| 174c75e | Enrique Noriega | 22 April 2017, 06:59:55 UTC | Randomized the order of epochs. Introduced a Decay stream API and implemented Q-Learning | 22 April 2017, 06:59:55 UTC |
| def08cd | Enrique Noriega | 21 April 2017, 21:06:06 UTC | Added the furthest participant selection strategy. Added the Is UAZ features to the state | 21 April 2017, 21:06:06 UTC |
| 35657d3 | Enrique Noriega | 20 April 2017, 06:22:12 UTC | Added the furthest participant selection strategy. Added the Is UAZ features to the state | 20 April 2017, 06:22:12 UTC |
| abf0096 | Enrique Noriega | 19 April 2017, 19:44:19 UTC | Bug fix for the exploit endpoints choosing strategy | 19 April 2017, 19:44:19 UTC |
| 6072df4 | Enrique Noriega | 19 April 2017, 19:31:27 UTC | Some refactoring and some code for analysis | 19 April 2017, 19:31:27 UTC |
| 52e98f5 | Enrique Noriega | 19 April 2017, 07:18:42 UTC | Plot all functions' coefficients and keep track of the actions chosen for analysis | 19 April 2017, 07:18:42 UTC |
| d4d361a | Enrique Noriega | 19 April 2017, 05:03:59 UTC | Replaces some hacky boolean flags with an enumeration | 19 April 2017, 05:03:59 UTC |
| 0547d1f | Enrique Noriega | 19 April 2017, 05:03:24 UTC | Replaced some hacky boolean flags with an enumeration | 19 April 2017, 05:03:24 UTC |
| 4b32964 | Enrique Noriega | 19 April 2017, 04:34:53 UTC | Removed duplicate code in the environment and in the agent. Now both contexts use as much as the same code as possible to reduce potential bugs surface. Fully implemented independent endpoint choosing and query choosing as separate actions. Reduced the tolerance threshold for convergence Incremented epsilon for Epsilon-Greedy | 19 April 2017, 04:34:53 UTC |
| 0162a75 | Enrique Noriega | 18 April 2017, 23:31:40 UTC | Implemented: The endpoint actions, decaying epsilon for epsilon-greedy policy and single, determninistically seeded RNG | 18 April 2017, 23:31:40 UTC |
| d4bde99 | Enrique Noriega | 18 April 2017, 07:20:03 UTC | Started the generalization of actions | 18 April 2017, 07:20:03 UTC |
| bbed057 | Enrique Noriega | 18 April 2017, 00:51:25 UTC | Refactores the Actions enumeration into it's own package and changed the names to reflect the actual names of the actions | 18 April 2017, 00:51:25 UTC |
| 7d4822e | Enrique Noriega | 17 April 2017, 20:02:59 UTC | Code with which the EMNLP paper was written | 17 April 2017, 20:02:59 UTC |
| 5ce6680 | Enrique Noriega | 10 April 2017, 22:43:22 UTC | First implementation of the policy to select actions | 10 April 2017, 22:43:22 UTC |
| 2ba7cfe | Enrique Noriega | 03 April 2017, 21:49:28 UTC | Code to deserialize a policy from a json file | 03 April 2017, 21:49:28 UTC |
| b81427e | Enrique Noriega | 02 April 2017, 02:01:56 UTC | Small changes to keep track of the running time and papers retrieved by the baseline search | 02 April 2017, 02:01:56 UTC |
| 8ffdea9 | Enrique Noriega | 01 April 2017, 07:05:57 UTC | Refactor to allow for the generalization of an RL problem. Also implemented a toy problem to test if the code is learning. | 01 April 2017, 07:05:57 UTC |
| 1417f89 | Enrique Noriega | 31 March 2017, 01:44:38 UTC | Refactor for a much cleaner logic flow | 31 March 2017, 01:44:38 UTC |
| a995c78 | Enrique Noriega | 27 March 2017, 07:06:06 UTC | Initial implementation of RL using online 1-step tabular SARSA | 27 March 2017, 07:06:06 UTC |
| e210a60 | Enrique Noriega | 21 March 2017, 17:41:47 UTC | Typo fix | 21 March 2017, 17:41:47 UTC |
| 14a4465 | Enrique Noriega | 21 March 2017, 17:38:18 UTC | Typo fix | 21 March 2017, 17:38:18 UTC |
| 7e5628f | Enrique Noriega | 17 March 2017, 21:29:21 UTC | Refactored the name space from dyce to focused reading. Added tracing code to analyze all the steps taken by the reader offline | 17 March 2017, 21:29:21 UTC |
| 1ae0369 | Enrique Noriega | 17 March 2017, 02:42:07 UTC | Progress | 17 March 2017, 02:42:07 UTC |
| 08a4327 | Enrique Noriega | 13 March 2017, 03:15:03 UTC | Progress | 13 March 2017, 03:15:03 UTC |
| 7038564 | Enrique Noriega | 10 March 2017, 18:38:02 UTC | TinkerPop partial implementation | 10 March 2017, 18:38:02 UTC |
| ded56a6 | Enrique Noriega | 09 March 2017, 20:42:48 UTC | Progress | 09 March 2017, 20:42:48 UTC |
| 8334aa6 | Enrique Noriega | 09 March 2017, 20:41:10 UTC | Progress | 09 March 2017, 20:41:10 UTC |
| d97894e | Enrique Noriega | 09 March 2017, 19:01:17 UTC | Wrapped the graph library to allow for other implementations (tinkerpop and g4s) | 09 March 2017, 19:01:17 UTC |
| d66e9c6 | Enrique Noriega | 09 March 2017, 03:05:21 UTC | Progress | 09 March 2017, 03:05:21 UTC |
| 391a713 | Enrique Noriega | 01 March 2017, 18:40:41 UTC | Cosmetic changes | 01 March 2017, 18:40:41 UTC |
| ed88e77 | Enrique Noriega | 27 February 2017, 16:40:22 UTC | Progress | 27 February 2017, 16:40:22 UTC |
| d2005ba | Enrique Noriega | 27 February 2017, 06:54:35 UTC | Progress | 27 February 2017, 06:54:35 UTC |
| 500bb8d | Enrique Noriega | 26 February 2017, 23:00:49 UTC | Temporarely disabled evidence fetching for efficiency | 26 February 2017, 23:00:49 UTC |
| fb92ab4 | Enrique Noriega | 26 February 2017, 21:52:47 UTC | SQLite strategies update | 26 February 2017, 21:52:47 UTC |
| 110d9e0 | Enrique Noriega | 22 February 2017, 15:03:05 UTC | Bug fix | 22 February 2017, 15:03:05 UTC |
| d5b8c7a | Enrique Noriega | 22 February 2017, 15:00:48 UTC | bug fixes | 22 February 2017, 15:00:48 UTC |
| fb00bdc | Enrique Noriega | 22 February 2017, 14:50:18 UTC | Bug fix | 22 February 2017, 14:50:18 UTC |
| 4671758 | Enrique Noriega | 22 February 2017, 14:45:45 UTC | bug fix | 22 February 2017, 14:45:45 UTC |
| b1ed10d | Enrique Noriega | 22 February 2017, 14:44:08 UTC | Made the code more resilient to failures | 22 February 2017, 14:44:08 UTC |
| c78cb80 | Enrique Noriega | 22 February 2017, 07:46:50 UTC | bug fix | 22 February 2017, 07:46:50 UTC |
| cce435e | Enrique Noriega | 22 February 2017, 07:38:34 UTC | Small optimization | 22 February 2017, 07:38:34 UTC |
| aece96d | Enrique Noriega | 22 February 2017, 07:29:38 UTC | Bug fix | 22 February 2017, 07:29:38 UTC |
| 084905f | Enrique Noriega | 22 February 2017, 07:19:58 UTC | Progress | 22 February 2017, 07:19:58 UTC |
| a1322ad | Enrique Noriega | 22 February 2017, 03:38:51 UTC | Bug fixes | 22 February 2017, 03:38:51 UTC |
| cf41834 | Enrique Noriega | 22 February 2017, 03:29:39 UTC | Bug fix | 22 February 2017, 03:29:39 UTC |
| 8496817 | Enrique Noriega | 22 February 2017, 03:01:45 UTC | Bug fix | 22 February 2017, 03:01:45 UTC |
| 099ce31 | Enrique Noriega | 22 February 2017, 02:59:13 UTC | Small test | 22 February 2017, 02:59:13 UTC |
| 48cb837 | Enrique Noriega | 22 February 2017, 02:47:16 UTC | Test script | 22 February 2017, 02:47:16 UTC |
| 3893c17 | Enrique Noriega | 22 February 2017, 02:44:55 UTC | Incorporated the Lucene query SQLIte code into scala | 22 February 2017, 02:44:55 UTC |
| 2623e6b | Enrique Noriega | 22 February 2017, 01:13:21 UTC | Changed the while loop to a do .. while loop | 22 February 2017, 01:13:21 UTC |
| 4835b72 | Enrique Noriega | 22 February 2017, 01:08:53 UTC | Small bug fix | 22 February 2017, 01:08:53 UTC |
| 9b786a5 | Enrique Noriega | 22 February 2017, 00:38:22 UTC | Removed a wrong reference to FillBlanks | 22 February 2017, 00:38:22 UTC |
| aae999a | Enrique Noriega | 22 February 2017, 00:24:13 UTC | Removed a duplicate KB from the agent | 22 February 2017, 00:24:13 UTC |
| 5d3cb76 | Enrique Noriega | 21 February 2017, 23:40:50 UTC | Test runner app for the mixings | 21 February 2017, 23:40:50 UTC |
| 3d0a7ab | Enrique Noriega | 20 February 2017, 16:53:51 UTC | Finished implementing the most connected endpoints strategy | 20 February 2017, 16:53:51 UTC |
| 850df0b | Enrique Noriega | 20 February 2017, 15:52:10 UTC | Some code refactoring to achieve a mixing style to build search agents | 20 February 2017, 15:52:10 UTC |
| ae030ba | Enrique Noriega | 19 February 2017, 03:56:37 UTC | Progress in refactoring the agent for modularity | 19 February 2017, 03:56:37 UTC |
| 724464e | Enrique Noriega | 18 February 2017, 20:49:00 UTC | New code implementation for the Search Agent | 18 February 2017, 20:49:00 UTC |
| ccd4873 | Enrique Noriega | 14 February 2017, 22:01:46 UTC | Merge branch 'master' into DeepRL # Conflicts: # main/src/main/resources/application.conf # main/src/main/scala/org/clulab/reach/mentions/serialization/json/JSONSer ializer.scala # src/main/scala/org/clulab/reach/ReachCLI.scala | 14 February 2017, 22:01:46 UTC |
| c2f559e | Tom Hicks | 14 February 2017, 21:13:54 UTC | Merge pull request #485 from clulab/menj Retrying pull request | 14 February 2017, 21:13:54 UTC |
| 34c99cb | Tom Hicks | 14 February 2017, 20:44:04 UTC | Update Travis to use scala 2.11.8. | 14 February 2017, 20:44:04 UTC |
| 6f21299 | Tom Hicks | 13 February 2017, 18:32:55 UTC | Update very outdated CHANGES file. | 13 February 2017, 18:32:55 UTC |
| 5ca5403 | Tom Hicks | 13 February 2017, 18:32:05 UTC | Rename output to serial-json format. | 13 February 2017, 18:32:05 UTC |
| 12a3665 | Tom Hicks | 10 February 2017, 04:56:02 UTC | Add outputter for Mentions-JSON format and allow its use in ReachCLI and specification in application.conf. | 10 February 2017, 04:56:02 UTC |
| 2cb81bf | Mihai Surdeanu | 07 February 2017, 21:54:20 UTC | Merge pull request #481 from clulab/iss477 Fix: previous file handling changes did not create empty restart file. | 07 February 2017, 21:54:20 UTC |
| 83747f4 | Tom Hicks | 07 February 2017, 21:24:05 UTC | Fix: previous file handling changes did not create empty restart file. | 07 February 2017, 21:24:05 UTC |
| 38d2c43 | Mihai Surdeanu | 28 January 2017, 01:11:08 UTC | Merge pull request #479 from clulab/slow find shortest path between heads only | 28 January 2017, 01:11:08 UTC |
| 76d3216 | Mihai Surdeanu | 28 January 2017, 00:42:56 UTC | Fixed trigger in the Negative_${ ruleType }_in_response_to rule, which was affecting countSemanticNegatives. | 28 January 2017, 00:42:56 UTC |
| c6978b9 | Marco Antonio Valenzuela Escárcega | 26 January 2017, 23:43:21 UTC | find shortest path between heads only | 26 January 2017, 23:43:21 UTC |
| 1083706 | Tom Hicks | 24 January 2017, 19:53:16 UTC | Merge pull request #473 from clulab/phase3usecase Phase3usecase | 24 January 2017, 19:53:16 UTC |
| 9f631f1 | Enrique Noriega | 21 January 2017, 00:35:36 UTC | Changed the destination of the search to run a new baseline | 21 January 2017, 00:35:36 UTC |
| 67469fd | Enrique Noriega | 20 January 2017, 19:15:09 UTC | Merge from master to DRL | 20 January 2017, 19:15:09 UTC |
| 6692bea | Mihai Surdeanu | 14 January 2017, 23:54:54 UTC | Merge pull request #476 from clulab/multi-out Produce multiple output formats per input file | 14 January 2017, 23:54:54 UTC |
| 8d7f2fb | Gus Hahn-Powell | 14 January 2017, 21:49:34 UTC | bug fixes | 14 January 2017, 21:49:34 UTC |
| 956db06 | Gus Hahn-Powell | 14 January 2017, 21:05:39 UTC | Resolves #475 | 14 January 2017, 21:05:39 UTC |
| eca5be9 | Mihai Surdeanu | 12 January 2017, 22:56:14 UTC | Better queries for use case 3 | 12 January 2017, 22:56:14 UTC |
| b7f88bc | Mihai Surdeanu | 12 January 2017, 22:08:28 UTC | Reverted to default use case | 12 January 2017, 22:08:28 UTC |
| 1493c85 | Mihai Surdeanu | 12 January 2017, 22:04:51 UTC | Added use cases for Phase III eval. | 12 January 2017, 22:04:51 UTC |
| e51a3ab | Mihai Surdeanu | 11 January 2017, 15:32:23 UTC | Merge pull request #472 from clulab/restart Adds restart capability, enhanced logging to ReachCLI | 11 January 2017, 15:32:23 UTC |
| c2d16e7 | Tom Hicks | 11 January 2017, 06:50:54 UTC | Add more processing statistics to ReachCLI logging via new class. | 11 January 2017, 06:50:54 UTC |
| 97dda89 | Tom Hicks | 10 January 2017, 21:28:25 UTC | Update for past breaking logging changes: obsoleting of log file. | 10 January 2017, 21:28:25 UTC |
| b1219ae | Tom Hicks | 10 January 2017, 21:27:28 UTC | Remove obsoleted log file parameter from ReachCLI. | 10 January 2017, 21:27:28 UTC |
| ba981d3 | Tom Hicks | 10 January 2017, 04:50:21 UTC | Add processing restart capability, debugging of configuration to ReachCLI. Add/use root path in application.conf file. | 10 January 2017, 04:50:21 UTC |
| 5af7782 | Mihai Surdeanu | 07 January 2017, 08:12:08 UTC | Merge pull request #471 from clulab/issue459 Issue459: Complex formation is direct | 07 January 2017, 08:12:08 UTC |
| 25853f8 | Dane Bell | 06 January 2017, 22:50:44 UTC | Merge branch 'master' into issue459 | 06 January 2017, 22:50:44 UTC |
| 187a660 | Dane Bell | 06 January 2017, 22:50:11 UTC | Complex formation is always direct | 06 January 2017, 22:50:11 UTC |
| e42974c | Gus Hahn-Powell | 24 December 2016, 04:48:07 UTC | Merge pull request #470 from clulab/demeter Hide embedded implementation of KB resolution from users. | 24 December 2016, 04:48:07 UTC |
| 77edc79 | Tom Hicks | 24 December 2016, 02:55:43 UTC | Hide embedded implementation of KB resolution from users. | 24 December 2016, 02:55:43 UTC |
| 5cd4000 | Enrique Noriega | 23 December 2016, 00:42:55 UTC | Store the evidence and the counts separately for performance reasons | 23 December 2016, 00:42:55 UTC |
| 387feb8 | Enrique Noriega | 21 December 2016, 22:21:11 UTC | Added support for storing the evidence text as well as computing TFIDF | 21 December 2016, 22:21:11 UTC |
| 6d4f15b | Enrique Noriega | 21 December 2016, 21:34:29 UTC | Keep track of the document names | 21 December 2016, 21:34:29 UTC |
| 1b623a4 | Mihai Surdeanu | 21 December 2016, 01:16:56 UTC | Merge pull request #469 from clulab/issue454 Issue 454: Knockdown, silencing, etc. | 21 December 2016, 01:16:56 UTC |
| b6fa918 | Enrique Noriega | 21 December 2016, 00:18:51 UTC | Explicitly close the source objects | 21 December 2016, 00:18:51 UTC |
| 2c10015 | Dane Bell | 20 December 2016, 22:55:17 UTC | Cleanup debug printlns | 20 December 2016, 22:55:17 UTC |
| 4b60c11 | Dane Bell | 20 December 2016, 21:30:33 UTC | Add negative-polarity expressions for complex events | 20 December 2016, 21:30:33 UTC |
| 6747516 | Enrique Noriega | 20 December 2016, 20:53:11 UTC | Explicitly close the source objects | 20 December 2016, 20:53:11 UTC |
| 3ac929b | Enrique Noriega | 20 December 2016, 20:41:29 UTC | Bug fix | 20 December 2016, 20:41:29 UTC |
| 4f3680a | Enrique Noriega | 20 December 2016, 20:29:25 UTC | Counter to compute TF-IDF over activations on the pubmed IA | 20 December 2016, 20:29:25 UTC |
| 2cc731c | Dane Bell | 20 December 2016, 20:08:01 UTC | Merge branch 'master' into issue454 | 20 December 2016, 20:08:01 UTC |
| 2128324 | Enrique Noriega | 19 December 2016, 21:22:26 UTC | Merge branch 'master' into DeepRL # Conflicts: # src/main/scala/org/clulab/reach/ReachCLI.scala | 19 December 2016, 21:22:26 UTC |
