646ca7a | ST John | 15 March 2021, 11:16:47 UTC | format | 15 March 2021, 11:16:47 UTC |
d0b4556 | ST John | 15 March 2021, 11:15:58 UTC | Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp | 15 March 2021, 11:15:58 UTC |
e68e2fe | ST John | 15 March 2021, 11:05:22 UTC | only run mypy on gpflow/tests (not docs) | 15 March 2021, 11:05:22 UTC |
9f3410b | ST John | 15 March 2021, 10:41:06 UTC | fixes via mypy | 15 March 2021, 10:41:06 UTC |
1831a5d | st-- | 07 March 2021, 14:05:42 UTC | Update README and require TensorFlow>=2.2 (#1647) Add explanation of TensorFlow/TFP dependencies (as brought up by https://github.com/GPflow/GPflow/issues/1623) | 07 March 2021, 14:05:42 UTC |
94fa390 | st-- | 25 February 2021, 16:12:48 UTC | New _add_noise_cov method for GPR model class to make it more easily extensible (#1645) | 25 February 2021, 16:12:48 UTC |
3ea8731 | Vatsal Aggarwal | 18 February 2021, 16:29:39 UTC | Compatibility between Monitor API and SciPy optimizer (#1642) Co-authored-by: st-- <st--@users.noreply.github.com> | 18 February 2021, 16:29:39 UTC |
406d2d0 | Samuel Willis | 03 February 2021, 13:45:29 UTC | fix ModelToTensorBoard max_size = -1 (#1619) | 03 February 2021, 13:45:29 UTC |
797fed1 | st-- | 03 February 2021, 12:38:37 UTC | Mypy build fix (#1637) | 03 February 2021, 12:38:37 UTC |
bc04306 | Vincent Dutordoir | 13 January 2021, 16:31:51 UTC | Quickfix dynamic shapes in quadrature (#1626) | 13 January 2021, 16:31:51 UTC |
692ab2f | ST John | 13 January 2021, 14:22:43 UTC | Dispatcher instead of if-elif for posterior_class | 13 January 2021, 14:22:43 UTC |
696b30e | ST John | 13 January 2021, 14:22:13 UTC | move out fully_correlated path | 13 January 2021, 14:22:13 UTC |
48d2050 | ST John | 12 January 2021, 17:00:49 UTC | less adjoints | 12 January 2021, 17:00:49 UTC |
4fd77b4 | ST John | 12 January 2021, 16:51:32 UTC | clean up FUllyCorrelated branching | 12 January 2021, 16:51:32 UTC |
cb9ad16 | stefanos | 12 January 2021, 16:21:26 UTC | creating additional posterior objects for cleaner structure | 12 January 2021, 16:21:26 UTC |
9f5b79b | ST John | 12 January 2021, 14:39:51 UTC | write out iv -> inducing_variable | 12 January 2021, 14:39:51 UTC |
fe731ba | ST John | 12 January 2021, 14:14:37 UTC | Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp | 12 January 2021, 14:14:37 UTC |
0a2c2e3 | ST John | 12 January 2021, 14:13:59 UTC | add comments | 12 January 2021, 14:13:59 UTC |
721756a | jakoblindinger | 12 January 2021, 12:31:17 UTC | list structured-dgp as downstream project (#1621) Co-authored-by: st-- <st--@users.noreply.github.com> | 12 January 2021, 12:31:17 UTC |
7688477 | st-- | 12 January 2021, 11:59:48 UTC | Fix tests for TF 2.4/TFP 0.12 (#1625) * fix test_deepcopy * increase test_scipy_jit tolerance to make it pass | 12 January 2021, 11:59:48 UTC |
f6a8bf4 | ST John | 11 January 2021, 15:06:27 UTC | T -> áµ€ in math comments | 11 January 2021, 15:06:27 UTC |
c7d3b76 | ST John | 21 December 2020, 12:16:09 UTC | revert to posterior() method to fix printing | 21 December 2020, 12:16:09 UTC |
19d735f | ST John | 21 December 2020, 12:05:56 UTC | format | 21 December 2020, 12:05:56 UTC |
56c5aff | ST John | 21 December 2020, 12:05:23 UTC | code review suggestions | 21 December 2020, 12:05:23 UTC |
870baaf | st-- | 21 December 2020, 12:03:17 UTC | Apply suggestions from code review Co-authored-by: Fergus <fergus2@gmail.com> | 21 December 2020, 12:03:17 UTC |
f4cfcc9 | ST John | 21 December 2020, 12:01:33 UTC | slightly increase atol/rtol in test_scipy following Posterior / math reordering changes | 21 December 2020, 12:01:33 UTC |
47e5b78 | stefanos | 18 December 2020, 03:29:03 UTC | fully correlated mok works, all multioutput tests pass. needs clean-up | 18 December 2020, 03:29:03 UTC |
735f6b0 | stefanos | 17 December 2020, 20:42:28 UTC | fully correlated mok with full_cov==full_output_cov works | 17 December 2020, 20:42:28 UTC |
ff07c9c | stefanos | 17 December 2020, 19:07:39 UTC | wip for more general predict_f | 17 December 2020, 19:07:39 UTC |
23e532a | ST John | 17 December 2020, 14:56:20 UTC | enable gradient flow through posterior for training | 17 December 2020, 14:56:20 UTC |
1337995 | stefanos | 17 December 2020, 14:21:27 UTC | correct argument passing to Posterior | 17 December 2020, 14:21:27 UTC |
d632732 | stefanos | 17 December 2020, 14:04:29 UTC | removing initial None value for the cached variables in posterior class | 17 December 2020, 14:04:29 UTC |
2fd59c6 | stefanos | 17 December 2020, 13:56:04 UTC | make posterior work with parameter object w/o recreating variables | 17 December 2020, 13:56:04 UTC |
ad3b2ba | stefanos | 17 December 2020, 12:33:04 UTC | black format | 17 December 2020, 12:33:04 UTC |
ba71ff1 | stefanos | 17 December 2020, 11:52:36 UTC | added posterior object to new module | 17 December 2020, 11:54:17 UTC |
00c4b20 | ST John | 16 December 2020, 21:21:19 UTC | fix printing tests | 16 December 2020, 21:21:19 UTC |
ac8c585 | ST John | 16 December 2020, 18:30:07 UTC | avoid recreating parameter | 16 December 2020, 18:30:07 UTC |
b15aee1 | ST John | 16 December 2020, 18:17:57 UTC | NewSVGP posterior test | 16 December 2020, 18:17:57 UTC |
92e3176 | ST John | 16 December 2020, 18:17:19 UTC | fix imports | 16 December 2020, 18:17:19 UTC |
148a92e | ST John | 16 December 2020, 18:05:32 UTC | OldSVGP -> NewSVGP | 16 December 2020, 18:05:32 UTC |
dd2e0a5 | ST John | 16 December 2020, 18:03:31 UTC | NewSVGP | 16 December 2020, 18:04:02 UTC |
60e19f8 | st-- | 01 December 2020, 11:59:33 UTC | bump version to 2.1.4 (#1612) | 01 December 2020, 11:59:33 UTC |
61fc327 | Joel Berkeley | 26 November 2020, 17:14:04 UTC | list trieste as downstream project (#1611) * list trieste as downstream project Co-authored-by: Joel Berkeley <joel.berkeley@secondmind.ai> Co-authored-by: st-- <st--@users.noreply.github.com> | 26 November 2020, 17:14:04 UTC |
282d1cd | polaschwoebel | 15 October 2020, 17:54:23 UTC | HeteroskedasticTFPConditional should construct tensors at class-construction, not at module-import time (#1598) | 15 October 2020, 17:54:23 UTC |
8562503 | st-- | 08 October 2020, 15:04:55 UTC | Replace len(inducing_variable) with inducing_variable.num inducing property (#1594) Adds support for inducing variables with dynamically changing shape. Change usage from `len(inducing_variable)` to `inducing_variable.num_inducing` instead. Resolves #1578. | 08 October 2020, 15:04:55 UTC |
9f95d87 | st-- | 07 October 2020, 12:01:42 UTC | bump version to 2.1.3 (#1590) | 07 October 2020, 12:01:42 UTC |
cfd1830 | st-- | 07 October 2020, 11:46:04 UTC | Doc requirements update (#1592) * update doc requirements * update copyright | 07 October 2020, 11:46:04 UTC |
638c4ed | st-- | 07 October 2020, 10:07:35 UTC | Bugfix for independent_interdomain_conditional (#1583) Resolves #818 Co-authored-by: ST John <st@secondmind.ai> | 07 October 2020, 10:07:35 UTC |
39c8a76 | st-- | 06 October 2020, 15:25:12 UTC | enable trigger-docs-generation for master branch as well (#1580) Co-authored-by: ST John <st@secondmind.ai> | 06 October 2020, 15:25:12 UTC |
3baf368 | st-- | 06 October 2020, 15:03:54 UTC | Remove tiling workaround for lack of broadcasting in previous TensorFlow versions (#1585) We used to tile in gauss_kl() to work around TensorFlow's lack of broadcasting. Since TensorFlow 2.2, this is finally working, and this PR removes the tiling for TensorFlow>=2.2. Resolves #1321. Co-authored-by: ST John <st@secondmind.ai> | 06 October 2020, 15:03:54 UTC |
e248051 | st-- | 06 October 2020, 14:12:33 UTC | update intro_to_gpflow2 notebook to account for saved_model now working (#1586) Co-authored-by: ST John <st@secondmind.ai> Co-authored-by: Sandeep Tailor <s.tailor@insysion.net> | 06 October 2020, 14:12:33 UTC |
98f7997 | st-- | 06 October 2020, 13:30:52 UTC | fix broken API docs (#1587) * move Version check inside reset_cache_bijectors to not confuse Sphinx * revert non-working "projects: 7" line in bugs issue template * fix code-block type in intro.rst | 06 October 2020, 13:30:52 UTC |
8dc912e | st-- | 06 October 2020, 12:37:15 UTC | Fix notebook heading levels and add links (#1579) * fix heading levels * add cross-references | 06 October 2020, 12:37:15 UTC |
7d6a6da | st-- | 05 October 2020, 15:50:31 UTC | Update issue templates (#1581) * automatically add bugs to bug project board * disable blank issues Co-authored-by: ST John <st@secondmind.ai> | 05 October 2020, 15:50:31 UTC |
b74e19e | st-- | 05 October 2020, 10:48:01 UTC | Explicit NotImplementedError on predict_y/predict_log_density with full_(output_)cov=True (#1582) Closes #1569 Co-authored-by: ST John <st@secondmind.ai> | 05 October 2020, 10:48:01 UTC |
8e0744a | st-- | 30 September 2020, 16:57:30 UTC | bump version to 2.1.2 (#1575) | 30 September 2020, 16:57:30 UTC |
65a79e4 | st-- | 30 September 2020, 16:42:05 UTC | isort for consistent imports (#1572) * GPflow now includes an isort check in its CI build. Run with `make format` / `make format-check`. | 30 September 2020, 16:42:05 UTC |
d618fe5 | st-- | 30 September 2020, 13:54:44 UTC | Likelihood quadrature cleanup (#1571) * Global constant for num_gauss_hermite_points default * QuadratureLikelihood with dependency injection (in preparation for unifying with MonteCarloLikelihood) * ScalarLikelihood as QuadratureLikelihood subclass (with _quadrature_dim/_quadrature_log_prob/_quadrature_reduction) * HeteroskedasticTFPConditional: rename argument to `scale_transform` and remove undocumented scaling * DeprecationWarning for deprecated code | 30 September 2020, 13:54:44 UTC |
12395be | st-- | 29 September 2020, 15:17:18 UTC | fix BijectorCache workaround (#1574) Follow-up to #1553 | 29 September 2020, 15:17:18 UTC |
0d3684b | joelberkeley-pio | 17 September 2020, 15:33:35 UTC | add packaging to dependencies; add 'import gpflow' check (#1568) | 17 September 2020, 15:33:35 UTC |
ad6e031 | Vincent Dutordoir | 15 September 2020, 15:37:25 UTC | Multi Latent Likelihoods using new quadrature Likelihoods (#1559) * HeteroskedasticLikelihood base class draft * fixup * cleanup * cleanup heteroskedastic * multioutput likelihood WIP * Notebook exemplifying HeteroskedasticTFPDistribution usage (#1462) * fixes * typo fix; reshaping fix * notebook showing how to use HeteroskedasticTFPDistribution likelihood * converting to .pct.py format * removed .ipynb * better descriptions * black auto-formatting Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> * note and bugfix * add comment * Adding heteroskedastic tests (#1508) These tests ensure that heteroskedastic likelihood with a constant variance, will give the same results as a Gaussian likelihood with the same variance. * testing * added QuadratureLikelihood to base, refactored ScalarLikelihood to use it * fix * using the first dimension to hold the quadrature summation * adapting ndiagquad wrapper * merged with gustavocmv/quadrature-change-shape * removed unecessary tf.init_scope * removed print and tf.print * removed print and tf.print * Type annotations Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * Work * Fix test * Remove multioutput from PR * Fix notebook * Add student t test * More tests * Copyright * Removed NDiagGHQuadratureLikelihood class in favor of non-abstract QuadratureLikelihood * _set_latent_and_observation_dimension_eagerly * n_gh ---> num_gauss_hermite_points * removed NDiagGHQuadratureLikelihood from test * black * bugfix * removing NDiagGHQuadratureLikelihood from test * fixed bad commenting * black * refactoring scalar likelihood * adding dtype casts to quadrature * black * small merging fixes * DONE: swap n_gh for num_gauss_hermite_points * black Co-authored-by: ST John <st@prowler.io> Co-authored-by: gustavocmv <47801305+gustavocmv@users.noreply.github.com> Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: st-- <st--@users.noreply.github.com> Co-authored-by: joshuacoales-pio <47976939+joshuacoales-pio@users.noreply.github.com> | 15 September 2020, 15:37:25 UTC |
799b659 | gustavocmv | 15 September 2020, 12:36:38 UTC | Scalar Likelihood Refactoring (#1566) * refactoring scalar likelihood * adding dtype casts to quadrature * black Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> | 15 September 2020, 12:36:38 UTC |
0336b27 | st-- | 14 September 2020, 17:00:04 UTC | Merge pull request #1564 from GPflow/st/remerge_master_210 Merge master back into develop | 14 September 2020, 17:00:04 UTC |
d51c487 | st-- | 14 September 2020, 16:39:27 UTC | Merge branch 'develop' into st/remerge_master_210 | 14 September 2020, 16:39:27 UTC |
234a734 | ST John | 14 September 2020, 16:38:41 UTC | Merge remote-tracking branch 'origin/master' into st/remerge_master_210 | 14 September 2020, 16:38:41 UTC |
5c49580 | st-- | 14 September 2020, 16:33:55 UTC | bump version to 2.1.1 (#1562) | 14 September 2020, 16:33:55 UTC |
67e583c | Artem Artemev | 10 September 2020, 13:41:58 UTC | Fix SGPR upper bound for non zero mean functions (#1560) | 10 September 2020, 13:41:58 UTC |
a0df00c | st-- | 10 September 2020, 11:45:58 UTC | add license text to all gpflow submodules (#1480) Adds Copyright notice and Apache license text (short form) to the preamble of all python files underneath gpflow/. Also unifies the copyright notice to simply state "The GPflow Contributors" to simplify maintenance of the copyright notices (this does not affect who holds copyright). | 10 September 2020, 11:45:58 UTC |
7b2a0c8 | st-- | 08 September 2020, 15:44:27 UTC | Fixes for tf 2.3 / tfp 0.11.0 compatiblity (#1553) * tensorflow_probability has been changing internals around their caching; here we update the cache-clearing for our deepcopy so that it works both for tensorflow_probability < 0.11.0, == 0.11.0 (with a workaround for the bug contained therein), and > 0.11.0 (in their master branch they fixed the bug and changed internals again) * revert pinning of tf/tfp, numpy, scipy; rely on `pip --use-feature=2020-resolver` * pin black==19.10b0 as the 20.8b0 upgrade changes formatting a lot * disable test broken by tensorflow 2.3 Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> | 08 September 2020, 15:44:27 UTC |
f3c5110 | Vincent Dutordoir | 27 August 2020, 11:22:49 UTC | Release 2.1.0 (#1552) * Update pull request template (#1510) Clarify template to make it easier for contributors to fill in relevant information. * Temporary workaround for tensorflow_probability dependency issue (#1522) * pin cloudpickle==1.3.0 as temporary workaround for tensorflow/probability#991 to unblock our build (to be reverted once fixed upstream) * Update readme with new project using GPflow (#1530) * fix bug in varying_noise notebook (#1526) * Fix formatting in docs (intro.md) and restore link removed by #1498 (#1520) * pin tensorflow<2.3 tensorflow-probability<0.11 (#1537) * Quadrature Refactoring (#1505) * WIP: quadrature refactoring * Removing old ndiagquad code * deleted test code * formatting and type-hint * merge modules * black formatting * formatting * solving failing tests * fixing failing tests * fixes * adapting tests for new syntax, keeping numerical behavior * black formatting * remove printf * changed code for compiled tf compatibility * black * restored to original version * undoing changes * renaming * renaming * renaming * reshape kwargs * quadrature along axis=-2, simplified broadcasting * black * docs * docs * helper function * docstrings and typing * added new and old quadrature equivalence tests * black * Removing comments Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * Typo Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * notation Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * reshape_Z_dZ return docstring fix * FIX: quad_old computed with the ndiagquad_old Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * more readable implementation Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * tf.ensure_shape added * removed ndiagquad * removed ndiagquad * Revert "removed ndiagquad" This reverts commit 7bb0e9f1e0f2b0e225a2b8a5b3092c4c2f24ba91. * FIX: shape checking of dZ * Revert "removed ndiagquad" This reverts commit 8e235241a697696e361158c30ff9aa9b4cc69f8a. Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: ST John <st@prowler.io> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * Add base_conditional_with_lm function (#1528) * Added base_conditional_with_lm function, which accepts Lm instead of Kmm Co-authored-by: Neil Ferguson <neil@prowler.io> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> Co-authored-by: st-- <st--@users.noreply.github.com> * Fixed separate_independent_conditional to correctly handle q_sqrt=None. (#1533) * Fixed separate_independent_conditional to correctly handle q_sqrt=None. Co-authored-by: Aidan Scannell <scannell.aidan@gmail.com> Co-authored-by: st-- <st--@users.noreply.github.com> * Bump version numbers to 2.1.0. (#1544) * Re-introduce pytest-xdist (#1541) Enables pytest-xdist for locally running tests (`make test`) on multiple cores in parallel. * check dependency versions are valid on CI (#1536) * Update to not use custom image (#1545) * Update to not use custom image * Add test requirements * Update parameter to be savable (#1518) * Fix for quadrature failure mode when autograph was set to False (#1548) * Fix and test * Change shape of quadrature tensors for better broadcasting (#1542) * using the first dimension to hold the quadrature summation * adapting ndiagquad wrapper * Changed bf for bX in docstrings Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: st-- <st--@users.noreply.github.com> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * Update min TFP supported version to 0.10 (#1551) * Broadcasting constant and zero mean function (#1550) * Broadcasting constant and zero mean function * Use rank instead of ndim Co-authored-by: st-- <st--@users.noreply.github.com> Co-authored-by: joelberkeley-pio <joel.berkeley@prowler.io> Co-authored-by: gustavocmv <47801305+gustavocmv@users.noreply.github.com> Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: ST John <st@prowler.io> Co-authored-by: Neil Ferguson <nfergu@users.noreply.github.com> Co-authored-by: Neil Ferguson <neil@prowler.io> Co-authored-by: Aidan Scannell <as12528@my.bristol.ac.uk> Co-authored-by: Aidan Scannell <scannell.aidan@gmail.com> Co-authored-by: Sandeep Tailor <s.tailor@insysion.net> Co-authored-by: Artem Artemev <art.art.v@gmail.com> | 27 August 2020, 11:22:49 UTC |
5a945d6 | Vincent Dutordoir | 27 August 2020, 11:07:08 UTC | Broadcasting constant and zero mean function (#1550) * Broadcasting constant and zero mean function * Use rank instead of ndim | 27 August 2020, 11:07:08 UTC |
903b60d | Vincent Dutordoir | 27 August 2020, 10:50:00 UTC | Update min TFP supported version to 0.10 (#1551) | 27 August 2020, 10:50:00 UTC |
d025f96 | gustavocmv | 24 August 2020, 18:54:38 UTC | Change shape of quadrature tensors for better broadcasting (#1542) * using the first dimension to hold the quadrature summation * adapting ndiagquad wrapper * Changed bf for bX in docstrings Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: st-- <st--@users.noreply.github.com> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> | 24 August 2020, 18:54:38 UTC |
6894af5 | Vincent Dutordoir | 24 August 2020, 10:55:29 UTC | Fix for quadrature failure mode when autograph was set to False (#1548) * Fix and test | 24 August 2020, 10:55:29 UTC |
8c65ef6 | Artem Artemev | 17 August 2020, 13:26:52 UTC | Update parameter to be savable (#1518) | 17 August 2020, 13:26:52 UTC |
4682722 | Vincent Dutordoir | 14 August 2020, 09:53:16 UTC | Update to not use custom image (#1545) * Update to not use custom image * Add test requirements | 14 August 2020, 09:53:16 UTC |
79b1a0b | joelberkeley-pio | 13 August 2020, 12:09:56 UTC | check dependency versions are valid on CI (#1536) | 13 August 2020, 12:09:56 UTC |
f9eb123 | st-- | 13 August 2020, 11:46:44 UTC | Re-introduce pytest-xdist (#1541) Enables pytest-xdist for locally running tests (`make test`) on multiple cores in parallel. | 13 August 2020, 11:46:44 UTC |
6bb7df9 | Sandeep Tailor | 13 August 2020, 10:08:36 UTC | Bump version numbers to 2.1.0. (#1544) | 13 August 2020, 10:08:36 UTC |
5744b51 | Aidan Scannell | 04 August 2020, 17:31:56 UTC | Fixed separate_independent_conditional to correctly handle q_sqrt=None. (#1533) * Fixed separate_independent_conditional to correctly handle q_sqrt=None. Co-authored-by: Aidan Scannell <scannell.aidan@gmail.com> Co-authored-by: st-- <st--@users.noreply.github.com> | 04 August 2020, 17:31:56 UTC |
20c5ee4 | Neil Ferguson | 03 August 2020, 14:38:29 UTC | Add base_conditional_with_lm function (#1528) * Added base_conditional_with_lm function, which accepts Lm instead of Kmm Co-authored-by: Neil Ferguson <neil@prowler.io> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> Co-authored-by: st-- <st--@users.noreply.github.com> | 03 August 2020, 14:38:29 UTC |
d995194 | gustavocmv | 30 July 2020, 11:58:40 UTC | Quadrature Refactoring (#1505) * WIP: quadrature refactoring * Removing old ndiagquad code * deleted test code * formatting and type-hint * merge modules * black formatting * formatting * solving failing tests * fixing failing tests * fixes * adapting tests for new syntax, keeping numerical behavior * black formatting * remove printf * changed code for compiled tf compatibility * black * restored to original version * undoing changes * renaming * renaming * renaming * reshape kwargs * quadrature along axis=-2, simplified broadcasting * black * docs * docs * helper function * docstrings and typing * added new and old quadrature equivalence tests * black * Removing comments Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * Typo Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * notation Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * reshape_Z_dZ return docstring fix * FIX: quad_old computed with the ndiagquad_old Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * more readable implementation Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> * tf.ensure_shape added * removed ndiagquad * removed ndiagquad * Revert "removed ndiagquad" This reverts commit 7bb0e9f1e0f2b0e225a2b8a5b3092c4c2f24ba91. * FIX: shape checking of dZ * Revert "removed ndiagquad" This reverts commit 8e235241a697696e361158c30ff9aa9b4cc69f8a. Co-authored-by: Gustavo Carvalho <gustavo.carvalho@delfosim.com> Co-authored-by: ST John <st@prowler.io> Co-authored-by: Vincent Dutordoir <dutordoirv@gmail.com> | 30 July 2020, 11:58:40 UTC |
65aea21 | joelberkeley-pio | 30 July 2020, 10:13:27 UTC | pin tensorflow<2.3 tensorflow-probability<0.11 (#1537) | 30 July 2020, 10:13:27 UTC |
3c17a7d | st-- | 17 July 2020, 13:13:20 UTC | Fix formatting in docs (intro.md) and restore link removed by #1498 (#1520) | 17 July 2020, 13:13:20 UTC |
937222e | st-- | 16 July 2020, 20:02:21 UTC | fix bug in varying_noise notebook (#1526) | 16 July 2020, 20:02:21 UTC |
f1842a9 | Vincent Dutordoir | 16 July 2020, 10:25:35 UTC | Update readme with new project using GPflow (#1530) | 16 July 2020, 10:25:35 UTC |
d69b17d | st-- | 06 July 2020, 10:31:03 UTC | Temporary workaround for tensorflow_probability dependency issue (#1522) * pin cloudpickle==1.3.0 as temporary workaround for tensorflow/probability#991 to unblock our build (to be reverted once fixed upstream) | 06 July 2020, 10:31:03 UTC |
34b023a | st-- | 02 July 2020, 15:32:57 UTC | Merge pull request #1512 from GPflow/master Update develop with master | 02 July 2020, 15:32:57 UTC |
965189d | st-- | 02 July 2020, 10:10:16 UTC | Update pull request template (#1510) Clarify template to make it easier for contributors to fill in relevant information. | 02 July 2020, 10:10:16 UTC |
acaccfd | polaschwoebel | 23 June 2020, 10:52:20 UTC | updated models.gpr docstring (#1511) Doc update. Resolves https://github.com/GPflow/docs/issues/4 * updated models.gpr docstring * Elaboration. Co-authored-by: Pola Elisabeth Schwobel <posc@MacBook-Pro.local> Co-authored-by: Mark van der Wilk <markvanderw@gmail.com> | 23 June 2020, 10:52:20 UTC |
31dbbe5 | joelberkeley-pio | 11 June 2020, 14:37:47 UTC | Merge pull request #1506 from GPflow/develop Release 2.0.5 | 11 June 2020, 14:37:47 UTC |
3669d13 | joelberkeley-pio | 11 June 2020, 13:18:56 UTC | bump version to 2.0.5 (#1504) | 11 June 2020, 13:18:56 UTC |
7db2276 | joelberkeley-pio | 11 June 2020, 10:59:20 UTC | fix type in Parameter type check (#1500) | 11 June 2020, 10:59:20 UTC |
a9e125e | John Mcleod | 11 June 2020, 09:05:30 UTC | Ensure the plots appear in the generated documentation. (#1503) | 11 June 2020, 09:05:30 UTC |
390e4f0 | adam | 10 June 2020, 12:55:02 UTC | Update link to distill article on GPs (#1498) Note that this links to a *different* article from the previous one - we will add the old link back in as well once it is back online. | 10 June 2020, 12:55:02 UTC |
77eacca | Vincent Dutordoir | 04 June 2020, 16:03:48 UTC | Supporting preslicing of multi-output combination kernels (#1495) | 04 June 2020, 16:03:48 UTC |
6fda0e9 | st-- | 04 June 2020, 14:24:52 UTC | improve NaturalGradient optimizer documentation and add shape checks (#1489) As discussed in #878, GPflow's NaturalGradient optimizer does not implement the diagonal covariance parametrization (`q_diag=True`). This PR clarifies this in the documentation and adds extra shape checks. | 04 June 2020, 14:24:52 UTC |
647ca90 | Prakhar Verma | 02 June 2020, 15:09:19 UTC | Corrected variables name in convolutional notebook for better understanding (#1492) | 02 June 2020, 15:09:19 UTC |
12243a6 | st-- | 02 June 2020, 12:16:24 UTC | clean up Scipy types & code (#1454) Doc improvement: Fixes some typos in the Scipy docstring and adds a note on scipy minimize()'s callback argument vs GPflow Scipy().minimize()'s step_callback. Cleans up types in the module. Backwards-incompatible change: the `step_callback` that can be passes to the Scipy.minimize() method is changed to take its arguments by position, not name; in line with the StepCallback type signature (and in line with Python's typing.Callable documentation which suggests that callbacks should take arguments preferentially by position, not name). | 02 June 2020, 12:16:24 UTC |
89af61e | st-- | 01 June 2020, 16:12:48 UTC | quickfix to enable GPR to be used with variable data (#1490) GPR used the X.shape attribute instead of calling tf.shape(X); this prevented using it with Variable data, which is now successfully demonstrated in a test. | 01 June 2020, 16:12:48 UTC |