https://github.com/ENCODE-DCC/encoded
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Revision | Author | Date | Message | Commit Date |
---|---|---|---|---|
8ce8e28 | Philip Adenekan | 07 April 2020, 02:42:05 UTC | test | 07 April 2020, 02:42:05 UTC |
67d9e4f | Laurence Rowe | 02 April 2020, 22:52:48 UTC | SNO-144-redirect-downloads-through-nginx-or-apache (#3182) | 02 April 2020, 22:52:48 UTC |
8e7262b | emro | 02 April 2020, 20:08:30 UTC | REG-5166 change organoid color (#3213) | 02 April 2020, 20:08:30 UTC |
a9b11da | Phil | 02 April 2020, 00:09:15 UTC | ENCD-5189-additional-pytest-cleanup (#3223) | 02 April 2020, 00:09:15 UTC |
4284a12 | Bonita Lam | 01 April 2020, 23:31:17 UTC | ENCD-5131-add-sprite-assay-ontology-update (#3215) | 01 April 2020, 23:31:17 UTC |
72b82e4 | emro | 01 April 2020, 23:30:04 UTC | ENCD-5163 deemphasize hg19 screen link (#3211) | 01 April 2020, 23:30:04 UTC |
592135d | Ben Hitz | 30 March 2020, 20:54:31 UTC | Update to v98.0 (#3225) | 30 March 2020, 20:54:31 UTC |
c67d7a2 | Yunhai Luo | 26 March 2020, 17:47:43 UTC | ENCD-5186-Fix-FCC-audit-script-error-with-biosample-ontology (#3219) | 26 March 2020, 17:47:43 UTC |
f0c897f | jenjou | 26 March 2020, 17:47:03 UTC | ENCD-5175-fix-validation-error-crispr-insertion (#3214) | 26 March 2020, 17:47:03 UTC |
e687956 | Phil | 26 March 2020, 16:22:33 UTC | ENCD-5180-re-matrix-left-align-term-names (#3216) | 26 March 2020, 16:22:33 UTC |
31d6aed | emro | 26 March 2020, 16:21:45 UTC | ENCD-5182 respect filters for viz (#3217) | 26 March 2020, 16:21:45 UTC |
c7aa46f | Phil | 26 March 2020, 15:46:13 UTC | ENCD-5039-reorganize-pytest-fixtures-set (#3206) | 26 March 2020, 15:46:13 UTC |
6f36fe4 | Ben Hitz | 21 March 2020, 00:29:01 UTC | Update snovault 1.0.43 (#3212) | 21 March 2020, 00:29:01 UTC |
f116e29 | Forrest Tanaka | 21 March 2020, 00:03:42 UTC | ENCD-4540 Cart visualizations (#3205) | 21 March 2020, 00:03:42 UTC |
5d11859 | keenangraham | 20 March 2020, 22:30:44 UTC | SNO-146-clean-up-threadmanager-on-pyramid-retry-exception (#3207) | 20 March 2020, 22:30:44 UTC |
17ba1ce | Yunhai Luo | 20 March 2020, 22:27:45 UTC | ENCD-5133-calculate-for-analyses (#3200) | 20 March 2020, 22:27:45 UTC |
88affbe | Ingrid Youngworth | 20 March 2020, 22:14:35 UTC | ENCD-5145-remove-gRNA-tiled-loci-update-examined-loci (#3183) | 20 March 2020, 22:14:35 UTC |
525a8ff | Forrest Tanaka | 20 March 2020, 22:13:20 UTC | ENCD-5150-rendering-error (#3209) | 20 March 2020, 22:13:20 UTC |
45d6b95 | Casey Litton | 20 March 2020, 22:12:17 UTC | ENCD-5168-allow-apache-status-monitoring (#3210) | 20 March 2020, 22:12:17 UTC |
7c5c233 | Bonita Lam | 20 March 2020, 19:58:41 UTC | ENCD-5123-expt-audit-processed-files-analyses (#3192) | 20 March 2020, 19:58:41 UTC |
43021fa | emro | 19 March 2020, 22:57:17 UTC | ENCD-2666 mouse dev matrix (#3198) | 19 March 2020, 22:57:17 UTC |
036d2e0 | Yunhai Luo | 19 March 2020, 22:56:35 UTC | ENCD-5090-apply-experiment-audits-to-fcc-experiments (#3169) | 19 March 2020, 22:56:35 UTC |
f86e9fa | khzlin | 18 March 2020, 20:54:02 UTC | ENCD-5117-update-mixed-read-length-audit (#3193) | 18 March 2020, 20:54:02 UTC |
c8ffbf0 | jenjou | 18 March 2020, 20:47:41 UTC | ENCD-5110-add-gm-categories (#3181) | 18 March 2020, 20:47:41 UTC |
69dbe3d | Meenakshi Kagda | 18 March 2020, 20:46:18 UTC | ENCD- 5125-add-factorbook (#3191) | 18 March 2020, 20:46:18 UTC |
26870b9 | jenjou | 18 March 2020, 19:52:14 UTC | ENCD-5087-add-subreads-dependencies (#3180) | 18 March 2020, 19:52:14 UTC |
dc4b38b | Forrest Tanaka | 18 March 2020, 15:36:16 UTC | ENCD-5082-file-pagination (#3201) | 18 March 2020, 15:36:16 UTC |
80d1626 | Yunhai Luo | 18 March 2020, 15:30:43 UTC | ENCD-5051-generating-QC-table-for-experimental-series (#3138) | 18 March 2020, 15:30:43 UTC |
7472e35 | Yunhai Luo | 18 March 2020, 15:29:35 UTC | ENCD-5129-check-if-view-has-type (#3199) | 18 March 2020, 15:29:35 UTC |
63d3d03 | jenjou | 18 March 2020, 15:27:23 UTC | ENCD-5143-remove-properties-gene_type_quant_qc (#3185) | 18 March 2020, 15:27:23 UTC |
537326b | Bonita Lam | 17 March 2020, 23:57:19 UTC | ENCD-5144-add-dna-cloning-biosampletype (#3184) | 17 March 2020, 23:57:19 UTC |
afa2ad3 | Bonita Lam | 17 March 2020, 23:49:44 UTC | ENCD-5139-add-post-nucleic-acid-time-biosample (#3188) | 17 March 2020, 23:49:44 UTC |
cad4dde | Ingrid Youngworth | 17 March 2020, 23:40:13 UTC | ENCD-5122-add-Donor-to-Reference (#3197) | 17 March 2020, 23:40:13 UTC |
699078e | Jessica Au | 17 March 2020, 23:37:10 UTC | ENCD-5109-fix-file-validation-audit-for-annotations (#3194) | 17 March 2020, 23:37:10 UTC |
855475f | Ingrid Youngworth | 17 March 2020, 23:32:08 UTC | ENCD-5080-add-library-property-strandedness (#3186) | 17 March 2020, 23:32:08 UTC |
431b8c1 | emro | 17 March 2020, 23:30:39 UTC | ENCD-5069 fix error in gene search (#3166) | 17 March 2020, 23:30:39 UTC |
efe28c5 | khzlin | 17 March 2020, 23:26:26 UTC | ENCD-5118-adjust-unreplicated-experiment-audit (#3187) | 17 March 2020, 23:26:26 UTC |
2a51b9a | Phil | 17 March 2020, 23:24:12 UTC | ENCD-5130-Add-download-btn-to-FCC (#3179) | 17 March 2020, 23:24:12 UTC |
613569c | Ben Hitz | 10 March 2020, 22:10:44 UTC | Update to v97.0 (ubuntu18) (#3196) | 10 March 2020, 22:10:44 UTC |
413e2d8 | Ben Hitz | 04 March 2020, 20:58:32 UTC | ENCD-5137-Fix-ENTEx-text-issue (#3178) | 04 March 2020, 20:58:32 UTC |
ecfb135 | Casey Litton | 28 February 2020, 01:28:53 UTC | Merge pull request #3176 from ENCODE-DCC/master Merge pull request #3175 from ENCODE-DCC/merge-dev-to-master-v97-u18p… | 28 February 2020, 01:28:53 UTC |
b8b3000 | Casey Litton | 28 February 2020, 01:27:31 UTC | Merge pull request #3175 from ENCODE-DCC/merge-dev-to-master-v97-u18py376 ENCD-5132-update-deployment-amis (#3174) | 28 February 2020, 01:27:31 UTC |
ceb727f | Casey Litton | 28 February 2020, 01:25:06 UTC | ENCD-5132-update-deployment-amis (#3174) | 28 February 2020, 01:25:06 UTC |
d78f4c4 | Casey Litton | 28 February 2020, 00:59:09 UTC | Merge v96.1 master to v97rc1 dev (#3173) v96.1 (unreleased) snovault 1.0.41 ---------------------------------- 1. SNO-142 Minor fixes for ubutnu 18 on v96x1rc1 (#3167) 2. SNO-141-update-osx-catalina-readme (#3167) 3. ENCD-5120-1st-post-master-merge-fix-u18-py369 (#3160) 4. ENCD-5112 Update deploy ami map for all builds (#3109) 5. SNO-140 Allow shorting uuids with flag (#3109) 6. SNO-139 Log detailed initial indexing times (#3109) 7. ENCD-3983-update-to-ubuntu-18 (#3109) 8. ENCD-4961-make-base-amis-encd-deployment (#3109) 9. ENCD-4960-add-aws-pems-for-deployment (#3109) 10. SNO-132 Update to py37 lrowe pr with fixes (#3109) 11. ENCD-5061-echo-filenames-in-deploy-scirpt (#3109) 12. ENCD-5060-add-py-requirements-file (#3109) 13. ENCD-5059-fix-pylint-in-deploy-script (#3109) | 28 February 2020, 00:59:09 UTC |
926ecf3 | Casey Litton | 28 February 2020, 00:56:52 UTC | Merge branch 'dev' into master | 28 February 2020, 00:56:52 UTC |
b068c7e | Casey Litton | 28 February 2020, 00:37:30 UTC | update-to-v97rc1 (#3172) 1. ENCD-5071-audit-script-error-when-control-is-series (#3164) 2. ENCD-4626-fix-test-save-change-antibody (#3145) 3. ENCD-4365-roadmap-collection-view (#3142) 4. ENCD-5121-doc-section-publication-data (#3162) 5. ENCD-5073-multiple-targets-FCC (#3154) 6. ENCD-5097-add-Ingrid-to-AntibodyCharacterization-reviewed-by (#3148) 7. ENCD-5033-index-user-made-accounts (#3158) 8. ENCD-4953-calculated-tags-property-experiment (#3155) 9. ENCD-5072 Library construction platform display (#3168) 10. ENCD-5106-add-control-link-FCE (#3151) 11. ENCD-5101-add-target-to-annotation-summary-page (#3165) 12. ENCD-5124-fix-vis-indexing-failure-on-RNA-seq-annotation (#3161) 13. ENCD-5074-exclude-single-cell-from-read-count-audit (#3153) 14. ENCD-5083-restrict-IHEC-dbxref-to-RefEpi-and-Annotation (#3147) 15. ENCD-5034-encyclopedia-v6-addition (#3152) 16. ENCD-4917-new-target-matrix (#3071) 17. ENCD-5075 Adding the change for depmap (#3141) 18. ENCD-5081 add-pooled-clone-sequencing-types (#3144) 19. ENCD-5084-draft-1 (#3149) 20. ENCD-5096-draft-1 (#3150) 21. ENCD-5091 Rebuilt package-lock.json (#3140) 22. ENCD-5077 Remove unnecessary prints (#3146) | 28 February 2020, 00:37:30 UTC |
f52471a | Casey Litton | 28 February 2020, 00:21:12 UTC | update-to-v96.1 (#3171) 1. SNO-142 Minor fixes for ubutnu 18 on v96x1rc1 (#3167) 2. SNO-141-update-osx-catalina-readme (#3167) 3. ENCD-5120-1st-post-master-merge-fix-u18-py369 (#3160) 4. ENCD-5112 Update deploy ami map for all builds (#3109) 5. SNO-140 Allow shorting uuids with flag (#3109) 6. SNO-139 Log detailed initial indexing times (#3109) 7. ENCD-3983-update-to-ubuntu-18 (#3109) 8. ENCD-4961-make-base-amis-encd-deployment (#3109) 9. ENCD-4960-add-aws-pems-for-deployment (#3109) 10. SNO-132 Update to py37 lrowe pr with fixes (#3109) 11. ENCD-5061-echo-filenames-in-deploy-scirpt (#3109) 12. ENCD-5060-add-py-requirements-file (#3109) 13. ENCD-5059-fix-pylint-in-deploy-script (#3109) | 28 February 2020, 00:21:12 UTC |
549198f | Casey Litton | 28 February 2020, 00:13:14 UTC | Merge pull request #3167 from ENCODE-DCC/v96x1rc1-updates V96x1rc1 updates | 28 February 2020, 00:13:14 UTC |
931f8a9 | Ingrid Youngworth | 27 February 2020, 23:45:56 UTC | ENCD-5071-audit-script-error-when-control-is-series (#3164) | 27 February 2020, 23:45:56 UTC |
0d2992e | Paul Sud | 27 February 2020, 23:41:13 UTC | ENCD-4626-fix-test-save-change-antibody (#3145) | 27 February 2020, 23:41:13 UTC |
654588e | Phil | 27 February 2020, 23:40:14 UTC | ENCD-4365-roadmap-collection-view (#3142) | 27 February 2020, 23:40:14 UTC |
d39d6af | khzlin | 27 February 2020, 17:59:52 UTC | ENCD-5121-doc-section-publication-data (#3162) | 27 February 2020, 17:59:52 UTC |
9e4d6b5 | Bonita Lam | 27 February 2020, 17:54:23 UTC | ENCD-5073-multiple-targets-FCC (#3154) | 27 February 2020, 17:54:23 UTC |
6efd86d | Ingrid Youngworth | 27 February 2020, 17:52:00 UTC | ENCD-5097-add-Ingrid-to-AntibodyCharacterization-reviewed-by (#3148) | 27 February 2020, 17:52:00 UTC |
a7d7923 | Phil | 27 February 2020, 17:46:35 UTC | ENCD-5033-index-user-made-accounts (#3158) | 27 February 2020, 17:46:35 UTC |
f087467 | Bonita Lam | 27 February 2020, 17:45:42 UTC | ENCD-4953-calculated-tags-property-experiment (#3155) | 27 February 2020, 17:45:42 UTC |
d8e76eb | Forrest Tanaka | 27 February 2020, 17:42:26 UTC | ENCD-5072 Library construction platform display (#3168) | 27 February 2020, 17:42:25 UTC |
1b93516 | Casey Litton | 25 February 2020, 17:41:04 UTC | SNO-142 Minor fixes for ubutnu 18 on v96x1rc1 | 26 February 2020, 18:59:10 UTC |
bb933cf | Bonita Lam | 26 February 2020, 18:14:33 UTC | ENCD-5106-add-control-link-FCE (#3151) | 26 February 2020, 18:14:33 UTC |
22038c9 | Jessica Au | 25 February 2020, 23:32:53 UTC | ENCD-5101-add-target-to-annotation-summary-page (#3165) | 25 February 2020, 23:32:53 UTC |
570ae5e | Yunhai Luo | 25 February 2020, 21:58:59 UTC | ENCD-5124-fix-vis-indexing-failure-on-RNA-seq-annotation (#3161) | 25 February 2020, 21:58:59 UTC |
f2db2cf | Ingrid Youngworth | 25 February 2020, 21:52:25 UTC | ENCD-5074-exclude-single-cell-from-read-count-audit (#3153) | 25 February 2020, 21:52:25 UTC |
eae4516 | Ingrid Youngworth | 25 February 2020, 21:50:14 UTC | ENCD-5083-restrict-IHEC-dbxref-to-RefEpi-and-Annotation (#3147) | 25 February 2020, 21:50:14 UTC |
6acfdc7 | Meenakshi Kagda | 25 February 2020, 21:45:53 UTC | ENCD-5034-encyclopedia-v6-addition (#3152) | 25 February 2020, 21:45:53 UTC |
e59e2b3 | Casey Litton | 24 February 2020, 18:03:07 UTC | SNO-141-update-osx-catalina-readme | 25 February 2020, 19:50:30 UTC |
a78f8f8 | Phil | 22 February 2020, 00:28:58 UTC | ENCD-4917-new-target-matrix (#3071) | 22 February 2020, 00:28:58 UTC |
7bd5c13 | Casey Litton | 21 February 2020, 23:25:02 UTC | ENCD-5120-1st-post-master-merge-fix-u18-py369 (#3160) | 21 February 2020, 23:25:02 UTC |
42daccc | Casey Litton | 21 February 2020, 22:09:25 UTC | Merge pull request #3109 from ENCODE-DCC/ENCD-3983-update-to-ubuntu-18 Encoded v96.0 (pre-release) snovault 1.0.41 --------------------------------------- 1. ENCD-5112 Update deploy ami map for all builds (#3109) 2. SNO-140 Allow shorting uuids with flag (#3109) 3. SNO-139 Log detailed initial indexing times (#3109) 4. ENCD-3983-update-to-ubuntu-18 (#3109) 5. ENCD-4961-make-base-amis-encd-deployment (#3109) 6. ENCD-4960-add-aws-pems-for-deployment (#3109) 7. SNO-132 Update to py37 lrowe pr with fixes (#3109) 8. ENCD-5061-echo-filenames-in-deploy-scirpt (#3109) 9. ENCD-5060-add-py-requirements-file (#3109) 10. ENCD-5059-fix-pylint-in-deploy-script (#3109) | 21 February 2020, 22:09:25 UTC |
a4fe3c7 | Casey Litton | 19 February 2020, 22:44:26 UTC | ENCD-5112 Update deploy ami map for all builds | 21 February 2020, 21:36:15 UTC |
b5616a8 | Casey Litton | 14 February 2020, 19:06:53 UTC | SNO-140 Allow shorting uuids with flag | 21 February 2020, 21:36:15 UTC |
c9c58f8 | Cricket Alicia Sloan | 21 February 2020, 21:12:35 UTC | ENCD-5075 Adding the change for depmap (#3141) | 21 February 2020, 21:12:35 UTC |
d4d19fa | Casey Litton | 14 February 2020, 19:06:04 UTC | SNO-139 Log detailed initial indexing times | 21 February 2020, 21:10:08 UTC |
e6b2d80 | Casey Litton | 15 January 2020, 23:27:30 UTC | ENCD-3983-update-to-ubuntu-18 | 21 February 2020, 21:10:08 UTC |
8161224 | Casey Litton | 10 December 2019, 17:12:40 UTC | ENCD-4961-make-base-amis-encd-deployment | 21 February 2020, 21:10:08 UTC |
07cb39b | Casey Litton | 13 November 2019, 20:49:49 UTC | ENCD-4960-add-aws-pems-for-deployment | 21 February 2020, 21:10:08 UTC |
10d2752 | Laurence Rowe | 25 February 2019, 20:25:26 UTC | SNO-132 Update to py37 lrowe pr with fixes | 21 February 2020, 21:10:08 UTC |
f2968f3 | Casey Litton | 14 January 2020, 21:42:22 UTC | ENCD-5061-echo-filenames-in-deploy-scirpt | 21 February 2020, 21:10:08 UTC |
5705665 | Casey Litton | 10 January 2020, 18:29:27 UTC | ENCD-5060-add-py-requirements-file | 21 February 2020, 21:10:08 UTC |
7cf546a | Casey Litton | 10 January 2020, 18:47:39 UTC | ENCD-5059-fix-pylint-in-deploy-script | 21 February 2020, 21:10:08 UTC |
154dcef | Casey Litton | 21 February 2020, 19:30:07 UTC | Merge pull request #3157 from ENCODE-DCC/sync-dev-to-master-v96x0 | 21 February 2020, 19:30:07 UTC |
ed8a688 | Casey Litton | 21 February 2020, 19:26:03 UTC | Merge pull request #3156 from ENCODE-DCC/sync-master-to-dev-v96x0 Sync master to dev v96x0 | 21 February 2020, 19:26:03 UTC |
28d6b77 | Bonita Lam | 20 February 2020, 19:54:22 UTC | ENCD-5081 add-pooled-clone-sequencing-types (#3144) | 20 February 2020, 19:54:22 UTC |
de59b19 | khzlin | 20 February 2020, 17:23:20 UTC | ENCD-5084-draft-1 (#3149) | 20 February 2020, 17:23:20 UTC |
781ecb9 | khzlin | 20 February 2020, 17:21:42 UTC | ENCD-5096-draft-1 (#3150) | 20 February 2020, 17:21:42 UTC |
7faee10 | Forrest Tanaka | 20 February 2020, 06:43:22 UTC | ENCD-5091 Rebuilt package-lock.json (#3140) | 20 February 2020, 06:43:22 UTC |
1a55a48 | jenjou | 20 February 2020, 06:38:20 UTC | ENCD-5077 Remove unnecessary prints (#3146) | 20 February 2020, 06:38:20 UTC |
e266d50 | Ben Hitz | 15 February 2020, 00:19:51 UTC | Update to 96.0 (#3143) | 15 February 2020, 00:19:51 UTC |
7858efe | Phil | 12 February 2020, 20:15:52 UTC | ENCD-5089-add-back-account-creation-msg (#3139) | 12 February 2020, 20:15:52 UTC |
8c09b4e | Forrest Tanaka | 10 February 2020, 04:49:51 UTC | ENCD-5088-graphlib-crash (#3137) | 10 February 2020, 04:49:51 UTC |
80272f9 | Ben Hitz | 08 February 2020, 03:18:42 UTC | ENCD-5086-remove-chip-seq-matrix-from-menu (#3136) | 08 February 2020, 03:18:42 UTC |
e7de75e | jenjou | 08 February 2020, 00:16:11 UTC | ENCD-5047-no-dependencies-output-types (#3135) | 08 February 2020, 00:16:11 UTC |
b37cce8 | Ingrid Youngworth | 08 February 2020, 00:14:05 UTC | ENCD-4943-fix-bad-ancient-URL-forwards (#3129) | 08 February 2020, 00:14:05 UTC |
64bbc5f | Meenakshi Kagda | 07 February 2020, 18:22:31 UTC | ENCD-5049 add MINT mixture to library object (#3132) | 07 February 2020, 18:22:31 UTC |
994fd83 | khzlin | 07 February 2020, 00:53:48 UTC | ENCD-5056-computation-model-object (#3128) | 07 February 2020, 00:53:48 UTC |
5308e55 | emro | 07 February 2020, 00:50:25 UTC | ENCD-5037-valis-library-update (#3119) | 07 February 2020, 00:50:25 UTC |
2619a8f | emro | 06 February 2020, 22:30:52 UTC | ENCD-5026 toolbar updates (#3133) | 06 February 2020, 22:30:52 UTC |
c9f9c0e | Jessica Au | 06 February 2020, 06:42:52 UTC | ENCD-5057-add-experiment-audit-for-no-processed-data (#3126) | 06 February 2020, 06:42:52 UTC |
3b43f0e | Forrest Tanaka | 05 February 2020, 20:55:17 UTC | ENCD-5078-fcc-insert (#3134) | 05 February 2020, 20:55:17 UTC |
9ac4339 | Yunhai Luo | 05 February 2020, 20:26:48 UTC | ENCD-5068-update-regex-pattern-for-IHEC-dbxref (#3123) | 05 February 2020, 20:26:48 UTC |
ea07258 | Idan Gabdank | 05 February 2020, 01:40:02 UTC | ENCD-4172 improved PublicationData embedding (#3130) | 05 February 2020, 01:40:02 UTC |