https://github.com/stan-dev/example-models

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Revision Author Date Message Commit Date
91d50a7 Removed old data 04 March 2016, 20:11:29 UTC
28bacae Added flight simulator data 04 March 2016, 20:11:01 UTC
4619467 Add data for model 47 03 March 2016, 21:55:40 UTC
b4b39fc Removed mu_a 03 March 2016, 17:25:54 UTC
57f9cbc Merge pull request #32 from ericnovik/arm-ch3-model-updates ARM ch3 model updates 09 November 2015, 05:50:09 UTC
d26252a Updated 3.7_Prediction.R, kidiq_prediction.stan, and kidiq_validation.stan 20 August 2015, 22:34:47 UTC
4cf5cf7 Updated 3.4_StaInference.R, 3.5_GraphDisplays.R and 3.6_Diagnostics.R 20 August 2015, 21:39:51 UTC
c8ce3f9 Updated 3.3_Interactions.R and kidiq_interaction.stan 20 August 2015, 20:57:29 UTC
4af45de Updated 3.2_MultiplePredictors.R and kidiq_multi_preds.stan. 20 August 2015, 20:06:26 UTC
cab40ce Fixed 3.1_OnePredictor.R and kidscore_momhs.stan and kidscore_momiq.stan 18 August 2015, 21:50:57 UTC
d14ef75 Merge pull request #29 from dmenne/dmenne-dev-bugs @dmenne fixed a lot of the bugs examples. 12 August 2015, 15:15:02 UTC
1c03891 Merge branch 'master' of https://github.com/stan-dev/example-models into dmenne-dev-bugs 11 August 2015, 06:58:03 UTC
eec3b45 Delete non-required simple.data.R; 07 August 2015, 13:31:19 UTC
8ce2b83 Added black/white theme 07 August 2015, 13:18:40 UTC
b081409 Plot Figure 6/7 in manual Merge branch 'dmenne-dev-bugs' of https://github.com/dmenne/example-models into dmenne-dev-bugs Conflicts: bugs_examples/vol1/surgical/surgical.R bugs_examples/vol1/surgical/surgical_stanified.stan 07 August 2015, 13:07:41 UTC
135abe9 Add R program with plot to creat Figure 6 and Figure 7 (ranking) in BUGS manual. Add stanified version 07 August 2015, 12:58:30 UTC
278ce19 Add R program with plot to created Figure 6 in BUGS manual. Add stanified version 07 August 2015, 09:53:12 UTC
45737f3 Corrected WinBUGS link. Links are still incorrect in the individiual files, will be corrected in bulk later. 07 August 2015, 09:51:57 UTC
a3a1dd7 Add constrained to zero coefficients as in chapter 3.1 of BUGS manual 07 August 2015, 07:23:59 UTC
ddbae9d Add R test program for seeds (BUGS vol 1, 3) Add simplified version that does not use tau but estimates sigma directly. Narrower alpha priors (from 1000 to 1) 06 August 2015, 15:23:52 UTC
e928913 Vectorize Pump example Check random default initialization Compare with BUGS result in manual 06 August 2015, 13:31:34 UTC
fffb2c7 Delete duplicate data files. Add rats_stanified, with flat priors and avoiding sigma-squared detours. Print mean and stddev for all models, BUGS and Gelfand (original citation). 05 August 2015, 15:18:19 UTC
c3a5823 Corrected pilot examples to be close to ARM13.5 The suggested correction in http://stats.stackexchange.com/questions/143359/when-is-mu-a-used-in-this-stan-example is not correct. Changed variable names to those used in equation 13.9, i.e. gamma and delta instead of a and b. Removed unused mu_a and mu_b, and added common mu to really force gamma and delta into approx N(0,). 04 August 2015, 12:44:27 UTC
11c3a19 Quick and dirty R script to find the stan files without sample R As of Aug 4, 2015 ./Ch.10/sesame_one_pred_2b.stan ./Ch.10/sesame_one_pred_b.stan ./Ch.12/radon_group_chr.stan ./Ch.12/radon_intercept_chr.stan ./Ch.12/radon_no_pool_chr.stan ./Ch.13/13.4_UnderstandingCorrelationsBetweenIntercepts&Slopes.R ./Ch.13/earnings_latin_square_chr.stan ./Ch.13/earnings_vary_si_chr.stan ./Ch.13/pilots_chr.stan ./Ch.13/radon_inter_vary_chr.stan ./Ch.13/radon_vary_si_chr.stan ./Ch.14/pilots_chr.stan ./Ch.16/16.3_FittingAndUnderstangingAVaryingInterceptMultilevelModelUsingRStan.R ./Ch.17/17.2_radon_multi_varying_coef.stan ./Ch.17/17.5_multilevel_poisson.stan ./Ch.17/17.6_multilevel_ordered_categorical.stan ./Ch.17/17.7_latent_glm.stan ./Ch.17/17.7_robit.stan ./Ch.19/item_response.stan ./Ch.19/radon_chr.stan ./Ch.19/radon_redundant_chr.stan ./Ch.20/hiv_chr.stan ./Ch.20/hiv_inter_chr.stan ./Ch.21/finite_populations.stan ./Ch.21/multiple_comparison.stan ./Ch.21/r_sqr.stan ./Ch.21/radon_vary_intercept_floor.stan ./Ch.21/radon_vary_intercept_floor_chr.stan ./Ch.21/radon_vary_intercept_floor2_chr.stan ./Ch.21/radon_vary_intercept_nofloor_chr.stan ./Ch.22/anova_radon_nopred_chr.stan ./Ch.23/educational_subsidy.stan ./Ch.23/electric.stan ./Ch.23/electric_1a_chr.stan ./Ch.23/electric_1b_chr.stan ./Ch.23/electric_1c_chr.stan ./Ch.23/electric_chr.stan ./Ch.24/dogs_check.stan ./Ch.24/dogs_log.stan ./Ch.3/kidscore_momhs.stan ./Ch.4/earn_height.stan ./Ch.8/8.2_FakeDataSimulationToUnderstandResidualPlots.R 04 August 2015, 12:39:27 UTC
f35dde5 removing accidental checked in files 18 June 2015, 20:33:59 UTC
e2b3b0e Merge branch 'master' of https://github.com/stan-dev/example-models 18 June 2015, 20:29:32 UTC
2938a4a Merge pull request #24 from stan-dev/irt-knitr Irt knitr, dorazio-royle knitr, sur, multivariate probit 18 June 2015, 20:27:08 UTC
3503cd7 added bunch of models, not just irt 18 June 2015, 20:25:46 UTC
e67c3f1 Merge pull request #22 from singmann/master Small corrections to Rate Example 11 June 2015, 13:49:57 UTC
8a542c1 irt models for Michael, beginning 08 June 2015, 22:39:19 UTC
2ed05a5 renamed files to Geurts (from Greuts) 02 June 2015, 21:39:02 UTC
5619288 cosmetic changes to code 02 June 2015, 21:37:30 UTC
b55ace8 prior missing: between-subjects rate comparsion Example of Geurts data from Lee & Wagenmakers, prior for effect size delta was missing. 02 June 2015, 21:24:57 UTC
5d48038 clarified divergence criterion after warmup 12 May 2015, 14:35:18 UTC
102b0af updated some specifics on model fit testing updates from Michael Betancourt email to stan-dev 11 May 2015, 16:11:54 UTC
3ea8af3 Merge pull request #8 from stan-dev/feature/speedup-bugs-schools Feature/speedup bugs schools 24 April 2015, 19:13:03 UTC
198cef9 Merge pull request #20 from stan-dev/stan-egs-import Stan egs import 24 April 2015, 19:12:45 UTC
2a361a0 models brought over from stan branches 22 March 2015, 05:01:54 UTC
1235447 Merge branch 'master' of https://github.com/stan-dev/example-models 20 February 2015, 00:13:51 UTC
250680b Merge pull request #18 from stan-dev/feature/cleanup-old-models Cleaning up of old models 30 January 2015, 08:03:31 UTC
42746ec removing old models that were meant for testing only 30 January 2015, 08:02:38 UTC
a48bd9c Merge pull request #17 from master/fix_lda fix sim-lda script Thanks --- that one was my fault. I keep forgetting to clear the environment before testing the scripts. 08 January 2015, 17:57:32 UTC
cf36c6f fix sim-lda script 08 January 2015, 15:47:10 UTC
908c45f improve Cheating model 05 January 2015, 23:47:53 UTC
f9a9916 fix plot in Survey 23 December 2014, 00:52:53 UTC
6b5c674 fix plot in Rate_5 21 December 2014, 16:57:25 UTC
8ad9a40 fix plot in Rate_4 20 December 2014, 23:11:11 UTC
ae42e9a Merge pull request #11 from DBWright/patch-2 Update Kappa_Stan.R 18 December 2014, 22:06:52 UTC
87b91bd Update Kappa_Stan.R n was not defined 18 December 2014, 15:14:37 UTC
0f8d639 update readme.md 07 December 2014, 19:48:14 UTC
1410af4 add NumberConcept models 07 December 2014, 19:16:47 UTC
5de6427 update MPT models 07 December 2014, 19:16:32 UTC
edd9bbd Merge branch 'master' of https://github.com/stan-dev/example-models 05 December 2014, 19:51:36 UTC
c962bc2 removed extraneous 100x scaling of mu_a 07 November 2014, 01:14:37 UTC
39d2ec9 delete duplicate rstan models 20 October 2014, 16:56:55 UTC
a9f1502 Merge pull request #9 from bnicenboim/patch-1 Fixed bug in ChangeDetection_Stan.R 17 October 2014, 07:56:30 UTC
2281e82 Update ChangeDetection_Stan.R The function stan wasn't using the model stored in "model" (it was self referencing to sample) and not working. 17 October 2014, 07:46:30 UTC
a3d0df6 add empty TwoCountryQuiz model file 16 October 2014, 20:53:33 UTC
d3fc6ad improve GCM_3_optimized model 16 October 2014, 20:52:40 UTC
ac43df8 add models from Heuristic Decision Making chapter 16 October 2014, 20:52:18 UTC
19eb201 fix model Gaussian 16 October 2014, 20:51:01 UTC
45647e5 Merge branch 'master' of https://github.com/stan-dev/example-models into feature/speedup-bugs-schools 15 October 2014, 20:04:06 UTC
d46bc65 add GCM models 03 October 2014, 21:34:54 UTC
c003b1e Merge pull request #4 from stan-dev/update_openbugs_url change url of openbugs from openbugs.info to openbugs.net 03 October 2014, 14:37:23 UTC
2eb57b6 Merge pull request #6 from kforeman/patch-1 Thanks . They somehow lost their domain and wound up with squatters. I thought we'd updated all the links, but apparently not. 01 October 2014, 19:57:08 UTC
e1badfc fix openbugs url openbugs.info seems to have disappeared, now at openbugs.net 01 October 2014, 19:40:18 UTC
5e9c505 change url of openbugs from openbugs.info to openbugs.net It seems that openbugs.info points to japanese website 22 September 2014, 15:25:52 UTC
13e7727 optimized, modified, and ben tricked model versions for schools 21 September 2014, 20:23:34 UTC
a223bcb add link to spreadsheet in readme 12 September 2014, 13:27:31 UTC
244b19e add MPT models 12 September 2014, 13:27:07 UTC
3a6887d separate models and data 1 11 September 2014, 16:30:47 UTC
7017e58 duplicate all in one R-scripts to separate folder 11 September 2014, 16:29:35 UTC
712427b added guide to contributing new models 09 September 2014, 21:02:43 UTC
ef57b5a grouped entries in top-level index 09 September 2014, 18:28:20 UTC
42c7f51 add CaseStudies models 06 September 2014, 12:00:58 UTC
a85ab98 add models for 3rd chapter 01 September 2014, 21:40:41 UTC
2d783a3 add acknowledgement 31 August 2014, 08:46:16 UTC
bbd138d spellproof 27 August 2014, 09:33:00 UTC
fa973b4 some improvements 26 August 2014, 19:42:49 UTC
2ed61be to markdown 26 August 2014, 18:15:12 UTC
5eb7b7e Finished models for first 2 chapters 26 August 2014, 18:03:08 UTC
40a1a89 updated links and license 11 August 2014, 20:46:30 UTC
8b26571 Merge pull request #2 from stan-dev/add-readme Add readme 11 August 2014, 20:42:38 UTC
eb08d71 add licensing 11 August 2014, 20:40:45 UTC
8e969ba updated readme 11 August 2014, 20:34:16 UTC
94515bf add read me 11 August 2014, 20:31:40 UTC
d09a5f3 issue 782: stan/src/models/misc/gaussian-process/gp-fit.stan will be the same as the model written in the manual 19 July 2014, 17:53:37 UTC
1aba68a fixed typo in 12.3 ARM 11 July 2014, 13:23:07 UTC
88bbf51 Merge pull request #608 from stan-dev/feature/fix-issue-589-vectorize-multi_normal Fixes #589. Feature/fix issue 589 vectorize multi normal 07 July 2014, 21:41:00 UTC
6fc5210 fixed R script, updated README, polls.dat now has 1 row per survey 07 July 2014, 18:03:49 UTC
ac8e1f4 Merge pull request #709 from stan-dev/feature/ARM Fixes #707. Feature/arm models 03 July 2014, 13:03:07 UTC
876f973 updated ch24 ARM models 30 June 2014, 18:42:56 UTC
d9157c2 updated rest of Ch17 ARM models with R files 30 June 2014, 18:19:55 UTC
346b846 updated 17.1-17.3 models with R file 30 June 2014, 17:55:38 UTC
5db0986 fixed file names so they work with wiki links 30 June 2014, 16:04:14 UTC
26a55b4 added rest of ch17 prelim models 30 June 2014, 14:30:42 UTC
47dd176 added 17.3-17.6 preliminary models 28 June 2014, 21:29:18 UTC
afd307b add 17.2 models and changed naming of 17.1 models 28 June 2014, 17:07:29 UTC
d036390 added preliminary 17.1 stan model code 28 June 2014, 16:41:22 UTC
77f1f38 Create radon_wishart.stan 28 June 2014, 16:40:55 UTC
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