 13 October 2023, 08:55:13 UTC | [ci,nb] Fixed testrunner for failed notebook runs. | 13 October 2023, 08:55:13 UTC |
| 2169204 | Lars Bilke | 13 October 2023, 06:43:09 UTC | Merge branch 'nb-testrunnere' into 'master' [ci,nb] Refactored notebook testrunner. See merge request ogs/ogs!4762 | 13 October 2023, 06:43:09 UTC |
| 461d280 | Lars Bilke | 12 October 2023, 12:11:05 UTC | [ci] Add check=True to subprocess.run. | 13 October 2023, 06:29:40 UTC |
| 6d473c9 | Lars Bilke | 12 October 2023, 11:27:15 UTC | [ci] On web only pipelines run notebook benchmarks only. | 13 October 2023, 06:29:40 UTC |
| cba134d | Lars Bilke | 12 October 2023, 10:50:03 UTC | [nb] Removed nb2hugo dependency. | 13 October 2023, 06:29:40 UTC |
| def7173 | Lars Bilke | 12 October 2023, 09:47:25 UTC | [ci,nb] Check for first markdown cell. | 13 October 2023, 06:29:40 UTC |
| 28ce66f | Lars Bilke | 12 October 2023, 09:31:56 UTC | [nb] Format notebooks with black. | 13 October 2023, 06:29:40 UTC |
| ef617dd | Lars Bilke | 12 October 2023, 09:31:20 UTC | [nb] Update notebooks to use regular toml frontmatter. | 13 October 2023, 06:29:39 UTC |
| 3f7236b | Lars Bilke | 12 October 2023, 09:20:54 UTC | [web] Update docs for toml frontmatter in notebooks. | 13 October 2023, 06:29:39 UTC |
| 2cef617 | Lars Bilke | 12 October 2023, 09:09:11 UTC | [ci,nb] Refactored notebook testrunner. nb2hugo not required anymore. special frontmatter in ipynb notebooks not required anymore, use regular toml-frontmatter | 13 October 2023, 06:27:57 UTC |
| 0be7f58 | Dmitry Yu. Naumov | 12 October 2023, 19:55:31 UTC | Merge branch 'fix-is-linear-output-off-by-one' into 'master' Fixing off-by-one-timestep error in OGS's output when <linear> is used. See merge request ogs/ogs!4749 | 12 October 2023, 19:55:31 UTC |
| 417f887 | Christoph Lehmann | 29 September 2023, 07:56:19 UTC | [T] Added check to notebook | 11 October 2023, 18:17:39 UTC |
| 697fa32 | Christoph Lehmann | 28 September 2023, 11:39:15 UTC | [PL] Added preOutput() hook | 11 October 2023, 18:17:39 UTC |
| fdb2dbc | Christoph Lehmann | 29 September 2023, 06:46:00 UTC | [PL] Added method isOutputStep() | 11 October 2023, 18:17:39 UTC |
| 37134cf | Christoph Lehmann | 29 September 2023, 06:46:24 UTC | [PL/TL] Added preOutputForAllProcesses() | 11 October 2023, 18:17:39 UTC |
| fb3409b | Christoph Lehmann | 29 September 2023, 06:02:53 UTC | [PL/TL] Added comment | 11 October 2023, 18:16:45 UTC |
| 10a5c45 | Christoph Lehmann | 29 September 2023, 05:36:51 UTC | [PL/TL] Added preOutput callbacks to IC output | 11 October 2023, 18:16:45 UTC |
| 9e3ecb2 | Christoph Lehmann | 09 October 2023, 07:45:36 UTC | [T] Updated reference files ... to add [Am-243]FlowRate | 11 October 2023, 18:16:45 UTC |
| 1dbf15c | Christoph Lehmann | 04 October 2023, 07:51:01 UTC | [T] Added Am-243 output and tests | 11 October 2023, 18:16:45 UTC |
| 1eeedb9 | Dmitry Yu. Naumov | 11 October 2023, 17:07:09 UTC | Merge branch 'bgr_cl_benchmark' into 'master' [RT/Docu] add a reactive transport benchmark of co2 injection See merge request ogs/ogs!4729 | 11 October 2023, 17:07:09 UTC |
| 1bca3ab | Lars Bilke | 11 October 2023, 16:20:50 UTC | [T] notebook spelling fixes. | 11 October 2023, 16:20:50 UTC |
| 89eb9f8 | Lars Bilke | 11 October 2023, 16:17:08 UTC | [T] markdownlint notebook. | 11 October 2023, 16:17:08 UTC |
| 6596c6a | Lars Bilke | 11 October 2023, 16:13:16 UTC | [T] Converted notebook to markdown. | 11 October 2023, 16:15:56 UTC |
| c875cef | Shuang Chen | 13 September 2023, 08:13:44 UTC | documentation modified following the suggestions | 11 October 2023, 16:15:56 UTC |
| 45fb380 | Shuang Chen | 10 September 2023, 11:47:30 UTC | change the benchmark to jupyter format | 11 October 2023, 16:15:56 UTC |
| 20f1974 | Shuang Chen | 07 September 2023, 13:11:25 UTC | [RT/Docu] add a reactive transport benchmark of co2 injection trying to solve the spelling issue following the suggestion. | 11 October 2023, 16:15:55 UTC |
| abb8a73 | Lars Bilke | 11 October 2023, 12:49:59 UTC | Merge branch 'BHE_Meshing_Doc' into 'master' [Web] Tutorial of creating mesh with BHEs and enhanced notebook to web conversion See merge request ogs/ogs!4704 | 11 October 2023, 12:49:59 UTC |
| 71343c1 | Lars Bilke | 11 October 2023, 07:58:17 UTC | [web] Updated docs on notebook usage. | 11 October 2023, 12:47:00 UTC |
| 9260b46 | Lars Bilke | 11 October 2023, 07:32:03 UTC | [T] Convert to toml frontmatter. | 11 October 2023, 09:04:19 UTC |
| 73c6a32 | Lars Bilke | 11 October 2023, 07:31:43 UTC | [T,nb] Enforce toml frontmatter on notebooks, add checks. | 11 October 2023, 09:04:18 UTC |
| 7f738fb | Lars Bilke | 11 October 2023, 07:26:42 UTC | [T] DiscWithHole nb: fix TUBAF logo. | 11 October 2023, 09:04:18 UTC |
| d1bd958 | Lars Bilke | 10 October 2023, 15:25:55 UTC | [vale] Finally fixing the notebook, vale reports wrong line numbers! When using curly braces in code block, e.g. ```python gmsh.write(f"{out_dir}/{bhe_mesh_file_name}.msh") ``` It reports the above line instead of the actual error line... :-( | 10 October 2023, 15:25:55 UTC |
| 571f628 | Lars Bilke | 10 October 2023, 12:11:47 UTC | [T,web] ipynb notebooks to web conversion in build dir. Was done in source dir. Now is in line with jupytext notebooks. | 10 October 2023, 12:12:49 UTC |
| 8c6c1f0 | Lars Bilke | 10 October 2023, 11:41:10 UTC | [T] Renamed notebook for better url. | 10 October 2023, 12:12:49 UTC |
| fb1cb18 | Lars Bilke | 10 October 2023, 11:39:52 UTC | [T] Output ctest command (helpful for reproducing). | 10 October 2023, 12:12:48 UTC |
| e67432b | Lars Bilke | 10 October 2023, 11:36:56 UTC | [T] Fixed testrunner jupytext variable. | 10 October 2023, 12:12:48 UTC |
| 58b206e | Lars Bilke | 10 October 2023, 08:22:44 UTC | [ci] Update pre-commit and install go (vale) in pre-commit image. | 10 October 2023, 11:46:09 UTC |
| fd49c5f | Lars Bilke | 10 October 2023, 08:11:29 UTC | [web] Adapt bhe meshing tutorial download link. | 10 October 2023, 11:46:09 UTC |
| 0f7e783 | Lars Bilke | 10 October 2023, 08:01:40 UTC | [ci] Jupytext notebooks can be downloaded as ipynb from the website. | 10 October 2023, 11:46:09 UTC |
| b819410 | Lars Bilke | 10 October 2023, 08:00:20 UTC | [ci] Run vale directly and use official pre-commit hook. | 10 October 2023, 11:46:09 UTC |
| 7230ed3 | Lars Bilke | 10 October 2023, 06:47:53 UTC | [T, web] Add BHE tutorial to ctest. | 10 October 2023, 11:46:09 UTC |
| d664221 | Lars Bilke | 10 October 2023, 06:47:35 UTC | [T] Notebook testrunner for jupytext based web pages. | 10 October 2023, 11:46:09 UTC |
| 7cb7fa7 | Lars Bilke | 10 October 2023, 06:46:51 UTC | [cmake] Add PYTHON_PACKAGES argument to NotebookTest(). | 10 October 2023, 11:46:08 UTC |
| 78dbff0 | Lars Bilke | 10 October 2023, 06:42:24 UTC | [web] Mount release preset build dir for converted notebooks. | 10 October 2023, 11:46:08 UTC |
| 5690d5e | Lars Bilke | 10 October 2023, 06:40:30 UTC | [web] Use mount config also for static files configuration. | 10 October 2023, 09:11:32 UTC |
| 4aa6755 | Lars Bilke | 10 October 2023, 06:39:44 UTC | [web] Exclude md files prefixed with `notebook-`. | 10 October 2023, 09:11:32 UTC |
| 94098fa | Lars Bilke | 10 October 2023, 06:38:01 UTC | Notebooks on web page need to prefixed with `notebook-`. | 10 October 2023, 09:11:32 UTC |
| 079e664 | Lars Bilke | 09 October 2023, 13:08:59 UTC | Some vale fixes. | 10 October 2023, 09:11:32 UTC |
| 395d733 | Lars Bilke | 09 October 2023, 11:48:21 UTC | markdownlint. | 10 October 2023, 09:11:31 UTC |
| 0e17a22 | Lars Bilke | 09 October 2023, 11:46:11 UTC | [nb] Converted tutorial to markdown. pipx run jupytext --to md web/content/docs/tutorials/bhe_meshing/bhe_meshing.ipynb | 10 October 2023, 09:11:31 UTC |
| 59be4f5 | Haibing Shao | 03 October 2023, 13:34:11 UTC | Add tutorial of BHE meshing Add more explanation explanation and auto tag generation added fix spelling error Move files to new location minor changes add figure showing the mesh add meta data [docs] Renamed bhe meshing notebook and small syntax adaptions. fix doc according to reviewer's comments fix break line error break each sentence into separate lines add explanation of TagBS address reviewers' comments add explanation of version 2.2 additional explanation of (d-2) and vtu file conversion cell added new figures with explanation and separate text blocks added boreholes 1D png file added Upload New File minor changes Deleted previous excel file new excel file added deleted previous pictures new 3 pictures added new bhe_meshing file added deleted 2 previous pictures fix two spelling errors update to latest version correct file name and link move to tutorial folder add link to image fix the delimiter error add link to process description fix end of line error add 2 checks one more check add the conversion success message add another check on the mesh | 10 October 2023, 09:11:31 UTC |
| 3f1d32e | Lars Bilke | 27 September 2023, 08:10:58 UTC | [pre-commit] Ignore ipynb files on codespell-check. | 10 October 2023, 09:11:31 UTC |
| 97dbae5 | Dmitry Yu. Naumov | 09 October 2023, 15:08:46 UTC | Merge branch 'reduce-linear-solver-includes' into 'master' Reduce "scope" of linear solver includes See merge request ogs/ogs!4754 | 09 October 2023, 15:08:46 UTC |
| 4d7995d | Dmitry Yu. Naumov | 09 October 2023, 14:50:43 UTC | Merge branch 'DE_VoxelFault' into 'master' AddFaultToVoxelGrid added to DataExplorer See merge request ogs/ogs!4693 | 09 October 2023, 14:50:43 UTC |
| a5fc96e | Dmitry Yu. Naumov | 09 October 2023, 14:31:28 UTC | Merge branch 'FixHdfData' into 'master' Fix bug in XDMF interface: Add missing uchar data type Closes #3434 See merge request ogs/ogs!4755 | 09 October 2023, 14:31:28 UTC |
| 4284b6e | Tobias Meisel | 09 October 2023, 13:17:46 UTC | [MeL/IO/HDF] Save uchar as NATIVE_UCHAR | 09 October 2023, 13:22:40 UTC |
| aa3ad52 | Julian Heinze | 09 October 2023, 08:23:55 UTC | refactor on_(de)selectDataButton_pressed() - also updated for TranslateDataDialog | 09 October 2023, 13:15:56 UTC |
| 7036941 | Julian Heinze | 05 October 2023, 11:12:55 UTC | extract getSelectedObjects() | 09 October 2023, 13:15:56 UTC |
| 2fb9389 | Julian Heinze | 20 July 2023, 09:16:48 UTC | AddFaultToVoxelGrid added to DataExplorer | 09 October 2023, 13:15:48 UTC |
| e063682 | Dmitry Yu. Naumov | 09 October 2023, 09:15:23 UTC | Merge branch 'UpdatePETScSolverOutput' into 'master' PETSc: Amend used norm type of solver to output message See merge request ogs/ogs!4756 | 09 October 2023, 09:15:23 UTC |
| 1b4b095 | Christoph Lehmann | 06 October 2023, 10:52:56 UTC | [PL] Removed unneeded include | 09 October 2023, 08:17:38 UTC |
| 6625d92 | Christoph Lehmann | 06 October 2023, 10:50:01 UTC | [PL] Removed unneeded include and type aliases | 09 October 2023, 08:17:38 UTC |
| 244965b | Christoph Lehmann | 06 October 2023, 10:43:25 UTC | [PL] Removed unneeded include | 09 October 2023, 08:17:38 UTC |
| a5abc6e | Christoph Lehmann | 06 October 2023, 10:31:41 UTC | Added includes of global linear solver type header | 09 October 2023, 08:17:38 UTC |
| 2ca8d0f | Thomas Fischer | 04 September 2023, 08:38:15 UTC | [MathLib] Output norm type of PETSc solver | 09 October 2023, 06:35:57 UTC |
| 5d4748d | Thomas Fischer | 06 October 2023, 19:13:59 UTC | [MeL/IO/XDMF] Add missing uchar data type | 06 October 2023, 19:13:59 UTC |
| 0ae8563 | Christoph Lehmann | 06 October 2023, 10:14:26 UTC | [MaL] Moved linear solver type alias to separate file | 06 October 2023, 10:14:26 UTC |
| b8e243a | Dmitry Yu. Naumov | 06 October 2023, 09:04:14 UTC | Merge branch 'THM_FixPrevIceVolumeFraction' into 'master' [PL/THM] Explicitly set phi_fr_prev See merge request ogs/ogs!4744 | 06 October 2023, 09:04:14 UTC |
| 69ca768 | Dmitri Naumov | 04 October 2023, 08:29:10 UTC | [T/THM] Heat transport in stationary flow w/ ice Presence of ice phase at slightly positive temperatures with shallow sigmoid function for ice phase should not affect the results much but only for amount of ice formed. In the simulation the initial ice volume fraction is 0.0379... . Displacement and stress are read from previous simulation's steady-state result. Incorrect update of phi_fr_prev causes pressure to drop significantly in the first step, which is unexpected, since everything is in equilibrium. Temperature load starts only after 10 steps at t=10000s. | 05 October 2023, 13:14:07 UTC |
| 277410a | Dmitri Naumov | 26 September 2023, 09:59:20 UTC | [PL/THM] Explicitly set phi_fr_prev, don't update The phi_fr_prev variable initialization was not correct. Setting it explicitly avoids any non-initialized states. | 04 October 2023, 16:43:36 UTC |
| d846de4 | Tom Fischer | 03 October 2023, 17:15:58 UTC | Merge branch 'FixConstructMeshesFromGeometryBulkElementIds' into 'master' Use bulk element's id for boundary element construction Closes #3430 See merge request ogs/ogs!4751 | 03 October 2023, 17:15:58 UTC |
| 93f12dc | Dmitry Yu. Naumov | 03 October 2023, 16:32:57 UTC | Merge branch 'FixPETScMeshComponenteMapBug' into 'master' Bug fix for DOF index calculation in parallel ogs version See merge request ogs/ogs!4738 | 03 October 2023, 16:32:57 UTC |
| b5dcba5 | Dmitri Naumov | 03 October 2023, 13:51:27 UTC | [T/TRM] Add boundary mesh output to vtkdiff checks | 03 October 2023, 13:51:27 UTC |
| 21ce236 | Thomas Fischer | 19 September 2023, 12:18:23 UTC | [PL/Assembly] Negative row indices are handled later on | 03 October 2023, 12:11:37 UTC |
| 875817d | Thomas Fischer | 19 September 2023, 10:37:56 UTC | [NL/DOF] Forward returned nop value instead of modifying | 03 October 2023, 12:11:37 UTC |
| 9529d34 | Thomas Fischer | 22 September 2023, 12:35:24 UTC | [T/TRM] Add second output config | 03 October 2023, 12:11:37 UTC |
| e58aa28 | Thomas Fischer | 22 September 2023, 12:33:41 UTC | [T/TRM/LinearMechanics] Use meshes instead of geometry | 03 October 2023, 12:11:37 UTC |
| a23c038 | Dmitri Naumov | 28 September 2023, 14:39:47 UTC | [MGTL] Fix name of a public class member | 02 October 2023, 22:02:36 UTC |
| 62300af | Dmitri Naumov | 28 September 2023, 14:40:41 UTC | [MGTL] Remove unused getMesh from the interface | 02 October 2023, 22:02:36 UTC |
| 242f013 | Dmitri Naumov | 28 September 2023, 14:39:47 UTC | [MGTL] Fix name of a public class member | 02 October 2023, 22:02:36 UTC |
| b6a3c74 | Dmitri Naumov | 28 September 2023, 12:52:08 UTC | [MGTL] Extract common serial/petsc case code | 02 October 2023, 22:02:36 UTC |
| 9ca37af | Dmitri Naumov | 28 September 2023, 14:18:16 UTC | [MGTL] Pass element's id to created boundary elems This ensures correct bulk_node_ids map | 02 October 2023, 22:02:36 UTC |
| d37b6ae | Dmitri Naumov | 29 September 2023, 11:22:26 UTC | [T/MGTL] Construct meshes from geometry square | 02 October 2023, 22:02:36 UTC |
| ccbca34 | Lars Bilke | 29 September 2023, 12:24:40 UTC | [cmake] Fixed index bug in AddTest when using vtkdiff-mesh. | 02 October 2023, 22:02:36 UTC |
| a6c00c5 | Dmitry Yu. Naumov | 02 October 2023, 15:59:38 UTC | Merge branch 'timeloop-refactorings' into 'master' Small refactorings of the timeloop See merge request ogs/ogs!4748 | 02 October 2023, 15:59:38 UTC |
| b132260 | Christoph Lehmann | 28 September 2023, 12:47:37 UTC | [PL] Removed unused method | 02 October 2023, 14:41:31 UTC |
| 4ef9479 | Christoph Lehmann | 28 September 2023, 12:45:52 UTC | [PL] Extracted preOutputInitialConditions() method | 02 October 2023, 14:41:31 UTC |
| f6a32cd | Christoph Lehmann | 28 September 2023, 12:25:50 UTC | [PL] Changed lambda to separate method | 02 October 2023, 14:18:41 UTC |
| 4037b59 | Christoph Lehmann | 28 September 2023, 12:10:57 UTC | [PL] Added documentation | 02 October 2023, 14:18:41 UTC |
| 5f2b6db | Christoph Lehmann | 28 September 2023, 11:41:35 UTC | [PL] Renamed method doNonlinearIteration() ... to preTsNonlinearSolvePostTs() | 02 October 2023, 14:18:41 UTC |
| e948d10 | Dmitri Naumov | 02 October 2023, 09:11:24 UTC | Remove spdlog dependency for Geo and MathLibs The spdlog is public in BaseLib and repeating it in on BaseLib dependent libraries is not necessary and violates the ODR. | 02 October 2023, 11:00:27 UTC |
| 3abcab8 | Dmitry Yu. Naumov | 29 September 2023, 14:43:23 UTC | Merge branch 'UseMaterialSpatialDistributionMapAsValue' into 'master' Use MaterialSpatialDistributionMap as value See merge request ogs/ogs!4745 | 29 September 2023, 14:43:23 UTC |
| 1585744 | Lars Bilke | 29 September 2023, 13:25:51 UTC | Merge branch 'bundled-fmt' into 'master' Use bundled fmt from spdlog See merge request ogs/ogs!4750 | 29 September 2023, 13:25:51 UTC |
| 3e5b2ee | Dmitri Naumov | 27 September 2023, 15:25:34 UTC | [PL] Use MaterialSpatialDistr.Map as value The structure is small and does not require to be stored on heap. | 29 September 2023, 12:42:33 UTC |
