a806b62 | Artem Artemev | 01 January 2018, 16:52:19 UTC | Initiate porting from testing environment. | 01 January 2018, 16:52:19 UTC |
140a53c | Alexander G. de G. Matthews | 14 December 2017, 09:49:06 UTC | Merge pull request #592 from GPflow/awav/pandas-pretty-printing Pandas Model/Parameters printing. | 14 December 2017, 09:49:06 UTC |
d0937b2 | Alexander G. de G. Matthews | 13 December 2017, 20:38:23 UTC | Merge branch 'master' into awav/pandas-pretty-printing | 13 December 2017, 20:38:23 UTC |
3c78e4f | Alexander G. de G. Matthews | 11 December 2017, 01:28:40 UTC | Merge pull request #596 from GPflow/remove_likelihood_checks removed _check_targets | 11 December 2017, 01:28:40 UTC |
01d0a7a | Artem Artemev | 10 December 2017, 23:55:21 UTC | Update notebooks from master branch. | 10 December 2017, 23:55:21 UTC |
b6ff40e | Hugh Salimbeni | 10 December 2017, 22:16:11 UTC | removed _check_targets | 10 December 2017, 22:16:11 UTC |
158af0e | Artem Artemev | 08 December 2017, 22:39:28 UTC | Re-run notebooks with new printing. | 08 December 2017, 22:39:28 UTC |
186419c | Artem Artemev | 08 December 2017, 22:08:53 UTC | Cover pandas printing for Parameter, DataHolder and Parameterized instances. | 08 December 2017, 22:08:53 UTC |
6582f41 | Alexander G. de G. Matthews | 08 December 2017, 02:39:53 UTC | Merge pull request #586 from GPflow/awav/replace-tf-float-and-int Standardize float type | 08 December 2017, 02:39:53 UTC |
cfa59ce | Alexander G. de G. Matthews | 08 December 2017, 02:29:21 UTC | Merge branch 'master' into awav/replace-tf-float-and-int | 08 December 2017, 02:29:21 UTC |
e67b457 | Artem Artemev | 07 December 2017, 21:41:14 UTC | Tests for deprecation messages. | 07 December 2017, 21:41:14 UTC |
81c4b55 | Artem Artemev | 07 December 2017, 20:28:56 UTC | Use new pandas tables in notebooks. | 07 December 2017, 20:28:56 UTC |
e923230 | Alexander G. de G. Matthews | 07 December 2017, 16:55:09 UTC | Merge pull request #589 from GPflow/awav/documentation Documentation fixes. | 07 December 2017, 16:55:09 UTC |
22f450d | Alexander G. de G. Matthews | 07 December 2017, 00:00:17 UTC | Merge branch 'master' into awav/documentation | 07 December 2017, 00:00:17 UTC |
0ef8e3d | Artem Artemev | 06 December 2017, 23:28:29 UTC | Remove redundant destination string for comparison. | 06 December 2017, 23:28:29 UTC |
f413633 | Artem Artemev | 06 December 2017, 23:17:04 UTC | Parameter representation returns str type. | 06 December 2017, 23:17:04 UTC |
e153901 | Artem Artemev | 06 December 2017, 16:49:34 UTC | Pretty printing using pandas structure. | 06 December 2017, 16:49:34 UTC |
8a1376b | Artem Artemev | 05 December 2017, 14:29:24 UTC | Merge master into branch. Resolve conflicts. | 05 December 2017, 14:29:24 UTC |
942fe22 | Artem Artemev | 05 December 2017, 00:19:41 UTC | Rename np_float[int] to float[int]_type. | 05 December 2017, 00:19:41 UTC |
f70e2dc | Alexander G. de G. Matthews | 04 December 2017, 19:33:04 UTC | Merge branch 'master' into awav/replace-tf-float-and-int | 04 December 2017, 19:33:04 UTC |
c3d5f28 | st-- | 04 December 2017, 11:54:56 UTC | Improve nomenclature (issue #504) (#570) * improve kernel nomenclature #504 * add deprecation errors for renames * give uncertain_conditional explicit kwargs as well * conditional(..., whiten=...) -> conditional(..., white=...) * updates to regression notebook | 04 December 2017, 11:54:56 UTC |
c951c3a | Artem Artemev | 04 December 2017, 09:41:08 UTC | Fixes for notebooks. Renaming feat => feature. | 04 December 2017, 09:41:08 UTC |
e5b8cfe | Mark van der Wilk | 02 December 2017, 10:34:11 UTC | Small spelling | 02 December 2017, 10:34:11 UTC |
79e0815 | Artem Artemev | 01 December 2017, 10:54:37 UTC | Clarify variables naming at assign Parameter's method. | 01 December 2017, 10:54:37 UTC |
399e732 | Artem Artemev | 01 December 2017, 00:45:12 UTC | Normalize tf floats and ints. | 01 December 2017, 00:45:12 UTC |
cf629d5 | James Hensman | 29 November 2017, 00:08:29 UTC | Merge pull request #581 from GPflow/readme-py3 Mention Python 3 in README.md | 29 November 2017, 00:08:29 UTC |
0656d41 | Mark van der Wilk | 28 November 2017, 11:07:17 UTC | Merge branch 'master' into readme-py3 | 28 November 2017, 11:07:17 UTC |
5b60cb4 | Mark van der Wilk | 28 November 2017, 11:07:09 UTC | Update README.md | 28 November 2017, 11:07:09 UTC |
c98cd3c | James Hensman | 28 November 2017, 10:17:56 UTC | updates to regression notebook (#584) | 28 November 2017, 10:17:56 UTC |
0588a3c | Mark van der Wilk | 28 November 2017, 08:38:05 UTC | Merge pull request #583 from GPflow/awav/improve-uncertain-conditional-test Improve uncertain conditional test | 28 November 2017, 08:38:05 UTC |
27ef3ce | Mark van der Wilk | 28 November 2017, 08:33:45 UTC | Fix spelling error. | 28 November 2017, 08:33:45 UTC |
04d5d95 | Artem Artemev | 27 November 2017, 22:30:14 UTC | Merge branch 'master' into awav/improve-uncertain-conditional-test | 27 November 2017, 22:30:14 UTC |
52ecfab | Artem Artemev | 27 November 2017, 22:27:32 UTC | [#577] Improvement to improvement of tests in uncertain conditional test. | 27 November 2017, 22:27:32 UTC |
4a58b6e | Mark van der Wilk | 27 November 2017, 19:54:47 UTC | Mention Python 3 in README.md | 27 November 2017, 19:54:47 UTC |
d86af28 | James Hensman | 27 November 2017, 14:36:44 UTC | Merge pull request #573 from GPflow/chain_transform Chain transform helper | 27 November 2017, 14:36:44 UTC |
a79d97f | James Hensman | 27 November 2017, 14:06:46 UTC | reverting test edits | 27 November 2017, 14:06:46 UTC |
8f2f491 | James Hensman | 27 November 2017, 14:00:50 UTC | Merge branch 'master' into chain_transform | 27 November 2017, 14:00:50 UTC |
3df130f | Mark van der Wilk | 26 November 2017, 20:15:01 UTC | Merge pull request #580 from GPflow/awav/minibatch-iterator Exclusive behaviour for Minibatch | 26 November 2017, 20:15:01 UTC |
559c6de | Mark van der Wilk | 26 November 2017, 15:54:58 UTC | Merge branch 'master' into awav/minibatch-iterator | 26 November 2017, 15:54:58 UTC |
4770c34 | Mark van der Wilk | 26 November 2017, 15:46:17 UTC | Merge pull request #579 from GPflow/awav/kernel-quadrature-speedup-test Speed up some ekernels test on 40%. | 26 November 2017, 15:46:17 UTC |
25520f4 | Artem Artemev | 26 November 2017, 12:54:21 UTC | Fix test. Minibatch must not be re-initialized at each iteration, but keep reading and shuffling data, so that previous values are different. | 26 November 2017, 12:54:21 UTC |
706cb48 | Artem Artemev | 26 November 2017, 12:32:07 UTC | Exclude minibatch iterators from auto-initialization. | 26 November 2017, 12:32:07 UTC |
ece68fb | Artem Artemev | 26 November 2017, 09:48:59 UTC | Remove unnecessary 'session_context' from top of the 'test_exp_quadrature_diag' test. | 26 November 2017, 12:08:26 UTC |
75435e3 | Artem Artemev | 26 November 2017, 09:40:37 UTC | Speed up some ekernels test on 40%. | 26 November 2017, 09:40:37 UTC |
28070e7 | Artem Artemev | 25 November 2017, 12:52:36 UTC | 10x speed up likelihood test. (#576) | 25 November 2017, 12:52:36 UTC |
30120a1 | Artem Artemev | 25 November 2017, 12:33:07 UTC | Address issues #568, #561 (#575) * Add a bunch of test for Parameter and DataHolder. Minibatch seed can be changed after cleaning or in defer_build. * Add dataholder tests. * Add failure creation tests to data holders. * Shape and dtype for dataholders work for external tensors. * According fix in dataholder test. * Change travis file. * Experiments with travis. * Improvements in Parameterized tests. * Exclude external optimizer from coverage report. * Improvements in optimizer tests. * Indent functions in optimizer's tests. * Increase coverage in Parameterized. * Increase codecov for Parameterized. * Developing test coverage further. * Tests Parameterized feeds. * Call parameter size in tests. * 100% for ParamList. * Minibatch tests. * Increase coverage for Minibatch. * Setup.py clean up. Stick to 1.4 tensorflow version. Remove backwards for py2.7. * Increase coverage for Parameters. * Increase coverage for Parameters build check. * Core tests for TensorConverter. * Code coverage targets. * Change initialization policy at decors and trainers. * Check initialization status of variable using tf.is_variable_initialized tensor. * [#568] Improve initialization status checking performance. * [#568, #561] Test for Dataset iterators is not possible. * Increase coverage for Parameter. method was added, therefore required some tests. method inconsistently handled session inputs. * Added more tests for Parameter object covering cases when tensor is trainable and parameter is not. Also added test for Parameter string conversion. | 25 November 2017, 12:33:07 UTC |
6211222 | Mark van der Wilk | 24 November 2017, 17:32:37 UTC | Improve docstring. | 24 November 2017, 17:32:37 UTC |
6a5e6a0 | ST John | 24 November 2017, 16:32:13 UTC | fix tests | 24 November 2017, 16:32:13 UTC |
1a886fc | James Hensman | 24 November 2017, 14:20:16 UTC | Merge branch 'chain_transform' of github.com:GPflow/GPflow into chain_transform | 24 November 2017, 14:20:16 UTC |
f4559a3 | James Hensman | 24 November 2017, 14:18:47 UTC | Some simplifications for DiagMatrix class | 24 November 2017, 14:18:47 UTC |
13e16a6 | ST John | 24 November 2017, 11:57:14 UTC | minor cleanup | 24 November 2017, 11:57:14 UTC |
b313409 | James Hensman | 24 November 2017, 11:10:22 UTC | adding hosekeeping for chaining transforms and simple test | 24 November 2017, 11:10:22 UTC |
cef3876 | James Hensman | 24 November 2017, 10:55:52 UTC | merge in test)_transforms | 24 November 2017, 10:55:52 UTC |
2cb1a4a | ST John | 23 November 2017, 21:24:36 UTC | add test | 23 November 2017, 21:24:36 UTC |
f42cab0 | ST John | 23 November 2017, 18:18:31 UTC | add positiveRescale transform combination | 23 November 2017, 18:18:31 UTC |
01c2aa3 | st-- | 23 November 2017, 18:10:46 UTC | Chain transform (#541) * Chain transform * fix abstract interface ITransform * doc changes * fix Rescale jacobian * enable chaining of transforms using __call__ * tests for transformation chaining * add tests for code coverage * add docstrings * add docstring to ITransform | 23 November 2017, 18:10:46 UTC |
a429265 | ST John | 23 November 2017, 17:45:49 UTC | add docstring to ITransform | 23 November 2017, 17:45:49 UTC |
17f736a | ST John | 23 November 2017, 17:25:46 UTC | add docstrings | 23 November 2017, 17:25:46 UTC |
8153ffa | ST John | 23 November 2017, 16:46:50 UTC | add tests for code coverage | 23 November 2017, 16:46:50 UTC |
a3aa873 | Mark van der Wilk | 23 November 2017, 16:23:34 UTC | Merge branch 'master' into chain_transform | 23 November 2017, 16:23:34 UTC |
076ae06 | vdutor | 23 November 2017, 16:22:03 UTC | Moment matching for uncertain conditional (#536) * Add Features base classes * Convert SGPR and SVGP models to use InducingFeatures (including backwards compatibility) * Fix tests * Added Multiscale feature. To show the generality of the inter-domain code. * Fixed py2 metaclass issue, as per John Bradshaw's suggestion. * Improve docstrings, register Multiscale feature * Change SGPR models to determine feature length dynamically [but feature.__len__() still needs to be made dynamic as well!] * Bits and pieces missed in the merge. * Add features to __init__. * Fixed incorrect parameter dtype assignment on compile. * kernel expectations for inducing point features * Added `uncertain_conditional` (not run, untested). * Uncertain conditional, only for whitened case * Uncertain conditional tested, only whitened case * Uncertain conditional * Unittests for uncertain conditional * Update test_uncertain_conditional.py Fix tests that wouldn't have run due to being hidden in a generator expression * Uncertain conditional without full output covariance * Added quadrature tests * Two bugfixs. - Static assignment of len(feature) - Upper bound mixin referred to Z. * Fixed bugs in multiscale & added features. * Added tests for `Multiscale` inducing features. * Moved uncertain conditional test to new testing directory. * Updated `RELEASE.md`, and small changes for tests. * add test for len(feature) * Deprecation property for `Z`, relative imports, improved test. * `SGPMC` has inducing features now + better docstrings. * Fixed `SGPMC`. * Add a bunch of test for Parameter and DataHolder. Minibatch seed can be changed after cleaning or in defer_build. * Add dataholder tests. * Add failure creation tests to data holders. * Shape and dtype for dataholders work for external tensors. * According fix in dataholder test. * Change travis file. * Experiments with travis. * Improvements in Parameterized tests. * Exclude external optimizer from coverage report. * Improvements in optimizer tests. * Indent functions in optimizer's tests. * Increase coverage in Parameterized. * Increase codecov for Parameterized. * Developing test coverage further. * Tests Parameterized feeds. * Call parameter size in tests. * 100% for ParamList. * Minibatch tests. * Increase coverage for Minibatch. * Setup.py clean up. Stick to 1.4 tensorflow version. Remove backwards for py2.7. * Increase coverage for Parameters. * Increase coverage for Parameters build check. * Core tests for TensorConverter. * Code coverage targets. * `feat` now `feature` + other changes. * Update _version.py * Fix small import errors. * change exception * Fix broken unit tests * Add no cover pragma and remove unused functions | 23 November 2017, 16:22:03 UTC |
edbc289 | ST John | 23 November 2017, 16:11:02 UTC | tests for transformation chaining | 23 November 2017, 16:11:02 UTC |
d4a6251 | ST John | 23 November 2017, 16:10:39 UTC | enable chaining of transforms using __call__ | 23 November 2017, 16:10:39 UTC |
bec13b9 | ST John | 23 November 2017, 16:10:22 UTC | fix Rescale jacobian | 23 November 2017, 16:10:22 UTC |
0cf8024 | Mark van der Wilk | 23 November 2017, 13:49:21 UTC | Fixed SVGP minibatch issue, plus regression test. | 23 November 2017, 14:23:56 UTC |
8b3ced9 | Alexander G. de G. Matthews | 21 November 2017, 16:53:08 UTC | Merge pull request #567 from GPflow/explicit-kwargs Explicit kwargs | 21 November 2017, 16:53:08 UTC |
fe6e6e6 | ST John | 15 November 2017, 11:35:11 UTC | explicit kwargs for conditionals | 20 November 2017, 18:06:04 UTC |
a578ec3 | ST John | 20 November 2017, 17:55:58 UTC | Merge branch 'master' of https://github.com/GPflow/GPflow | 20 November 2017, 17:55:58 UTC |
6c35a7a | Mark van der Wilk | 20 November 2017, 17:43:17 UTC | Inter-domain features for GPflow 1.0 (#530) * Add Features base classes * Convert SGPR and SVGP models to use InducingFeatures (including backwards compatibility) * Fix tests * Added Multiscale feature. To show the generality of the inter-domain code. * Fixed py2 metaclass issue, as per John Bradshaw's suggestion. * Improve docstrings, register Multiscale feature * Change SGPR models to determine feature length dynamically [but feature.__len__() still needs to be made dynamic as well!] * Bits and pieces missed in the merge. * Add features to __init__. * Fixed incorrect parameter dtype assignment on compile. * Two bugfixs. - Static assignment of len(feature) - Upper bound mixin referred to Z. * Fixed bugs in multiscale & added features. * Added tests for `Multiscale` inducing features. * Updated `RELEASE.md`, and small changes for tests. * add test for len(feature) * Deprecation property for `Z`, relative imports, improved test. * `SGPMC` has inducing features now + better docstrings. * Fixed `SGPMC`. * Testing now uses tf1.4. * `feat` now `feature` + other changes. * Update _version.py * change exception | 20 November 2017, 17:43:17 UTC |
0741f86 | Artem Artemev | 20 November 2017, 14:48:53 UTC | Increase test coverage. (#565) * Add a bunch of test for Parameter and DataHolder. Minibatch seed can be changed after cleaning or in defer_build. * Add dataholder tests. * Add failure creation tests to data holders. * Shape and dtype for dataholders work for external tensors. * According fix in dataholder test. * Change travis file. * Experiments with travis. * Improvements in Parameterized tests. * Exclude external optimizer from coverage report. * Improvements in optimizer tests. * Indent functions in optimizer's tests. * Increase coverage in Parameterized. * Increase codecov for Parameterized. * Developing test coverage further. * Tests Parameterized feeds. * Call parameter size in tests. * 100% for ParamList. * Minibatch tests. * Increase coverage for Minibatch. * Setup.py clean up. Stick to 1.4 tensorflow version. Remove backwards for py2.7. * Increase coverage for Parameters. * Increase coverage for Parameters build check. * Core tests for TensorConverter. * Code coverage targets. | 20 November 2017, 14:48:53 UTC |
f42fc3e | Artem Artemev | 16 November 2017, 12:11:43 UTC | Merge pull request #560 from GPflow/artemav/fixing-notebooks Fixes at `multiclass` and `models` notebooks. | 16 November 2017, 12:11:43 UTC |
17971da | Artem Artemev | 16 November 2017, 10:51:58 UTC | Docstring for value method. | 16 November 2017, 10:51:58 UTC |
6c0f367 | Artem Artemev | 16 November 2017, 10:36:27 UTC | Merge branch 'master' into artemav/fixing-notebooks | 16 November 2017, 10:36:27 UTC |
05a7127 | Artem Artemev | 16 November 2017, 10:31:55 UTC | Merge branch 'master' of github.com:GPflow/GPflow | 16 November 2017, 10:31:55 UTC |
36043d7 | Artem Artemev | 16 November 2017, 09:55:19 UTC | get_variable_by_name has different arguments, it is not possible to unify these tests with get_tensor_by_name. | 16 November 2017, 09:55:19 UTC |
9f060ac | Artem Artemev | 16 November 2017, 09:40:10 UTC | Fix in misc test at get_variable_by_name function. | 16 November 2017, 09:40:10 UTC |
c5e638c | Artem Artemev | 16 November 2017, 09:28:37 UTC | Fix in misc test. | 16 November 2017, 09:28:37 UTC |
c452eae | Artem Artemev | 16 November 2017, 09:25:36 UTC | Remove filter for tests directory in 'codecov' yaml configuration. | 16 November 2017, 09:25:36 UTC |
456c478 | Artem Artemev | 16 November 2017, 09:21:11 UTC | Clear caches for FITCvsVFE.ipynb. | 16 November 2017, 09:21:11 UTC |
c6f700b | Alexander G. de G. Matthews | 16 November 2017, 09:03:06 UTC | Merge pull request #556 from GPflow/value-property adding value property | 16 November 2017, 09:03:06 UTC |
784d4bb | Artem Artemev | 16 November 2017, 01:42:08 UTC | Variable is always initializable in misc. | 16 November 2017, 01:42:08 UTC |
981dfe6 | Artem Artemev | 16 November 2017, 01:36:41 UTC | Correcting misc module. | 16 November 2017, 01:36:41 UTC |
981d423 | Artem Artemev | 16 November 2017, 01:27:26 UTC | Add tests to misc test cases. | 16 November 2017, 01:27:26 UTC |
cf70789 | Artem Artemev | 16 November 2017, 01:11:09 UTC | Add test_misc.py. | 16 November 2017, 01:11:09 UTC |
9216f88 | Artem Artemev | 16 November 2017, 01:05:13 UTC | Increase coverage for misc.py. | 16 November 2017, 01:05:13 UTC |
29e26f8 | Artem Artemev | 16 November 2017, 00:57:48 UTC | Increase coverage for misc file. | 16 November 2017, 00:57:48 UTC |
e25f0ab | Artem Artemev | 15 November 2017, 23:53:47 UTC | Ignore file. | 15 November 2017, 23:53:47 UTC |
e2d40d1 | Artem Artemev | 15 November 2017, 23:08:50 UTC | Fixes at notebooks multiclass and models. | 15 November 2017, 23:08:50 UTC |
88ddcb8 | Artem Artemev | 15 November 2017, 21:12:02 UTC | Fixing tests for assign & read_values modifications at parameterized object. | 15 November 2017, 21:12:02 UTC |
4e295b5 | Alexander G. de G. Matthews | 15 November 2017, 14:18:31 UTC | Merge branch 'master' into value-property | 15 November 2017, 14:18:31 UTC |
4ff00cb | Mark van der Wilk | 15 November 2017, 13:15:30 UTC | Using `fixed` now throws error. (#559) * Using `fixed` now throws error. * Tests now don't refer to `.fixed` any more. | 15 November 2017, 13:15:30 UTC |
188d678 | James Hensman | 15 November 2017, 12:09:12 UTC | Merge branch 'master' into value-property | 15 November 2017, 12:09:12 UTC |
4788b59 | Mark van der Wilk | 15 November 2017, 12:08:05 UTC | Update RELEASE.md (#558) | 15 November 2017, 12:08:05 UTC |
3875119 | ST John | 15 November 2017, 11:19:36 UTC | add tests for `value` property | 15 November 2017, 11:19:36 UTC |
249bb21 | ST John | 15 November 2017, 11:14:05 UTC | Merge branch 'master' of https://github.com/GPflow/GPflow | 15 November 2017, 11:14:05 UTC |
a22b850 | ST John | 15 November 2017, 11:11:19 UTC | Merge branch 'master' of https://github.com/GPflow/GPflow into chain_transform | 15 November 2017, 11:11:19 UTC |
7724e4e | Artem Artemev | 15 November 2017, 09:41:32 UTC | Tests for pandas frame in parameterized assign. | 15 November 2017, 09:41:32 UTC |
b75251b | Artem Artemev | 14 November 2017, 23:29:16 UTC | Pandas Series is acceptable in assign operation. | 14 November 2017, 23:29:16 UTC |
fc8ea51 | Artem Artemev | 14 November 2017, 23:18:38 UTC | Add read_values feature for parameterized objects. | 14 November 2017, 23:18:38 UTC |
56b4689 | Artem Artemev | 13 November 2017, 23:14:28 UTC | Initializing must not be persevering. | 13 November 2017, 23:14:28 UTC |