https://github.com/biochem-fan/cheetah

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Revision Author Date Message Commit Date
c5345f9 Added powderMax 03 February 2014, 00:56:09 UTC
34e51ef Fixed broken line-breaks. 28 January 2014, 13:03:54 UTC
eed5df9 Added updated version of FindPSANA.cmake (needed for compatibility with the newer versions of psana, with BldEBeamDataV4) 17 January 2014, 19:46:18 UTC
ccaf9b5 Added warning about new keyword in psana.conf 26 November 2013, 15:16:11 UTC
ebf4d06 End of shift 3 commits 24 November 2013, 17:53:38 UTC
4231cbd IDL8.2 compatibility: Fixed annoying bug in the way IDL handled headers in read_csv() function (and undocumented side-effect of something) 23 November 2013, 06:19:06 UTC
c762806 Small updates and fixes 23 November 2013, 05:12:21 UTC
bb72424 Added FEEspectrum in-line photon energy spectrometer 22 November 2013, 11:25:02 UTC
aac4324 Added radial background subtraciton option (surprisingly effective in some cases - and fast) 22 November 2013, 06:18:58 UTC
47d31b0 www update 08 November 2013, 20:37:31 UTC
df9063d Fixes during 2dx beamtime 06 November 2013, 05:46:10 UTC
ee5954c Added BlsDataEBeamV4 (needed to read wavelength etc as of 1 November) 01 November 2013, 22:57:37 UTC
52c35c8 Array bounds check in peak list handling 24 October 2013, 20:56:41 UTC
88d92c1 Added support for CspadV1 (reverted in the middle of an experiment) 23 October 2013, 07:33:10 UTC
8dfa856 Added missing mutexes from the free-lock-condition trap (cause of stalling??) 21 October 2013, 14:56:28 UTC
8930b02 Added hitfinder/peakfinder 8 - aims to estimate appropriate thresholds based solely on specified signal:noise criterion (ie: no ADC threshold, this is estimated automatically). Like all things automatic, it can go awry, so use at your own risk. 21 October 2013, 12:08:30 UTC
a852c3f Improved histograms, with region of interest selection capability (making the histograms much more manageable in size) 19 October 2013, 12:17:42 UTC
76103e4 Added peak-based powder plots; tweaked peak finder for single pixel peaks; some updates to GUI stuff 03 October 2013, 14:59:39 UTC
4d25e0d Small changes to the web site 02 October 2013, 21:03:41 UTC
bcbfde5 Small updates 25 September 2013, 12:06:32 UTC
d6643ec Fast scan does not work for all hitfinders (yet) 01 August 2013, 08:48:35 UTC
64f2a1a Added WAXS processing scripts 11 July 2013, 14:51:47 UTC
bbe59fa Fixed a few bugs in gaincal generation 03 July 2013, 13:21:00 UTC
020dbec Free all mutexes when a deadlock condition is detected (cause of stalls?) 01 July 2013, 16:33:13 UTC
a959046 Fixed up peak separation filter 30 June 2013, 10:20:22 UTC
21a3431 Added fast peak screening on inner ASICs: now process at 15fps ! 29 June 2013, 07:36:26 UTC
cd1db4f Peakfinder tweaks 29 June 2013, 06:53:18 UTC
c397c04 Cleaned up unnecessary bits of the old peak list structures 29 June 2013, 06:46:36 UTC
8b80953 Fixes to new hitfinder operation 29 June 2013, 06:11:46 UTC
14cfa5a Revamped peakfinders so that they can be called in a more general way; updated the peaks.txt file to something easier to parse. 29 June 2013, 00:22:33 UTC
0f579af Small changes 27 June 2013, 15:46:53 UTC
ad64831 Added cspad-2x2 to the range of detector options 26 June 2013, 21:00:25 UTC
1a5b019 Made saving the pixel mask a default behaviour 26 June 2013, 19:21:15 UTC
3c46112 Added energy spectrum stacks 26 June 2013, 14:55:51 UTC
27a2f29 Chuncking of radial average stacks 26 June 2013, 13:37:11 UTC
7723cab Fixed another cause of lockups 26 June 2013, 13:01:02 UTC
51263a9 Added compression to yet more HDF5 files 25 June 2013, 22:42:49 UTC
08e3032 Added compression to HDF5 file saving 25 June 2013, 22:12:26 UTC
97494aa Fixed crash at end of run (cleaning up cxidb files that don't exist) 25 June 2013, 21:28:43 UTC
e85bc28 Updated crawler functions and slightly changed status file format 25 June 2013, 18:26:27 UTC
d9842b0 Minor changes 15 June 2013, 15:03:40 UTC
c624466 hitfinder: Updates to process multiple streams in parallel (-c keyword); unfortunately -s was already taken! 14 June 2013, 12:04:12 UTC
6870e41 Speedup: Assemble 2D images only when really needed. 1) Sum powder patterns in raw data only; assemble once right before writing to file; 2) Assemble image only for frames that will be saved. 14 June 2013, 10:34:54 UTC
f6eedab Save full powder pattern along with gaincal and darkcal (useful to have the additional statistics, for example to identify bad pixels). 14 June 2013, 08:24:48 UTC
c5f017a Fiducial not being read meant files were overwriting each other, causing HDF5 library errors. Added a fix using frame number as the fiducial if not read from XTC. Could happen to the timestamp as well. 13 June 2013, 19:28:33 UTC
6417446 Added more traps for thread lockup - need to add a timeout wherever waiting for all threads to exit 12 June 2013, 21:35:11 UTC
e2ecb74 Merge branch 'testing' of github.com:antonbarty/cheetah into testing 11 June 2013, 07:54:09 UTC
9e261ee Added multiple-streams-in-parallel version of hitfinder 11 June 2013, 07:53:41 UTC
5a69c39 Speed testing changes 10 June 2013, 18:40:25 UTC
270e46e Added a bunch of speed tests to worker for performance profiling 07 June 2013, 12:30:11 UTC
0b21303 Testing 07 June 2013, 10:16:35 UTC
03bd0e5 Speed testing 07 June 2013, 10:15:21 UTC
52b92b6 Speed testing 07 June 2013, 10:14:10 UTC
955bccb Added another speed test 07 June 2013, 10:08:50 UTC
307d160 Thread management won't bomb output with too many messages 07 June 2013, 10:05:39 UTC
e0c051f Testing 07 June 2013, 09:20:36 UTC
264f944 Don't forget to free event data in speed tests 07 June 2013, 09:14:45 UTC
03bd5b5 Wrong error message 07 June 2013, 09:07:36 UTC
1438d1b Prevent thread lockup - if nothing happens for 2 minutes, keep going anyway 07 June 2013, 08:53:35 UTC
2254cb3 Bug fix 07 June 2013, 08:29:22 UTC
91660e0 Bug fix 07 June 2013, 08:26:14 UTC
05af9bb Housekeeping in psana interface 07 June 2013, 08:23:49 UTC
75d7cbf Fiddling around with cheetah_ana_mod to improve efficiency 06 June 2013, 13:32:53 UTC
4e74c71 Minor changes to the crawler (robustness, etc) 06 June 2013, 10:00:07 UTC
b40c998 Fixed adding to powder twice 02 June 2013, 16:56:19 UTC
c4aabb9 Some modificaitons to the IDL viewer/crawler stuff 31 May 2013, 22:25:46 UTC
b27d293 Updating 31 May 2013, 15:26:31 UTC
7c5f5ec Merge branch 'anton' into testing Conflicts: idl/crawler_autorun.pro idl/crawler_hdf5.pro 30 May 2013, 22:24:58 UTC
3bf693a Updated autorun 30 May 2013, 22:22:11 UTC
591f1e5 Updated hdf5 crawler 25 May 2013, 19:03:53 UTC
c5ae1f0 Updated crawler_hdf5 to take advantage of little status file now written out by Cheetah 24 May 2013, 14:36:08 UTC
5cf01ce Merge branch 'anton' into testing 24 May 2013, 13:30:43 UTC
0fcd306 Fixed comilation error 24 May 2013, 13:18:49 UTC
6c3fde5 Merge branch 'developer' into anton Conflicts: source/cheetah.xcodeproj/project.pbxproj source/cheetah.xcodeproj/project.xcworkspace/xcuserdata/barty.xcuserdatad/UserInterfaceState.xcuserstate source/libcheetah/src/libcheetah.cpp source/libcheetah/src/setup.cpp source/libcheetah/src/worker.cpp 24 May 2013, 13:11:28 UTC
a855a67 Turns out having a histogram buffer was faster after all 24 May 2013, 12:59:45 UTC
01c71c9 Added soft link from /data/histogram to /data/data 24 May 2013, 12:50:33 UTC
75a388f Made integration of energy spectrum optional (it takes some time) 24 May 2013, 12:32:23 UTC
62c83bc Added a periodic status file (for crawler) 24 May 2013, 12:09:11 UTC
b6c3874 Removed histogram buffer from histogram writing - seemed to be taking more time than it was worth 24 May 2013, 11:54:32 UTC
4da078c Fixes to histogram statistics 24 May 2013, 09:16:24 UTC
8035db1 Fixed normalisaiton 21 May 2013, 13:24:55 UTC
eceaa81 Fixed some typos 21 May 2013, 13:07:19 UTC
2602769 Added more statistical measures (from Duane) 21 May 2013, 13:04:36 UTC
c1bb6a9 Added extra information to histogram HDF5 file 21 May 2013, 11:29:50 UTC
8a4fa90 Commented out the spectrometer for speed 21 May 2013, 01:47:02 UTC
6b46a31 Need to add histogram.cpp to CMakeLists file 21 May 2013, 01:29:26 UTC
6672ea0 Remember to add to histograms 21 May 2013, 01:24:31 UTC
1469a75 Added pixel histogramming capability 20 May 2013, 23:57:00 UTC
bbd0d71 Updated Xcode project 20 May 2013, 21:58:21 UTC
7b5a808 Updated crawler 18 May 2013, 05:57:52 UTC
9b831c3 Added config file to crawler_view 18 May 2013, 01:39:53 UTC
a252cb2 Merge branch 'developer' of github.com:antonbarty/cheetah into developer 15 May 2013, 19:58:51 UTC
32317ef Merge branch 'testing' into developer Conflicts: source/cheetah.xcodeproj/project.xcworkspace/xcuserdata/barty.xcuserdatad/UserInterfaceState.xcuserstate 15 May 2013, 19:58:28 UTC
8569c4d Merge branch 'developer' of github.com:antonbarty/cheetah into developer 07 May 2013, 08:54:35 UTC
0c3bba9 added writing to new datasets in saveCXI 07 May 2013, 08:54:15 UTC
69cb2b0 expand peak memory (avoid potential seg. faults) 07 May 2013, 04:53:43 UTC
210aa9f remove redundant message in cheetah_ana_mod 07 May 2013, 03:41:14 UTC
f2c5864 Add peak separation filter to algorithm 3 07 May 2013, 01:43:50 UTC
01a6d9d small fixup 07 May 2013, 01:17:03 UTC
7c57490 Merge branch 'developer' of https://github.com/antonbarty/cheetah into developer 07 May 2013, 00:30:12 UTC
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