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https://github.com/clulab/reach
17 August 2024, 19:10:42 UTC
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Revision Author Date Message Commit Date
50659d0 Mihai Surdeanu 16 November 2018, 23:05:43 UTC New script 16 November 2018, 23:05:43 UTC
1be16f3 Mihai Surdeanu 16 November 2018, 20:53:27 UTC full conf file 16 November 2018, 20:53:27 UTC
e83d86a Mihai Surdeanu 16 November 2018, 20:33:19 UTC Search for phosphos 16 November 2018, 20:33:19 UTC
375d5c3 Enrique Noriega 09 November 2018, 23:57:51 UTC Marked as ignored the tests that aren't been worked on yet to avoid reporting them as incorrect 09 November 2018, 23:57:51 UTC
fa27f76 Enrique Noriega 19 October 2018, 19:24:53 UTC Merge pull request #598 from clulab/polarity Polarity 19 October 2018, 19:24:53 UTC
a8c3310 Enrique Noriega 18 October 2018, 20:42:40 UTC Accomodated some changes for the pull request 18 October 2018, 20:42:40 UTC
5855416 Enrique Noriega 16 October 2018, 22:44:43 UTC Changed the config to use the built-in processors instead of the server 16 October 2018, 22:44:43 UTC
de9cc18 Enrique Noriega 16 October 2018, 19:41:47 UTC Removed some log info statements 16 October 2018, 19:41:47 UTC
abbf1a1 Enrique Noriega 09 October 2018, 18:51:58 UTC Merge pull request #597 from clulab/dups distinct mentions 09 October 2018, 18:51:58 UTC
c98c339 Enrique Noriega 09 October 2018, 18:51:08 UTC Merge pull request #596 from clulab/escape escape html chars 09 October 2018, 18:51:08 UTC
9a7888e Marco Antonio Valenzuela Escárcega 09 October 2018, 00:21:56 UTC distinct mentions 09 October 2018, 00:21:56 UTC
0f0d891 Marco Antonio Valenzuela Escárcega 09 October 2018, 00:03:12 UTC escape 09 October 2018, 00:03:12 UTC
3d687eb Enrique Noriega 01 October 2018, 23:12:49 UTC Merge pull request #594 from clulab/desc shell output in webapp 01 October 2018, 23:12:49 UTC
96f4581 Marco Antonio Valenzuela Escárcega 29 September 2018, 05:39:08 UTC shell mentions 29 September 2018, 05:39:08 UTC
b207983 Enrique Noriega 26 September 2018, 21:20:56 UTC Merge pull request #593 from clulab/rels RelationMentions in webapp 26 September 2018, 21:20:56 UTC
540b3f5 Marco Antonio Valenzuela Escárcega 26 September 2018, 05:53:03 UTC getArg 26 September 2018, 05:53:03 UTC
e173ecc Marco Antonio Valenzuela Escárcega 26 September 2018, 05:30:36 UTC rename 26 September 2018, 05:30:36 UTC
683f1cf Marco Antonio Valenzuela Escárcega 26 September 2018, 05:19:20 UTC relations 26 September 2018, 05:19:20 UTC
fa7728a Enrique Noriega 10 September 2018, 22:31:20 UTC Reduced code duplication by introducing beahviors and added significantly more tests 10 September 2018, 22:31:20 UTC
077ac5a Enrique Noriega 07 September 2018, 22:15:46 UTC Tagged the ignored tests at the right place 07 September 2018, 22:15:46 UTC
bb38c07 Enrique Noriega 07 September 2018, 22:14:56 UTC Fixed a bug that caused sen17 to fail and marked sen16 as ignore for now 07 September 2018, 22:15:31 UTC
64e017f Enrique Noriega 07 September 2018, 18:07:29 UTC Removed again target from the negative lexicon 07 September 2018, 18:07:29 UTC
c1baf6d Enrique Noriega 07 September 2018, 05:16:00 UTC Restored target into the negative lexicon 07 September 2018, 05:16:00 UTC
7352a4b Enrique Noriega 07 September 2018, 04:06:13 UTC Fixed a test that had a bug 07 September 2018, 04:06:13 UTC
debb495 Enrique Noriega 07 September 2018, 00:34:10 UTC Removed the webapp tests and implemented the feature to ignore prepc_by dependencies for the controlled argument 07 September 2018, 00:34:10 UTC
7e9e69d Enrique Noriega 04 September 2018, 21:26:21 UTC Added the initial implementation of particle modifiers 04 September 2018, 21:26:21 UTC
a965660 Enrique Noriega 04 September 2018, 20:17:24 UTC Fixed another test with case insensitivity 04 September 2018, 20:17:24 UTC
730575e Enrique Noriega 03 September 2018, 22:47:08 UTC More progress on negation analysis and fixing 03 September 2018, 22:47:08 UTC
6283ce0 Enrique Noriega 03 September 2018, 21:55:10 UTC Progress on fixing negation analysis 03 September 2018, 21:55:10 UTC
d262da6 Enrique Noriega 31 August 2018, 19:48:23 UTC Merge branch 'master' into polarity 31 August 2018, 19:48:23 UTC
0e2819b Enrique Noriega 30 August 2018, 18:05:38 UTC Merge pull request #588 from clulab/webapp Webapp 30 August 2018, 18:05:38 UTC
385eb00 Enrique Noriega 30 August 2018, 17:11:22 UTC Removed theh scafolding hidden directory from the version 30 August 2018, 17:11:22 UTC
e754e4f Enrique Noriega 29 August 2018, 19:08:51 UTC The visualizer now works with REACH mentions. All eidos branding has been removed 29 August 2018, 19:08:51 UTC
814203f Enrique Noriega 28 August 2018, 22:09:55 UTC Fixed build.sbt to make the webapp run 28 August 2018, 22:09:55 UTC
157081d Enrique Noriega 28 August 2018, 21:31:59 UTC Now compiles, but still doesn't run 28 August 2018, 21:31:59 UTC
0a79df4 Enrique Noriega 28 August 2018, 19:55:10 UTC Started the port of Eidos' webapp into reach. The code for the webapp subproject doesn't compile yet 28 August 2018, 19:55:10 UTC
ab06567 Enrique Noriega 28 August 2018, 05:14:37 UTC Some of the tests for polarity 28 August 2018, 05:14:37 UTC
63d4e39 Enrique Noriega 25 August 2018, 00:47:38 UTC Initial tests out of Ben's analysis 25 August 2018, 00:47:38 UTC
afff677 Mihai Surdeanu 30 May 2018, 16:31:24 UTC Merge pull request #582 from clulab/turnover Added "turnover" as a semantic polarity keyword 30 May 2018, 16:31:24 UTC
779942c Mihai Surdeanu 30 May 2018, 15:56:05 UTC Added "turnover" as a semantic polarity keyword 30 May 2018, 15:56:05 UTC
5b9166f Mihai Surdeanu 09 May 2018, 22:07:24 UTC Merge pull request #581 from clulab/noserver Switched default processor to BioNLPProcessor rather than the server.… 09 May 2018, 22:07:24 UTC
b5bcaa1 Mihai Surdeanu 09 May 2018, 22:04:54 UTC Switched default processor to BioNLPProcessor rather than the server. The client/server config remains available. 09 May 2018, 22:04:54 UTC
25f125f Mihai Surdeanu 26 March 2018, 13:23:03 UTC Update README.md 26 March 2018, 13:23:03 UTC
5206ee4 Mihai Surdeanu 26 February 2018, 22:24:59 UTC A couple more use cases. 26 February 2018, 22:24:59 UTC
973514a Mihai Surdeanu 12 February 2018, 17:43:13 UTC Merge pull request #577 from clulab/kwalcock-infiniteloop Handle loops which are produced by BioCluProcessor 12 February 2018, 17:43:13 UTC
10589d9 Keith Alcock 11 February 2018, 20:46:26 UTC First cut Second cut Third cut 11 February 2018, 20:46:26 UTC
d9c111a Mihai Surdeanu 07 February 2018, 15:59:42 UTC Merge pull request #575 from clulab/kwalcock-windows Find home from Java rather than environment 07 February 2018, 15:59:42 UTC
fa8c19a Keith Alcock 07 February 2018, 07:58:21 UTC Find home from Java rather than environment ConfigFactory fails for environments that don't have ${HOME} defined (e.g., Windows). Use ${user.home} instead. 07 February 2018, 07:58:21 UTC
d99ac0b Mihai Surdeanu 05 February 2018, 03:50:54 UTC Merge pull request #574 from clulab/kwalcock-windows Make this work for Windows by fixing path construction 05 February 2018, 03:50:54 UTC
1ce8d65 Keith Alcock 05 February 2018, 02:27:27 UTC Fix typo in comment 05 February 2018, 02:27:27 UTC
2949e3b Keith Alcock 05 February 2018, 00:15:13 UTC Account for paths in Windows by not doing it 05 February 2018, 00:15:13 UTC
d90d0a4 Tom Hicks 15 December 2017, 21:58:43 UTC Update Scala version to 2.11.11 to match Processors.reach branch. Update CHANGES file. 15 December 2017, 21:59:57 UTC
8b281f5 Tom Hicks 07 December 2017, 21:05:02 UTC Merge pull request #572 from clulab/p360 Update to use released Processors 6.3.0 as new Reach base. 07 December 2017, 21:05:02 UTC
05e6b18 Tom Hicks 07 December 2017, 20:26:56 UTC Update to use released Processors 6.3.0 as new Reach base. 07 December 2017, 20:26:56 UTC
e9657e0 Tom Hicks 27 November 2017, 22:32:48 UTC Update README and CHANGES files. 27 November 2017, 22:32:48 UTC
0fd1152 Mihai Surdeanu 27 November 2017, 21:19:26 UTC Merge pull request #568 from clulab/maxNxmlSize Only save nxml docs if no larger than maxSize (default 1MB) 27 November 2017, 21:19:26 UTC
cbc5e66 Dane Bell 27 November 2017, 17:00:14 UTC 1MB is 1E6 not 1E9 27 November 2017, 17:00:14 UTC
576d83e Dane Bell 27 November 2017, 16:56:19 UTC Only save nxml docs if no larger than 1MB 27 November 2017, 16:56:19 UTC
06dcb07 Mihai Surdeanu 26 November 2017, 03:13:39 UTC Merge branch 'master' of https://github.com/clulab/reach 26 November 2017, 03:13:39 UTC
3519218 Mihai Surdeanu 26 November 2017, 03:13:22 UTC Added option to save maxDocs documents 26 November 2017, 03:13:22 UTC
7192741 Tom Hicks 24 November 2017, 23:59:10 UTC Merge pull request #566 from clulab/libupdts Coordinate & update library versions across subprojects. 24 November 2017, 23:59:10 UTC
ad16ec6 Tom Hicks 24 November 2017, 21:56:42 UTC Coordinate & update library versions across subprojects. 24 November 2017, 21:56:42 UTC
255a5e6 Tom Hicks 22 November 2017, 20:15:05 UTC Merge pull request #565 from clulab/txt Fix file input pattern to include "txt". 22 November 2017, 20:15:05 UTC
13475e6 Tom Hicks 22 November 2017, 19:22:32 UTC Fix file input pattern to include "txt". 22 November 2017, 19:22:32 UTC
aaf7451 Tom Hicks 16 November 2017, 03:50:32 UTC Setting version to 1.4.1-SNAPSHOT 16 November 2017, 03:50:32 UTC
3b92c61 Tom Hicks 16 November 2017, 03:50:31 UTC Setting version to 1.4.0 16 November 2017, 03:50:31 UTC
ce80e0e Tom Hicks 16 November 2017, 03:33:42 UTC Merge pull request #561 from clulab/comv Test PR: changing Travis to run script 16 November 2017, 03:33:42 UTC
2e5385f marcovzla 16 November 2017, 03:14:43 UTC Update README.md 16 November 2017, 03:14:43 UTC
2f9b3e8 Tom Hicks 16 November 2017, 02:39:38 UTC Update Reach to use Processors 6.1.5 release. Update CHANGES file. 16 November 2017, 02:39:38 UTC
3f99d68 Tom Hicks 15 November 2017, 16:54:10 UTC Specify path to script. 15 November 2017, 16:54:10 UTC
4c267d1 Tom Hicks 15 November 2017, 16:33:22 UTC Attempt to switch what Travis runs for the tests on checkin. 15 November 2017, 16:33:22 UTC
7cdfa24 Tom Hicks 15 November 2017, 02:44:07 UTC Update tests for processing annotators. 15 November 2017, 02:44:07 UTC
20df562 Tom Hicks 15 November 2017, 02:43:46 UTC Refactor: change processor client to processor annotator. 15 November 2017, 02:43:46 UTC
853d71c Tom Hicks 15 November 2017, 02:41:15 UTC Add processor annotator selection, update/reorganize application.conf. 15 November 2017, 02:41:15 UTC
13efb7c Tom Hicks 13 November 2017, 22:01:37 UTC Update scripts to use remote server shutdown app to cleanup. 13 November 2017, 22:01:37 UTC
7d43d52 Tom Hicks 13 November 2017, 18:40:29 UTC Update for refactoring of shutdown methods. 13 November 2017, 18:40:29 UTC
ad10569 Tom Hicks 11 November 2017, 08:33:00 UTC Update test for serialization changes. 11 November 2017, 08:33:00 UTC
fa31f73 Tom Hicks 11 November 2017, 07:27:58 UTC Shutdown the client and server when finished. New shells for running top-level apps. Shutdown pass-through in paper reader. Update for reach system rename in paper reader. Other cleanups. 11 November 2017, 07:27:58 UTC
ea69142 Tom Hicks 10 November 2017, 01:58:20 UTC Update scala logging to match Processors. 10 November 2017, 01:58:20 UTC
9c8966e Mihai Surdeanu 08 November 2017, 20:58:40 UTC Added UA license 08 November 2017, 20:58:40 UTC
54b8449 Tom Hicks 01 November 2017, 01:28:50 UTC Update for client/server package/class renames. 01 November 2017, 01:28:50 UTC
7d08a91 Tom Hicks 01 November 2017, 01:22:43 UTC Update semi-qualified refs to scala.io.Source causing new errors. 01 November 2017, 01:22:43 UTC
9c15a41 Tom Hicks 18 October 2017, 21:01:11 UTC Merge latest 'master' into comv. 18 October 2017, 21:01:11 UTC
1b468fe Tom Hicks 18 October 2017, 20:58:25 UTC Merge pull request #558 from clulab/iss554 Issue #554: update Reach for missing file types. 18 October 2017, 20:58:25 UTC
67844a5 Tom Hicks 18 October 2017, 19:33:44 UTC Issue #554: update Reach for missing file types. 18 October 2017, 19:33:44 UTC
0d8db86 Tom Hicks 18 October 2017, 18:43:54 UTC WIP: move core client, test, and config to Processors. 18 October 2017, 18:43:54 UTC
4d93419 Mihai Surdeanu 10 October 2017, 19:13:31 UTC Merge pull request #555 from bgyori/cli_txt Add txt to regexp for finding files for reading in ReachCLI 10 October 2017, 19:13:31 UTC
c1015d2 Ben Gyori 10 October 2017, 16:09:09 UTC Add txt to regexp finding files for reading 10 October 2017, 18:46:28 UTC
e141119 Tom Hicks 04 October 2017, 22:56:58 UTC Create Reach branch proc6.1.5 to track changes in Processors 6.1.5-SNAPSHOT. 04 October 2017, 22:56:58 UTC
84b5db8 Tom Hicks 04 October 2017, 22:20:12 UTC Merge pull request #553 from clulab/proc6.1.4 Update Reach to use released Processors 6.1.4. 04 October 2017, 22:20:12 UTC
7275256 Tom Hicks 04 October 2017, 21:50:15 UTC Merge latest 'master' into proc6.1.4. 04 October 2017, 21:50:15 UTC
97cdaaa Tom Hicks 04 October 2017, 21:48:07 UTC Update to use Processors 6.1.4. Allow args in POST body of built-in server. 04 October 2017, 21:48:07 UTC
72064c6 Tom Hicks 29 September 2017, 00:03:39 UTC Merge pull request #552 from clulab/postbody Add API server route to process args in body of POST 29 September 2017, 00:03:39 UTC
f1c06d2 Tom Hicks 28 September 2017, 22:49:46 UTC Add API server route to process text in body of POST. Update API help and tests. 28 September 2017, 22:49:46 UTC
545c5dc Tom Hicks 24 September 2017, 23:32:07 UTC Create Reach branch proc6.1.4 to track changes in Processors 6.1.4-SNAPSHOT. 24 September 2017, 23:32:07 UTC
794f6ff Tom Hicks 24 September 2017, 23:19:23 UTC Merge pull request #548 from clulab/proc6.1.3 Update build to use newly released Processors 6.1.3 24 September 2017, 23:19:23 UTC
6fb0a25 Tom Hicks 24 September 2017, 22:49:38 UTC Update build to use newly released Processors 6.1.3. 24 September 2017, 22:49:38 UTC
e1f9de0 Tom Hicks 24 September 2017, 21:45:10 UTC Update to use Akka 2.5.4. 24 September 2017, 21:45:10 UTC
308efe8 Tom Hicks 24 September 2017, 20:21:44 UTC Merge branch 'proctest' into proc6.1.3 24 September 2017, 20:21:44 UTC
f6e7a66 Tom Hicks 24 September 2017, 19:55:36 UTC Merge latest 'master' into proc6.1.3 24 September 2017, 19:55:36 UTC
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