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https://github.com/ENCODE-DCC/encoded
01 September 2024, 02:49:24 UTC
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Revision Author Date Message Commit Date
7bab075 Casey Litton 01 July 2019, 22:59:26 UTC Update to version 87.0 (#2823) 01 July 2019, 22:59:26 UTC
7931196 Casey Litton 01 July 2019, 22:29:15 UTC ENCD-4723-update-snovault-1.0.33 (#2840) 01 July 2019, 22:29:15 UTC
308aed8 Casey Litton 28 June 2019, 20:29:15 UTC Merge pull request #2830 [EPIC] ENCD-4716 Update cloud init deployment [EPIC] ENCD-4716 Update cloud init deployment 28 June 2019, 20:29:15 UTC
43f3824 Casey Litton 26 June 2019, 18:53:27 UTC ENCD-4713-manually-install-oracle-java-11 28 June 2019, 19:47:27 UTC
fc53b05 Casey Litton 26 June 2019, 23:26:53 UTC ENCD-4719 Use 16 processes demo batchupgrade 28 June 2019, 19:47:27 UTC
f150354 Casey Litton 05 June 2019, 16:09:25 UTC ENCD-4665-organize-cluster-cloud-yamls 28 June 2019, 19:47:27 UTC
3aa9756 caseylitton 13 June 2019, 21:33:02 UTC ENCD-4688-remove-unused-code-from-deploy 28 June 2019, 19:38:28 UTC
752f8a9 Forrest Tanaka 27 June 2019, 19:41:21 UTC ENCD-4704 Fix frozen column for Safari (#2825) 27 June 2019, 19:41:21 UTC
620ca9c Yunhai Luo 27 June 2019, 19:40:51 UTC ENCD-4708 Fix the target column on experiment series page (#2828) 27 June 2019, 19:40:51 UTC
e61a432 Paul Sud 26 June 2019, 18:40:10 UTC SNO-102-use-openjdk-java-for-circleci (#2832) 26 June 2019, 18:40:10 UTC
75e0d9b Paul Sud 26 June 2019, 18:38:36 UTC ENCD-4703-test-submitter-user-circleci-fix (#2824) 26 June 2019, 18:38:36 UTC
ab8669e Paul Sud 21 June 2019, 00:32:09 UTC ENCD-4654 change ChIP-seq to TF ChIP-seq (#2806) * ENCD-4654 change ChIP-seq to TF ChIP-seq * default to control chipseq when missing target 21 June 2019, 00:32:09 UTC
c19d932 Casey Litton 21 June 2019, 00:18:58 UTC ENCD-4698-update-snovault-1.0.32 (#2822) 21 June 2019, 00:18:58 UTC
e051be4 Yunhai Luo 20 June 2019, 23:57:56 UTC ENCD-4662 Experiment series (#2812) 20 June 2019, 23:57:56 UTC
6444325 Phil 20 June 2019, 20:20:25 UTC ENCD-4659-batch-download-unit-test (#2815) 20 June 2019, 20:20:25 UTC
c5684c9 zmyers23 20 June 2019, 20:18:22 UTC ENCD-4514 add MouseDevSeries internal tag (#2821) 20 June 2019, 20:18:22 UTC
1b45de4 zmyers23 20 June 2019, 18:47:44 UTC ENCD-4106 Remove kyoto from aliases and dbxrefs (#2803) 20 June 2019, 18:47:44 UTC
3cc877f Forrest Tanaka 20 June 2019, 15:55:50 UTC ENCD-4672 Remove news page and instead link to generic search (#2811) 20 June 2019, 15:55:50 UTC
4d26814 emro 20 June 2019, 15:52:36 UTC ENCD-4653 add AWS link (#2798) 20 June 2019, 15:52:36 UTC
1e26b51 jenjou 19 June 2019, 17:04:28 UTC ENCD-4415 Add GM perturbation property (#2816) 19 June 2019, 17:04:28 UTC
1f44421 Idan Gabdank 19 June 2019, 16:44:53 UTC ENCD-4694 restrict use of FCC in experiments (#2817) 19 June 2019, 16:44:53 UTC
57eb4ba Meenakshi Kagda 19 June 2019, 16:42:50 UTC ENCD-4471-add-prod-id-source-treatment (#2808) 19 June 2019, 16:42:50 UTC
bcf550d Paul Sud 18 June 2019, 22:23:11 UTC ENCD-4671 port tests circleci (#2810) 18 June 2019, 22:23:11 UTC
c73a2aa zmyers23 18 June 2019, 19:42:17 UTC ENCD-4062 Fix read name details dependency (#2797) 18 June 2019, 19:42:17 UTC
909c5b4 jenjou 17 June 2019, 20:49:28 UTC ENCD-4613 Changed cRE to cCRE with batch upgrades and tests (#2763) 17 June 2019, 20:49:28 UTC
3fd7ac7 Forrest Tanaka 17 June 2019, 20:03:14 UTC ENCD-4656 Fix BDD Travis CI test failures (#2793) 17 June 2019, 20:03:14 UTC
0f6b300 Paul Sud 17 June 2019, 19:59:23 UTC ENCD-4651 add new analysis step type (#2785) 17 June 2019, 19:59:22 UTC
e078bc4 Forrest Tanaka 17 June 2019, 19:55:44 UTC ENCD-4586 Freeze left column of matrix (#2799) 17 June 2019, 19:55:44 UTC
74d47b4 Casey Litton 14 June 2019, 19:51:11 UTC Merge pull request #2805 from SNO-100-92-101 Refactor log and parallelize batchupgrade 14 June 2019, 19:51:11 UTC
9a2141f Casey Litton 12 June 2019, 23:02:19 UTC SNO-100 Parallelize batchupgrade script 14 June 2019, 19:07:24 UTC
f3703ee Casey Litton 16 May 2019, 17:22:55 UTC SNO-92-fix-batch-upgrade-logging 14 June 2019, 19:07:24 UTC
f29d95b Casey Litton 10 June 2019, 23:45:34 UTC SNO-101 Refactor batchupgrade 14 June 2019, 19:07:24 UTC
1b587f4 Casey Litton 07 June 2019, 18:33:31 UTC Update to 86.0 (#2801) 07 June 2019, 18:33:31 UTC
d1fcf7b Casey Litton 06 June 2019, 14:51:07 UTC ENCD-4676-add-nagios-role-deployment (#2796) 06 June 2019, 14:51:07 UTC
2ed1dee Casey Litton 06 June 2019, 08:04:28 UTC ENCD-4522-revert (#2800) 06 June 2019, 08:04:28 UTC
518e712 Casey Litton 30 May 2019, 22:18:32 UTC ENCD-4666-update-snovault-1.0.31 (#2790) 30 May 2019, 22:18:32 UTC
35ef239 keenangraham 30 May 2019, 21:51:56 UTC ENCD-4657-add-s3-uri-to-metadata (#2786) 30 May 2019, 21:51:56 UTC
0e89464 Casey Litton 30 May 2019, 19:35:23 UTC ENCD-4639 Organize demo cloud yaml (#2773) 30 May 2019, 19:35:23 UTC
d1aff39 zmyers23 30 May 2019, 18:47:54 UTC ENCD-4634 Add database to file_format (#2770) 30 May 2019, 18:47:54 UTC
eb9c85b Forrest Tanaka 30 May 2019, 18:20:36 UTC ENCD-4541 Add multiple facets to cart view pages (#2780) 30 May 2019, 18:20:36 UTC
f9230d3 Forrest Tanaka 30 May 2019, 17:55:46 UTC ENCD-4633 Update saucelabs connect version 4.5.3 (#2788) 30 May 2019, 17:55:46 UTC
82f36f9 Paul Sud 30 May 2019, 17:52:18 UTC ENCD-4609 Exclude fccs institutional certification (#2764) 30 May 2019, 17:52:18 UTC
7265a53 Paul Sud 30 May 2019, 17:51:04 UTC ENCD-4631 add new qc object for gencode categories (#2787) 30 May 2019, 17:51:04 UTC
5a2d36c Meenakshi Kagda 30 May 2019, 17:48:57 UTC ENCD-4492-audit-to-chk-fq-non-fq-pair (#2776) 30 May 2019, 17:48:57 UTC
cd17693 emro 30 May 2019, 17:47:09 UTC ENCD-4084 date selector facet (#2759) 30 May 2019, 17:47:09 UTC
ba11fb8 jenjou 30 May 2019, 00:23:48 UTC ENCD-4600 Add MIME type for ab1 attachment (#2774) 30 May 2019, 00:23:48 UTC
5e7ed70 Phil 29 May 2019, 22:33:21 UTC SNO-93-user-count-does-not-match (#2758) 29 May 2019, 22:33:20 UTC
d375275 Forrest Tanaka 29 May 2019, 22:13:26 UTC ENCD-4647 Display QC metric properties with multitype (#2783) 29 May 2019, 22:13:26 UTC
7ebfed6 Phil 29 May 2019, 22:01:57 UTC SNO-90-added-advanced-search (#2729) 29 May 2019, 22:01:57 UTC
e69ea99 keenangraham 29 May 2019, 20:42:13 UTC ENCD-4648-always-show-cloud-metadata (#2777) 29 May 2019, 20:42:13 UTC
ac5af28 Forrest Tanaka 29 May 2019, 20:39:11 UTC ENCD-4642 Stop home banner truncation (#2781) 29 May 2019, 20:39:11 UTC
0a64100 Paul Sud 29 May 2019, 20:26:45 UTC ENCD-4599 fix audit detail typo (#2765) 29 May 2019, 20:26:45 UTC
90787ef Phil 29 May 2019, 20:09:45 UTC ENCD-4522-fixed-issue-with-news-date (#2749) 29 May 2019, 20:09:44 UTC
f009794 Phil 29 May 2019, 20:07:48 UTC ENCD-4400-added-creative-commons-logo (#2750) 29 May 2019, 20:07:48 UTC
5ba9734 jahilton 29 May 2019, 20:02:33 UTC ENCD-4611 update 2 polyA assay_titles (#2761) 29 May 2019, 20:02:33 UTC
5c2b446 keenangraham 23 May 2019, 00:16:23 UTC Update to 85.2 (#2779) 23 May 2019, 00:16:23 UTC
de3914c Ben Hitz 23 May 2019, 00:15:50 UTC ENCD-4620-indexing-failures (#2775) * reverse test order so that it makes some amount of counting sense * use this elasticsearch.yml file 23 May 2019, 00:15:50 UTC
e4cd58d keenangraham 22 May 2019, 22:30:27 UTC ENCD-4650-update-snovault-1.0.30 (#2778) 22 May 2019, 22:30:27 UTC
b11510b Casey Litton 17 May 2019, 17:19:10 UTC Update to 85.1 (#2772) 17 May 2019, 17:19:10 UTC
60a7dfb Forrest Tanaka 17 May 2019, 17:13:10 UTC ENCD-4628 Add a mechanism for a home page banner (#2768) 17 May 2019, 17:13:10 UTC
e076bff Casey Litton 15 May 2019, 20:16:16 UTC Update to version v85.0 (#2766) 15 May 2019, 20:16:16 UTC
31f6a16 Yunhai Luo 13 May 2019, 20:49:02 UTC ENCD-4625 Fix target upgrade for chromatin remodeler (#2755) 13 May 2019, 20:49:02 UTC
08f1cbf Casey Litton 09 May 2019, 21:45:31 UTC ENCD-4624-update-snovault-1.0.29 (#2754) 09 May 2019, 21:45:31 UTC
a27f24d Casey Litton 09 May 2019, 19:31:10 UTC ENCD-4392-update-to-java-11 (#2726) 09 May 2019, 19:31:10 UTC
8d2952f Phil 09 May 2019, 19:24:40 UTC SNO-91-update-java-ref (#2753) 09 May 2019, 19:24:40 UTC
43b842d Phil 09 May 2019, 19:09:15 UTC SNO-87-fix-profile-trailing-slash (#2710) 09 May 2019, 19:09:15 UTC
3554402 jahilton 09 May 2019, 19:01:28 UTC ENCD-4619 Add experiment classification to data insert (#2752) 09 May 2019, 19:01:28 UTC
2b450cd keenangraham 09 May 2019, 18:59:14 UTC ENCD-4361-validate-schema-set-status (#2748) 09 May 2019, 18:59:14 UTC
2d3a6b2 Casey Litton 08 May 2019, 20:47:21 UTC Merge pull request #2727 from ENCODE-DCC/encd-4579-4563-4558-ontology-update-v85 08 May 2019, 20:47:21 UTC
b20bb3d jason Hilton 22 April 2019, 21:53:36 UTC ENCD-4558 add 2 new FCC assays 08 May 2019, 20:43:02 UTC
0425d7f jason Hilton 22 April 2019, 21:56:10 UTC ENCD-4563 shorten 3 assay titles 08 May 2019, 20:35:00 UTC
564b17f jason Hilton 23 April 2019, 13:48:13 UTC ENCD-4579 update to EFO3 and update ontology.json and docs 08 May 2019, 20:35:00 UTC
e939f67 Paul Sud 08 May 2019, 20:31:46 UTC ENCD-4536 long read RNA audit (#2735) 08 May 2019, 20:31:46 UTC
27976fa Paul Sud 08 May 2019, 19:42:44 UTC ENCD-4535 long rna qc (#2673) 08 May 2019, 19:42:44 UTC
fac7ef6 Phil 08 May 2019, 19:24:00 UTC SNO-86-escape-search-text (#2709) 08 May 2019, 19:24:00 UTC
5feac06 keenangraham 08 May 2019, 19:17:26 UTC ENCD-3642-fix-file-format-download (#2746) 08 May 2019, 19:17:26 UTC
5d2d29b jenjou 08 May 2019, 19:06:50 UTC ENCD-4602 Update link on home page button (#2744) 08 May 2019, 19:06:50 UTC
74c474e zmyers23 08 May 2019, 19:05:59 UTC ENCD-4606 Add error correction step type (#2747) 08 May 2019, 19:05:59 UTC
114884c jenjou 08 May 2019, 19:05:01 UTC ENCD-4493 Limit RIN audit to certain assays (#2743) 08 May 2019, 19:05:01 UTC
116902e Yunhai Luo 08 May 2019, 19:01:42 UTC ENCD-4593 add histone and control chip-seq titles (#2741) 08 May 2019, 19:01:42 UTC
5868acd Paul Sud 08 May 2019, 18:58:21 UTC ENCD-4504 miRNA audits (#2736) 08 May 2019, 18:58:21 UTC
df745f2 Idan Gabdank 08 May 2019, 18:03:19 UTC ENCD-4503 micro RNA qc (#2679) 08 May 2019, 18:03:19 UTC
94ee8a0 zmyers23 08 May 2019, 17:39:12 UTC ENCD-4570 Add M21 V29 V30 genome annotations (#2745) 08 May 2019, 17:39:12 UTC
dca3817 Meenakshi Kagda 07 May 2019, 17:07:00 UTC ENCD-4544 deleted the file atacseq qm json file (#2738) 07 May 2019, 17:07:00 UTC
102b5ce Yunhai Luo 07 May 2019, 17:03:36 UTC ENCD-3108 Add new target categories (#2742) 07 May 2019, 17:03:36 UTC
c0c5c2a Phil 07 May 2019, 16:58:26 UTC SNO-88-fix-user-search-count (#2722) 07 May 2019, 16:58:26 UTC
3f90b3f Yunhai Luo 03 May 2019, 23:25:51 UTC ENCD-4589 Add an experimental audit for biosample characterization. (#2739) 03 May 2019, 23:25:51 UTC
5cc64cf Forrest Tanaka 03 May 2019, 23:24:42 UTC ENCD-4316 Make generic matrix-rendering component. (#2728) 03 May 2019, 23:24:42 UTC
763a406 khzlin 01 May 2019, 19:20:00 UTC ENCD-4575-software-column-used-by (#2737) 01 May 2019, 19:20:00 UTC
607a726 Forrest Tanaka 01 May 2019, 19:17:40 UTC ENCD-4545 Update visualization browser list (#2730) 01 May 2019, 19:17:40 UTC
c15df88 Phil 01 May 2019, 19:09:46 UTC ENCD-4597-show-all-datasets (#2733) 01 May 2019, 19:09:46 UTC
9ccb0a5 Casey Litton 24 April 2019, 20:16:53 UTC Update version 84.0 (#2731) 24 April 2019, 20:16:53 UTC
c677ce0 khzlin 22 April 2019, 21:40:11 UTC ENCD-4591-add-title-column-back (#2723) 22 April 2019, 21:40:11 UTC
046970d Phil 22 April 2019, 21:33:59 UTC ENCD-4590-fix-facet-num-line (#2725) 22 April 2019, 21:33:59 UTC
16249d0 Phil 22 April 2019, 20:52:13 UTC ENCD-4592 Update to Java 9 in travis (#2724) 22 April 2019, 20:52:13 UTC
74a7dfc Casey Litton 18 April 2019, 19:12:58 UTC ENCD-4585 Update to snovault 1.0.28 (#2721) 18 April 2019, 19:12:58 UTC
cf07d9a Casey Litton 18 April 2019, 18:39:25 UTC SNO-89 Fix backoff error key in indexer (#2720) 18 April 2019, 18:39:25 UTC
05933d0 Phil 18 April 2019, 18:32:18 UTC ENCD-4559-x-limit-zero-results (#2711) 18 April 2019, 18:32:18 UTC
a1e955c Paul Sud 17 April 2019, 21:58:48 UTC ENCD-4349 restrict gm reagents (#2672) 17 April 2019, 21:58:47 UTC
63fbf4b Casey Litton 17 April 2019, 21:54:46 UTC ENCD-4578 Fix s3 to s3 allow flag in deployment (#2708) 17 April 2019, 21:54:46 UTC
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