https://github.com/broadinstitute/BARD

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Revision Author Date Message Commit Date
d648ad0 moved these views to a directory with a lower case - this work fine in run-app but fail when deployed as a war with the original upper case AddItemWizard dir. 17 December 2012, 20:26:00 UTC
f88bc3f Grammar tweaks 19 November 2012, 16:58:52 UTC
1b5e512 remove old unused projects: bardqueryapi, elasticSearchPlugin, xmltojson 15 November 2012, 16:01:35 UTC
cdcd08f repair broken application.properties file by reverting 13 November 2012, 18:07:58 UTC
c9c0e99 finish processing the four Burnham spreadsheets 13 November 2012, 17:19:47 UTC
d9ff5ce cleaning up some more spreadsheets 13 November 2012, 16:48:40 UTC
b9f3f38 Merge branch 'master' of github.com:broadinstitute/BARD 06 November 2012, 21:17:37 UTC
fbd6cd0 Finish parsing all the Broad assay successfully 06 November 2012, 21:17:21 UTC
b58d1d0 received spreadsheet updates from Josh 06 November 2012, 11:43:31 UTC
30faf41 modify find link so that text says editing and cloning 05 November 2012, 22:26:51 UTC
ecc18a2 added back application.properties with svn dependency 05 November 2012, 16:48:59 UTC
38f7c62 updated BuildConfig to fall back to grailsCentral() - TODO, need to look at the code for resolving grailsCentral and update the artifactory config - grails-webflow didn't resolve properly when only hitting artifactory but did resolve properly with the grailsCentral() fallback 05 November 2012, 16:37:29 UTC
3c5dd89 WIP. Added Add Item Wizard for cards in Assay edit mode. Functionality is a work in progress 02 November 2012, 19:18:29 UTC
21e7e70 WIP. Added Add Item Wizard for cards in Assay edit mode. Functionality is a work in progress 02 November 2012, 19:01:24 UTC
b868106 adding support for ranges on numeric-value fields; cleaning up the spreadsheets 02 November 2012, 18:51:29 UTC
d541dbb switching to work on the new spreadsheet set from Josh 31 October 2012, 19:32:49 UTC
f947a1b Merge branch 'master' of github.com:broadinstitute/BARD 30 October 2012, 13:04:03 UTC
d2b6d2f adding the new spreadsheets from Josh - Broad assays 30 October 2012, 13:03:45 UTC
c2a5ef4 wip 29 October 2012, 20:45:39 UTC
5962a5b fix application.properties that I broke 26 October 2012, 17:41:29 UTC
9ef3a85 Merge branch 'master' of github.com:broadinstitute/BARD Conflicts: BARD/application.properties 26 October 2012, 17:33:51 UTC
a69fe29 added back reference to svn to fix build TODO: track done this dependency and eliminate it 25 October 2012, 19:39:15 UTC
c645c90 add back application.properties file - had to run grails upgrade again and it added this file 25 October 2012, 19:34:59 UTC
ca51deb adding back application.properties file 25 October 2012, 19:24:18 UTC
25b63af changed code for fixtures to dynamically name beans and use a for loop 25 October 2012, 19:06:49 UTC
3a59637 cleaned up some the the data setup 25 October 2012, 19:06:49 UTC
773c383 WIP 25 October 2012, 18:01:06 UTC
9f8741f New changes: Create View Assay Definition page. On view assay definition page change assay to assay definition, put ADID in title. Add edit button to View Assay Definition page. Change title of Edit page, add ADID to title, shorten title of 1st collapsible panel. Add save and cancel buttons to Edit Assay page. Add Add Item Wizard button to each card in Edit Assay Definition page. 25 October 2012, 16:27:00 UTC
b471dc7 adding another test-case to AssayServiceIntegrationSpec 25 October 2012, 14:25:22 UTC
f0ab7b3 Merge branch 'master' of github.com:broadinstitute/BARD into assayService_with_fixture 25 October 2012, 14:03:42 UTC
e484276 adding Fixture to the AssayServiceIntegrationSpec test 25 October 2012, 14:03:23 UTC
a8532d4 fix indent in CbipCrowd section of Config.groovy 24 October 2012, 19:53:56 UTC
745357c upgrade to grails 2.11 24 October 2012, 18:07:45 UTC
ef2b901 Merge branch 'master' of github.com:broadinstitute/BARD 24 October 2012, 17:25:30 UTC
fc653a8 re-upgrading to grails 2.1.1 24 October 2012, 17:25:12 UTC
5c9e51b Fixing the association problem between ExternalReference and Experiment 24 October 2012, 16:43:24 UTC
1fc5038 Merge branch 'master' of https://github.com/broadinstitute/BARD 23 October 2012, 16:51:20 UTC
68909f8 change to display field in select card 23 October 2012, 16:46:28 UTC
279bcba merging from master 23 October 2012, 16:09:50 UTC
f4d708d Ran all minAssayAnnotationSpreadsheets spreadsheets successfully 23 October 2012, 16:07:37 UTC
a3c7e4c updating the script 23 October 2012, 15:04:48 UTC
a1b3d61 Modified the repository config to not inherit repositories from plugins We want all artifacts cached in our artifactory server, if a plugin needs an artifact from a repo we currently do not proxy we should update our artifactory instance and add the proxy and work it into the resolution order in the right place. Along with these changes, I also tweaked the config of artifactory to try and eleminate situations were remote repos were timing out. 22 October 2012, 21:02:11 UTC
a1dd826 fixed bug in move card (no dnd) 22 October 2012, 15:54:24 UTC
758fd83 fixed conflicts. Up to date with grails 2.1.1 22 October 2012, 13:30:02 UTC
8d10407 Make some changes to card view such as menus for operations on cards and items. Also added alternative approach to using drag-drop between the cards 22 October 2012, 12:51:34 UTC
728a796 Merge branch 'master' of github.com:broadinstitute/BARD 19 October 2012, 14:38:50 UTC
6e3c7ae adding new mapping from Simon and receiving two new versions from Josh 19 October 2012, 13:42:15 UTC
5f5b1e4 PT37183767 PT37183741 Setting up Geb for CAP including Firefox and Chrome support 18 October 2012, 18:21:03 UTC
4c73668 Merge branch 'branch-for-grailsupgrade' 17 October 2012, 00:27:26 UTC
51690eb Fixing all broken tests 17 October 2012, 00:19:19 UTC
02f517b Merge branch 'branch-for-grailsupgrade' 16 October 2012, 18:33:09 UTC
e801a16 Upgrading CAP to grails 2.1.1 16 October 2012, 18:32:30 UTC
873582a grails 2.1.1 16 October 2012, 16:24:53 UTC
6b69db5 UPdating DataExport to use Grails 2.1.1 16 October 2012, 16:23:50 UTC
fead39e Upgrade t0 2.1.1 16 October 2012, 16:07:50 UTC
2fb15f9 Merge branch 'branch-for-grailsupgrade' 16 October 2012, 16:07:26 UTC
0a5b0e0 updating Domain model to grails.2.1.2=1 16 October 2012, 16:04:59 UTC
84c91ae PT37714231 Adding support for Clover 16 October 2012, 13:44:09 UTC
fb7b88c initial version - tested for a adid not null; assayContext not null; including multiple modified items 11 October 2012, 16:50:11 UTC
5d68a05 still in progress 10 October 2012, 20:31:29 UTC
4967020 still in progress 10 October 2012, 20:30:57 UTC
27622ce Removing a file 09 October 2012, 18:51:57 UTC
0ae718b Adding reader wavelength concentration units 05 October 2012, 09:24:19 UTC
b1666f1 Merge branch 'master' of https://github.com/broadinstitute/BARD 03 October 2012, 19:54:25 UTC
65beb99 wip 03 October 2012, 19:53:59 UTC
1e2bc7b css tweak to scroll tables within cards if it would otherwise overflow 03 October 2012, 18:36:57 UTC
15c9b59 Merging in card css tweaks Merge branch 'iteration.010' 03 October 2012, 13:19:21 UTC
0ca6ca2 tweaks for css and card layout - switched to 2 cards per row - updated remove item and card to use icons - got the drophover for the card working 03 October 2012, 03:00:40 UTC
9828389 Merge branch 'iteration.010' 02 October 2012, 20:04:22 UTC
2c03efa forgot to update integration test with modified constraint for AssayContext.contextName 02 October 2012, 20:03:12 UTC
ec1010f fixes for drag and drop as well as editing card titles Merge branch 'iteration.010' Conflicts: BARD/grails-app/views/layouts/basic.gsp 02 October 2012, 18:55:08 UTC
b9a1f31 Added ability to highlight rows in card - https://www.pivotaltracker.com/projects/506277#!/stories/37030321 - change from the tr / row being draggable to the td for the attribute label being draggable - this has the side effect of making the attribute value selecetable 02 October 2012, 18:48:56 UTC
569e5ef addtional work for allowing user to specified names for cards -- https://www.pivotaltracker.com/projects/506277#!/stories/37030787 - added double click to card titles and reworked the add card form to also work for edit card, added new controller and service methods 02 October 2012, 18:26:03 UTC
e107139 partial fix for Added some logic to allow display user specified names for cards https://www.pivotaltracker.com/projects/506277#!/stories/37030787 - added some logic to display user set cardname 02 October 2012, 18:26:03 UTC
cf19ffc PT37025201 Fixing link for BARD Web Query Home to take user to the home page for the Web Query UI 02 October 2012, 17:32:58 UTC
444e012 PT37025201 Fixing link for BARD Web Query Home to take user to the home page for the Web Query UI 02 October 2012, 17:26:37 UTC
f1beac9 added code to eliminate nulls if no preferred descriptor can be found for an element 02 October 2012, 03:56:50 UTC
97f4845 added some additional logic for picking sections for card grouping there was at least one assay 3989 that had a card with and item that resulted in descriptor path with a length less than 2. So added some logic to take the min of path.size() or 2 02 October 2012, 02:36:51 UTC
91f87d8 Added fix to CardService for sublist and styling for panel assay also adjusted the load-data routine to load all assay with no results 02 October 2012, 01:44:04 UTC
52d45c8 fix for PT506277, lookup ADID 3564 in CAP causes exception https://www.pivotaltracker.com/projects/506277 update gsp to agree with changes that occurred in domain model 02 October 2012, 00:11:44 UTC
d1f2cba teaked the headings a bit to make them smaller 01 October 2012, 20:51:46 UTC
9154fbd moved logging.properties to src/groovy 01 October 2012, 20:27:34 UTC
78cf9ee had file in wrong dir, moved it to WEB-INF/classes 01 October 2012, 20:14:38 UTC
b82ff8a adding this logging file back it must have been deleted 01 October 2012, 19:51:15 UTC
0a7ba95 fixes for broken tests 01 October 2012, 18:05:51 UTC
351c6ac some tweaks to the css to add background color to card sections 01 October 2012, 16:47:46 UTC
7679e81 removed alert displaying card primary key before delete 01 October 2012, 14:18:28 UTC
f2cf7ef Merge branch 'master' of https://github.com/broadinstitute/BARD 28 September 2012, 19:58:44 UTC
c83dbbf Fix delete empty card that got broken when sections where added to cards in assay view. Fix basic assay registration form. 28 September 2012, 19:55:14 UTC
11251cd added an initial sort on assayContext.id to make card order slightly more stable 28 September 2012, 18:16:12 UTC
bbdf338 changed log message level to error when missing attribute found 28 September 2012, 16:26:05 UTC
a6429b1 Merge branch 'master' of github.com:broadinstitute/BARD Conflicts: DnaRepairSpreadsheetParser/scripts/ParseSpreadsheet.groovy 28 September 2012, 15:31:51 UTC
e0c8637 add recording of times to log file 28 September 2012, 15:25:55 UTC
019f029 adding a column header 'assay component role' for all the spreadsheet for cell 2/G 28 September 2012, 15:22:02 UTC
5fcf517 Merge branch 'master' of https://github.com/broadinstitute/BARD 28 September 2012, 14:22:56 UTC
629dbcb WIP 28 September 2012, 14:20:15 UTC
8b75a07 cleaning up the spreadsheets a little to try and help the parsing process 28 September 2012, 06:03:40 UTC
786aa4d do not save attributes with empty key/value values 28 September 2012, 04:36:10 UTC
5061441 Merge branch 'master' of github.com:broadinstitute/BARD 28 September 2012, 03:02:22 UTC
6298226 Concatenating concentration-units abbreviation to displayValue if the value is a concentration 28 September 2012, 03:01:27 UTC
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