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https://github.com/ENCODE-DCC/encoded
17 March 2024, 18:08:03 UTC
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Revision Author Date Message Commit Date
b1165f1 Keenan Graham 17 August 2018, 19:15:15 UTC Add force all 17 August 2018, 19:15:15 UTC
3211c2a Keenan Graham 17 August 2018, 18:54:54 UTC Try ES 5.6.9 manual install 17 August 2018, 18:54:54 UTC
2a5dee6 caseylitton 17 August 2018, 05:13:35 UTC remove yamls upgrade 17 August 2018, 05:13:35 UTC
e5aaa96 Casey Litton 13 August 2018, 23:45:23 UTC Update to version 74.0 (#2369) 13 August 2018, 23:45:23 UTC
0d913d2 Casey Litton 10 August 2018, 20:11:58 UTC ENCD-4169 Update to snovault 1.0.15 (#2368) 10 August 2018, 20:11:58 UTC
1717857 keenangraham 10 August 2018, 19:24:41 UTC [2nd] ENCD-4131-set-status-endpoint (#2363) 10 August 2018, 19:24:41 UTC
af059d4 keenangraham 08 August 2018, 16:21:53 UTC ENCD-4168-add-embed-cache-to-ini (#2367) 08 August 2018, 16:21:53 UTC
ffe595e Casey Litton 08 August 2018, 16:05:33 UTC [2nd] ENCD-4136 Fix dry aws run print (#2364) 08 August 2018, 16:05:33 UTC
5e2ba52 Casey Litton 06 August 2018, 20:21:46 UTC ENCD-4167 Explicitly set availability zone in deploy script (#2361) 06 August 2018, 20:21:46 UTC
2503a18 Casey Litton 05 August 2018, 15:45:51 UTC ENCD-4163 Update to snovault 1.0.14 (#2360) 05 August 2018, 15:45:51 UTC
ed8f45d Yunhai Luo 05 August 2018, 15:38:55 UTC ENCD-3997 Create Gene object (#2307) 05 August 2018, 15:38:55 UTC
6cb1138 keenangraham 05 August 2018, 15:37:55 UTC ENCD-4131-set-status-endpoint (#2353) 05 August 2018, 15:37:55 UTC
2b88852 Casey Litton 03 August 2018, 22:01:59 UTC ENCD-4083 Allow aws s3 to s3 file transfer (#2358) 03 August 2018, 22:01:59 UTC
f90b499 Casey Litton 03 August 2018, 16:38:38 UTC ENCD-4162 update snovault 1.0.13 (#2359) 03 August 2018, 16:38:38 UTC
e67df1e Casey Litton 03 August 2018, 16:22:21 UTC ENCD-4136 Add dry run arg for deployment (#2357) 03 August 2018, 16:22:21 UTC
0fca4e5 Idan Gabdank 03 August 2018, 15:46:08 UTC ENCD-4123 audit chip (#2343) 03 August 2018, 15:46:08 UTC
cea642d Casey Litton 03 August 2018, 15:41:21 UTC ENCD-4154 Remove unused search type arg (#2355) 03 August 2018, 15:41:21 UTC
770e512 jahilton 02 August 2018, 16:46:49 UTC ENCD-4141 Add alias namespaces (#2344) 02 August 2018, 16:46:49 UTC
47fe186 estherc 02 August 2018, 16:45:48 UTC ENCD-4152 Make organism scientific_name required (#2354) 02 August 2018, 16:45:48 UTC
c8ebee7 weiweizhong2018 02 August 2018, 16:42:43 UTC ENCD-4107 Added experiment_class to experiment schema (#2330) 02 August 2018, 16:42:43 UTC
373833c weiweizhong2018 01 August 2018, 22:34:17 UTC ENCD-4134 add RIN number property to Library (#2348) 01 August 2018, 22:34:17 UTC
36939c1 Phil 01 August 2018, 22:19:58 UTC ENCD-3732-replicate-sorting (#2329) 01 August 2018, 22:19:58 UTC
8277130 Forrest Tanaka 01 August 2018, 21:43:21 UTC ENCD-4146 Restore FileDownloadButton constructor (#2352) 01 August 2018, 21:43:21 UTC
40bc8cb Casey Litton 01 August 2018, 00:35:40 UTC ENCD-4149 Allow bin test log arg for workbook loading (#2351) 01 August 2018, 00:35:40 UTC
e02d30a Phil 30 July 2018, 17:35:58 UTC ENCD-4144 Fix failing impersonation test button size (#2350) 30 July 2018, 17:35:58 UTC
9735ee7 weiweizhong2018 30 July 2018, 17:27:21 UTC ENCD-4118 set minimum value to 0 for ch coordinates in GM (#2347) 30 July 2018, 17:27:21 UTC
a8e274d keenangraham 30 July 2018, 17:18:54 UTC ENCD-4143 Add asserts to status trigger tests 30 July 2018, 17:18:54 UTC
163cb0a Casey Litton 20 July 2018, 21:06:42 UTC Update to version 73.0 (#2342) 20 July 2018, 21:06:42 UTC
f668be6 Idan Gabdank 19 July 2018, 01:51:40 UTC [2nd] ENCD-4108 Missing return after yield (#2339) 19 July 2018, 01:51:40 UTC
0dfdf2b Casey Litton 17 July 2018, 00:31:55 UTC Revert "ENCD-4083-add-ext-user-get-to-enc-policy (#2301)" (#2337) 17 July 2018, 00:31:55 UTC
1a4ca60 Casey Litton 13 July 2018, 21:44:23 UTC ENCD-4129-update-to-snovault-1.0.12 (#2336) 13 July 2018, 21:44:23 UTC
e3630dc keenangraham 13 July 2018, 21:28:29 UTC ENCD-4064-release-endpoint (#2281) 13 July 2018, 21:28:29 UTC
9171132 Casey Litton 13 July 2018, 21:25:50 UTC ENCD-4083-add-ext-user-get-to-enc-policy (#2301) 13 July 2018, 21:25:50 UTC
c5023da Forrest Tanaka 13 July 2018, 15:13:58 UTC ENCD-4017 Fulfill ECP requests for home page additions. (#2326) 13 July 2018, 15:13:58 UTC
a8de7a5 Forrest Tanaka 12 July 2018, 17:26:01 UTC ENCD-4105 Add DGGR dbxref processing (#2325) 12 July 2018, 17:26:01 UTC
6b7da9b Idan Gabdank 12 July 2018, 17:24:26 UTC ENCD-4108 audit matched (#2324) 12 July 2018, 17:24:26 UTC
bf1882d Phil 12 July 2018, 17:18:07 UTC ENCD-4089-Deactivated-rep-num-in-annot-table (#2315) 12 July 2018, 17:18:07 UTC
7e23f6f Phil 12 July 2018, 17:15:56 UTC ENCD-4074-toolip-overlay (#2313) 12 July 2018, 17:15:56 UTC
b457560 weiweizhong2018 12 July 2018, 16:37:46 UTC ENCD-4102 changed audit from WARNING to ERROR (#2327) 12 July 2018, 16:37:46 UTC
13a0e14 Forrest Tanaka 12 July 2018, 16:31:01 UTC ENCD-3903 add documentation for schema page (#2332) 12 July 2018, 16:31:01 UTC
a20b1b3 Idan Gabdank 11 July 2018, 18:15:46 UTC ENCD-3563 updated sc replication audit (#2322) 11 July 2018, 18:15:46 UTC
a9cdead Phil 11 July 2018, 18:05:05 UTC ENCD-4087-fixed-flybase-search (#2312) 11 July 2018, 18:05:05 UTC
2445f38 weiweizhong2018 11 July 2018, 18:04:23 UTC ENCD-4051-Change schemas to set minimum int values (#2309) 11 July 2018, 18:04:23 UTC
2a9df3b Casey Litton 29 June 2018, 03:52:12 UTC Update to version 72.0 (#2320) 29 June 2018, 03:52:12 UTC
55d8979 keenangraham 27 June 2018, 18:48:32 UTC ENCD-4103 Fix tests broken by SNO-41 (#2317) 27 June 2018, 18:48:32 UTC
f32df1f keenangraham 27 June 2018, 18:46:59 UTC ENCD-3776-move-to-standard-status-no-lab (#2316) 27 June 2018, 18:46:59 UTC
8ba435d Casey Litton 27 June 2018, 18:40:58 UTC Revert "ENCD-3776-move-to-standard-status (#2295)" (#2318) 27 June 2018, 18:40:58 UTC
eea4bf9 Casey Litton 24 June 2018, 18:10:11 UTC ENCD-4098 Update to snovault 1.0.11 (#2314) 24 June 2018, 18:10:11 UTC
3e3d70f Casey Litton 24 June 2018, 18:05:36 UTC ENCD-4072 Remove es master from deployment (#2302) 24 June 2018, 18:05:36 UTC
42eec9b weiweizhong2018 22 June 2018, 17:27:30 UTC ENCD-4086-Analysis-Step schema (#2305) 22 June 2018, 17:27:30 UTC
0ce5be2 Phil 22 June 2018, 17:26:36 UTC ENCD-4048-rep-num-in-pub-n-exp (#2311) 22 June 2018, 17:26:36 UTC
401ccaf tdreszer 22 June 2018, 15:56:45 UTC ENCD-4093 Fix initial region indexing failure (#2308) 22 June 2018, 15:56:45 UTC
a09a175 Forrest Tanaka 21 June 2018, 19:52:30 UTC ENCD-3728 Fix build error (#2306) 21 June 2018, 19:52:30 UTC
f545815 Idan Gabdank 21 June 2018, 19:47:54 UTC ENCD-4020 Allowing specification of Sets as controls (#2296) 21 June 2018, 19:47:54 UTC
ec2ebf1 Phil 21 June 2018, 16:37:26 UTC ENCD-4055-removed-some-styling-on-raw-data (#2277) 21 June 2018, 16:37:26 UTC
1a5f1c3 Phil 21 June 2018, 16:33:26 UTC ENCD-4057-properly-format-data-on-biosample-page (#2276) 21 June 2018, 16:33:26 UTC
13dc9f5 Phil 21 June 2018, 16:29:19 UTC ENCD-4088 Remove extra code added in ENCD-3306 (#2310) 21 June 2018, 16:29:19 UTC
d71d608 tdreszer 20 June 2018, 23:02:46 UTC ENCD-4040 vis index replicate conditional (#2294) 20 June 2018, 23:02:46 UTC
869dcb0 keenangraham 20 June 2018, 17:10:01 UTC ENCD-3718-return-404-when-file-not-found (#2278) 20 June 2018, 17:10:01 UTC
b398316 tdreszer 20 June 2018, 16:15:54 UTC ENCD-4073 Revert accidental blocked dataset status expansion (#2291) 20 June 2018, 16:15:54 UTC
6335e22 Casey Litton 18 June 2018, 18:54:39 UTC ENCD-4077 Fix deploy volume size type (#2304) 18 June 2018, 18:54:39 UTC
19ecb6b keenangraham 18 June 2018, 18:49:35 UTC ENCD-3776-move-to-standard-status (#2295) 18 June 2018, 18:49:35 UTC
be4fb9c keenangraham 18 June 2018, 18:47:47 UTC ENCD-4078 Remove unused statuses (#2293) 18 June 2018, 18:47:47 UTC
1ec1ba6 Phil 18 June 2018, 17:39:36 UTC ENCD-4058-expanding-matrix-creates-unaligned-header (#2280) 18 June 2018, 17:39:36 UTC
f43c50d weiweizhong2018 14 June 2018, 21:49:22 UTC ENCD-4085 Add weiwei as a submitter (#2298) 14 June 2018, 21:49:22 UTC
1c49168 Yunhai Luo 13 June 2018, 20:18:58 UTC ENCD-4081 Add Yunhai as a submitter in local test. (#2288) ENCD-4081 Add Yunhai as a submitter in local test. 13 June 2018, 20:18:58 UTC
f829d68 Casey Litton 12 June 2018, 16:30:18 UTC Update to version 71.0 (#2290) 12 June 2018, 16:30:18 UTC
ab3557a Casey Litton 12 June 2018, 16:07:21 UTC Revert both (#2283, #2248) ENCD-4020 commits 12 June 2018, 16:07:21 UTC
dd187c9 Casey Litton 07 June 2018, 17:27:48 UTC Revert "ENCD-4048-update-publication-data-raw-file-table (#2273)" (#2287) This reverts commit e52d2f9e358a196d6e3ffc8deacb026cc9ebc9dd. 07 June 2018, 17:27:48 UTC
3d3403c Idan Gabdank 07 June 2018, 16:47:02 UTC [2nd] ENCD-4020 Bug fix updating possible_controls in experiment (#2283) 07 June 2018, 16:47:01 UTC
0ff7aab Ben Hitz 01 June 2018, 22:55:03 UTC ENCD-4046 update to snovault 1.0.10, add CHANGES (#2275) 01 June 2018, 22:55:03 UTC
e52d2f9 Phil 01 June 2018, 22:39:08 UTC ENCD-4048-update-publication-data-raw-file-table (#2273) 01 June 2018, 22:39:08 UTC
9ef9413 Phil 01 June 2018, 19:59:35 UTC ENCD-3306-fix-line-in-table (#2271) 01 June 2018, 19:59:35 UTC
d139638 Forrest Tanaka 01 June 2018, 16:26:51 UTC ENCD-4045 gdpr auth0 (#2274) 01 June 2018, 16:26:51 UTC
73f51d2 keenangraham 01 June 2018, 02:31:25 UTC ENCD-3695-upgrade-to-boto3 (#2272) 01 June 2018, 02:31:25 UTC
a620b0e Phil 01 June 2018, 02:26:47 UTC ENCD-3883-add-pmi-data (#2263) 01 June 2018, 02:26:47 UTC
530f46b Idan Gabdank 01 June 2018, 02:25:19 UTC ENCD-4020 updating possible_controls in experiment (#2248) 01 June 2018, 02:25:19 UTC
9dccdff Phil 01 June 2018, 02:20:45 UTC ENCD-3727 added hypen for long words (#2270) 01 June 2018, 02:20:45 UTC
86ec134 Phil 31 May 2018, 23:00:37 UTC added myself as a test user. This has no effect on prod (#2269) 31 May 2018, 23:00:37 UTC
0df188d Idan Gabdank 31 May 2018, 22:58:14 UTC ENCD-4019 adding readname_details field to the file.json (#2260) * adding fastq property of readname details * updating the changelog * adding file schema test for the new readname_details property dependency * fixing according to Jason's comments * fix of the file schema test 31 May 2018, 22:58:14 UTC
bd6cf3c Idan Gabdank 31 May 2018, 22:43:49 UTC ENCD-4042 Update genetic mods for functional characterization experiments (#2262) * adding screening and changing validation into characterization * added schema version update * added upgrade test * removing trailing white spaces * fixing the changelog message 31 May 2018, 22:43:48 UTC
4ea4a09 Forrest Tanaka 31 May 2018, 22:30:31 UTC ENCD-4045 Add privacy link to footer (#2267) 31 May 2018, 22:30:31 UTC
e55a52c Forrest Tanaka 31 May 2018, 22:29:27 UTC ENCD-3629 Refactor and redesign status displays. (#2246) * ENCD-3629 Refactor amd redesign status displays. * Changed “size” to “badgeSize” Changed the “size” property name for <Status> to “badgeSize” based on code review comment. 31 May 2018, 22:29:26 UTC
226ccef Phil 29 May 2018, 22:45:01 UTC ENCD-4034 SVG tooltip and minor JS clean up (#2255) 29 May 2018, 22:45:01 UTC
9c26585 Phil 29 May 2018, 22:44:27 UTC ENCD-3911 Added a break above document box (#2256) 29 May 2018, 22:44:27 UTC
fe038e5 Phil 29 May 2018, 22:43:49 UTC ENCD-3364 fixed text and link button misalignment (#2257) 29 May 2018, 22:43:49 UTC
65f73f4 Casey Litton 29 May 2018, 20:17:36 UTC Merge pull request #2266 from ENCODE-DCC/master v70.0 (and v69.0) Merge pull request #2265 from ENCODE-DCC/release-v70.0 29 May 2018, 20:17:36 UTC
09f0825 Casey Litton 29 May 2018, 20:14:59 UTC Merge pull request #2265 from ENCODE-DCC/release-v70.0 Release v70.0 (and v69.0) 29 May 2018, 20:14:59 UTC
25cc145 Casey Litton 22 May 2018, 20:42:03 UTC Update to version 70.0 (#2259) 22 May 2018, 20:42:03 UTC
6c1e717 Casey Litton 22 May 2018, 20:28:23 UTC ENCD-4037 Update snovault 1.0.9 (#2258) 22 May 2018, 20:28:23 UTC
0a09971 Casey Litton 11 May 2018, 21:13:13 UTC ENCD-4029 Update to snovault 1.0.8 (#2254) 11 May 2018, 21:13:13 UTC
5991487 jahilton 11 May 2018, 15:56:34 UTC ENCD-3889 supersedes refepi (#2247) 11 May 2018, 15:56:34 UTC
ab5124c keenangraham 10 May 2018, 22:18:48 UTC ENCD-3871-target-standard-status (#2252) 10 May 2018, 22:18:48 UTC
a00cb74 Casey Litton 10 May 2018, 22:07:52 UTC ENCD-4011 Fix wrong vars in buildout candidate config file (#2241) 10 May 2018, 22:07:52 UTC
bc5dfdd Forrest Tanaka 10 May 2018, 22:06:55 UTC ENCD-3867 Display proper replicate_type string (#2249) 10 May 2018, 22:06:55 UTC
ab62a1c Idan Gabdank 10 May 2018, 19:28:40 UTC ENCD-4015 adding an audit for read_count and test for it (#2242) 10 May 2018, 19:28:40 UTC
47cb5e0 Idan Gabdank 10 May 2018, 15:52:58 UTC ENCD-4010 fixing a typo in the samtools flagstat quality metric (#2238) 10 May 2018, 15:52:58 UTC
8f1381f Idan Gabdank 10 May 2018, 15:50:52 UTC ENCD-3995 Update file output_type (#2239) 10 May 2018, 15:50:52 UTC
cbe6be7 Idan Gabdank 10 May 2018, 15:33:28 UTC ENCD-4016 adding community to users (#2243) 10 May 2018, 15:33:28 UTC
a3d471b Forrest Tanaka 10 May 2018, 15:27:15 UTC ENCD-3957 Add biosample accession to report columns (#2250) 10 May 2018, 15:27:15 UTC
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