| ae7fe38 | Nate Coraor | 02 May 2023, 15:49:30 UTC | Update pulsar-galaxy-lib to 0.15.2 for test.galaxyproject.org | 02 May 2023, 15:49:30 UTC |
| e6d09a9 | Laila Los | 02 May 2023, 15:23:29 UTC | Merge pull request #15903 from ElectronicBlueberry/workflow-import-improvements Allow importing a workflow from a shared URL | 02 May 2023, 15:23:29 UTC |
| b500e9c | Marius van den Beek | 02 May 2023, 15:07:58 UTC | Merge pull request #15987 from jmchilton/badge_refactor Refactor badge parsing/serialization/typing for reuse. | 02 May 2023, 15:07:58 UTC |
| f43b76d | Marius van den Beek | 02 May 2023, 13:39:32 UTC | Merge pull request #15947 from assuntad23/14967/feat/build-list-for-all-seleected Add option to create list for all datasets in a history to dropdown | 02 May 2023, 13:39:32 UTC |
| f64a898 | Marius van den Beek | 02 May 2023, 10:40:41 UTC | Merge pull request #16023 from ElectronicBlueberry/fix-file-paste Fix pasting file fails if text starts with `file ` | 02 May 2023, 10:40:41 UTC |
| dfdab36 | Laila Los | 02 May 2023, 08:55:29 UTC | make uri_prefixes stricter | 02 May 2023, 08:55:29 UTC |
| 5d26ff3 | David López | 02 May 2023, 08:23:17 UTC | Merge pull request #16017 from martenson/grids-ref-minor minor tooltip and UI client changes | 02 May 2023, 08:23:17 UTC |
| 4e770c5 | Martin Cech | 28 April 2023, 18:32:04 UTC | minor tooltip and UI client changes | 28 April 2023, 18:32:04 UTC |
| 9c7f7a7 | David López | 28 April 2023, 09:31:12 UTC | Merge pull request #15995 from martenson/menu-items-titles remove inherited title from masthead dropdown items | 28 April 2023, 09:31:12 UTC |
| 8f8d008 | Laila Los | 28 April 2023, 08:43:51 UTC | Merge pull request #15994 from martenson/user-menu-reorg reorganize user menu for consistency | 28 April 2023, 08:43:51 UTC |
| de52de0 | Martin Cech | 28 April 2023, 02:30:10 UTC | update custom builds test navigation | 28 April 2023, 02:30:10 UTC |
| ae27add | Assunta DeSanto | 27 April 2023, 19:25:18 UTC | reusing existing code to start collection build, following DRY principles | 27 April 2023, 19:25:18 UTC |
| 1ef0d66 | John Davis | 27 April 2023, 17:34:43 UTC | Merge pull request #15956 from davelopez/23.0_fix_api_keys_deleted_column_nullable Fix nullable deleted column in API Keys table | 27 April 2023, 17:34:43 UTC |
| 45c50c2 | Dannon | 27 April 2023, 15:10:40 UTC | Merge pull request #16008 from hujambo-dunia/fix-toaster-onclick Fix for link pop-up window/toaster after Data Library to History import | 27 April 2023, 15:10:40 UTC |
| 65984d7 | David López | 27 April 2023, 14:09:52 UTC | Set server_default in the model definition This makes sure the default value is set when inserting new rows with or without using Sqlalchemy. Co-authored-by: Nicola Soranzo <nicola.soranzo@gmail.com> | 27 April 2023, 14:30:18 UTC |
| c3e5f0c | Dannon | 27 April 2023, 12:36:07 UTC | Update client/src/components/Libraries/LibraryFolder/TopToolbar/import-to-history/import-dataset.js Co-authored-by: Laila Los <44241786+ElectronicBlueberry@users.noreply.github.com> | 27 April 2023, 12:36:07 UTC |
| 4950310 | Dannon | 27 April 2023, 12:11:11 UTC | Merge pull request #15998 from minh-biocommons/citation-tools-export-message Export tool citations configurable message | 27 April 2023, 12:11:11 UTC |
| 995288c | mvdbeek | 27 April 2023, 09:13:25 UTC | Use config composable instead of provider | 27 April 2023, 09:21:30 UTC |
| a59e0b4 | Minh Vu | 23 April 2023, 09:09:35 UTC | refactored | 27 April 2023, 09:21:29 UTC |
| aecbe0c | Minh Vu | 17 April 2023, 04:46:54 UTC | Option to display a different message on the export citations tool page | 27 April 2023, 09:19:33 UTC |
| 5066f23 | davelopez | 19 April 2023, 16:51:22 UTC | Add db migration script APIKeys non-null deleted This makes sure the deleted column in the `api_keys` table has a valid boolean value from now on and sets any existing null value as deleted (True). | 27 April 2023, 09:12:49 UTC |
| 25222de | Marius van den Beek | 27 April 2023, 09:12:13 UTC | Merge pull request #16011 from ElectronicBlueberry/mock-fetcher-followup Mock fetcher followup | 27 April 2023, 09:12:13 UTC |
| 1bb4a8e | davelopez | 19 April 2023, 11:31:46 UTC | Set APIKeys.deleted non-nullable in model | 27 April 2023, 09:08:27 UTC |
| 92ab513 | Laila Los | 27 April 2023, 08:50:37 UTC | exclude ts mocks from webpack build | 27 April 2023, 08:50:37 UTC |
| 53b4dc7 | Laila Los | 27 April 2023, 08:49:55 UTC | relocate and rename mockFetcher files | 27 April 2023, 08:49:55 UTC |
| 09596fd | David López | 27 April 2023, 08:04:47 UTC | Merge pull request #16009 from jdavcs/dev_alter_col_helper Add alter_column migration utility | 27 April 2023, 08:04:47 UTC |
| d4cd816 | John Davis | 27 April 2023, 02:14:31 UTC | Add alter_column migration utility function | 27 April 2023, 02:14:31 UTC |
| 9260c82 | hujambo-dunia | 26 April 2023, 18:42:38 UTC | Fix for link pop-up window/toaster after Data Library to History import | 26 April 2023, 18:42:38 UTC |
| d65c95e | John Chilton | 26 April 2023, 18:30:27 UTC | Merge pull request #15992 from ElectronicBlueberry/mock-fechter Fetcher Mock utility | 26 April 2023, 18:30:27 UTC |
| dab53cd | hujambo-dunia | 26 April 2023, 17:43:58 UTC | Fix for missing Href to Composables pass-through component | 26 April 2023, 17:43:58 UTC |
| abee8b6 | Assunta DeSanto | 26 April 2023, 16:44:47 UTC | moving reset-selection out of hidden check | 26 April 2023, 16:44:47 UTC |
| 4e579b9 | Assunta DeSanto | 21 April 2023, 15:20:34 UTC | adding unit test for displaying collection building option | 26 April 2023, 16:43:48 UTC |
| b5ef8f2 | Assunta DeSanto | 20 April 2023, 14:03:25 UTC | running prettier | 26 April 2023, 16:43:48 UTC |
| e4dc022 | Assunta DeSanto | 20 April 2023, 13:57:19 UTC | responding to comments on PR, removing setting default filters because they are already included | 26 April 2023, 16:43:48 UTC |
| 23e0f7b | Assunta DeSanto | 19 April 2023, 17:45:45 UTC | moving query to standalone function in queries.js. adding user filter to query, using defaults for visible, deleted, purged | 26 April 2023, 16:43:48 UTC |
| f98319f | Assunta DeSanto | 18 April 2023, 01:25:59 UTC | todo to add user filters to query | 26 April 2023, 16:43:48 UTC |
| d248eb7 | Assunta DeSanto | 18 April 2023, 01:18:24 UTC | adding filtering on visible, deleted, and purged | 26 April 2023, 16:43:48 UTC |
| 462f71c | Assunta DeSanto | 17 April 2023, 15:51:38 UTC | adding option to create list for all datasets in a history to dropdown | 26 April 2023, 16:43:48 UTC |
| 0a47a7e | Dannon | 26 April 2023, 14:22:34 UTC | Merge pull request #15972 from wm75/fast-bam-chunks Improve display chunk generation for BAMs | 26 April 2023, 14:22:34 UTC |
| de488f1 | Marius van den Beek | 26 April 2023, 14:09:21 UTC | Merge pull request #15811 from jdavcs/dev_migrations_cleanup1 Fix revision scripts, run migrations in CI, add repair option, improve migrations utils | 26 April 2023, 14:09:21 UTC |
| 380d2b1 | John Davis | 13 April 2023, 23:18:43 UTC | Add help text for the --repair command | 26 April 2023, 12:53:35 UTC |
| 90e47b1 | John Davis | 13 April 2023, 22:52:00 UTC | Refactor, cleanup migration utils Factor out reduntant logic into template methods Add type hints, docstrings Misc. cleanup | 26 April 2023, 12:53:35 UTC |
| b528f63 | John Davis | 13 April 2023, 17:54:15 UTC | Implement --repair option for upgrade/downgrade WIP: Lots of redundant logic here. Needs refactoring. | 26 April 2023, 12:53:35 UTC |
| 12e1c81 | John Davis | 12 April 2023, 19:42:16 UTC | Fix bug in unit test: don't call downgrade w/o revision id | 26 April 2023, 12:53:35 UTC |
| c2ed568 | John Davis | 12 April 2023, 19:19:56 UTC | Apply transaction context manager to select revisions Wrap multiple sql statements in a transaction to ensure per-revision transactional control. | 26 April 2023, 12:53:35 UTC |
| bec3b1f | John Davis | 12 April 2023, 19:11:37 UTC | Add transaction context manager for sqlite migrations | 26 April 2023, 12:53:35 UTC |
| e453e5b | John Davis | 11 April 2023, 23:47:43 UTC | Fix revision d058: use util wrappers; rearrange ops Rearrange ops in downgrade block to mirror ops in upgrade block in reverse order: upgrade: - do A - do B downgrade: - undo B - undo A | 26 April 2023, 12:53:35 UTC |
| 5821cd8 | John Davis | 11 April 2023, 23:04:41 UTC | Move PRAGMA statements into context manager | 26 April 2023, 12:53:35 UTC |
| 1f795aa | John Davis | 11 April 2023, 21:18:21 UTC | Handle index add/drop in revision script We must explicitly drop the index if we are dropping the column on which it is defined using batch ops on sqlite. | 26 April 2023, 12:53:35 UTC |
| 893a9de | John Davis | 11 April 2023, 21:17:08 UTC | Wrap batch ops in pragma statement for sqlite See https://github.com/sqlalchemy/alembic/issues/1207 | 26 April 2023, 12:53:35 UTC |
| 0c913e8 | John Davis | 11 April 2023, 19:32:12 UTC | Drop index in model (dropped in migration d0583094c8cd) | 26 April 2023, 12:53:35 UTC |
| 84743c4 | John Davis | 14 March 2023, 19:18:37 UTC | Add `--repair` argument to upgrade/downgrade commands on db_dev script | 26 April 2023, 12:53:35 UTC |
| 3675e04 | John Davis | 15 March 2023, 00:40:18 UTC | Use wrappers in revision scripts; fail fast on conflicts | 26 April 2023, 12:53:35 UTC |
| 38ed091 | John Davis | 15 March 2023, 19:47:18 UTC | Add test for running database migrations | 26 April 2023, 12:53:35 UTC |
| a48ba5f | John Davis | 15 March 2023, 19:46:55 UTC | Add sqlite_factory fixture, make helper method public | 26 April 2023, 12:53:35 UTC |
| f0c2e43 | John Davis | 15 March 2023, 18:42:28 UTC | Add db migrate test to postgres workflow | 26 April 2023, 12:53:35 UTC |
| 4796634 | Dannon | 26 April 2023, 11:59:20 UTC | Merge pull request #15628 from ElectronicBlueberry/training-recommendations Add suggested Training material to Tool Form | 26 April 2023, 11:59:20 UTC |
| eb4cd72 | Marius van den Beek | 26 April 2023, 11:22:43 UTC | Merge pull request #15876 from jdavcs/dev_no_views Drop database views | 26 April 2023, 11:22:43 UTC |
| 2a3bcf3 | Laila Los | 26 April 2023, 09:54:04 UTC | import ExtrenalLink via absolute path Co-authored-by: Alireza Heidari <itisalirh@gmail.com> | 26 April 2023, 09:54:04 UTC |
| 2546060 | Martin Cech | 25 April 2023, 19:19:56 UTC | drop the custom builds from top menu it exists in the preferences sub menu | 25 April 2023, 19:19:56 UTC |
| a9f6c47 | Martin Cech | 25 April 2023, 18:21:52 UTC | adjust navigation for new menu text | 25 April 2023, 18:21:52 UTC |
| 70ba035 | Martin Cech | 25 April 2023, 17:30:13 UTC | remove title from dropdown items seemingly the title is inherited from parent b-nav-item-dropdown which 1. is not useful because all items have the same title 2. is not wanted (?) on dropdown items 3. causes weird behavior where if you hover on the dropdown menu it will change cursor together with showing title after a while | 25 April 2023, 17:30:13 UTC |
| 7225250 | Martin Cech | 25 April 2023, 17:27:36 UTC | update locale strings | 25 April 2023, 17:27:36 UTC |
| 6b577ae | Martin Cech | 25 April 2023, 17:16:25 UTC | unify logged in/signed in | 25 April 2023, 17:16:25 UTC |
| a1f837d | Martin Cech | 25 April 2023, 17:04:01 UTC | reorganize user menu for consistency | 25 April 2023, 17:04:01 UTC |
| 29e30ec | Laila Los | 25 April 2023, 14:06:27 UTC | add mock fetcher | 25 April 2023, 14:31:21 UTC |
| bc7d871 | Dannon | 25 April 2023, 12:51:45 UTC | Merge pull request #15926 from ahmedhamidawan/emit_related_filter_without_panel Emit filterText to HistoryPanel from historyStore | 25 April 2023, 12:51:45 UTC |
| 3c2ee1f | Dannon | 25 April 2023, 01:38:53 UTC | Merge pull request #15935 from guerler/flexpanel Convert legacy side panels to flex-compatible panels | 25 April 2023, 01:38:53 UTC |
| 40854fd | Dannon Baker | 24 April 2023, 22:13:09 UTC | Merge remote-tracking branch 'upstream/release_23.0' into dev | 24 April 2023, 22:13:09 UTC |
| e6757c2 | Dannon | 24 April 2023, 22:11:30 UTC | Merge pull request #15975 from ahmedhamidawan/history_filters_includes_related_bug [23.0] Fix History filters includes related filter bug | 24 April 2023, 22:11:30 UTC |
| bcb1973 | Dannon Baker | 24 April 2023, 21:08:26 UTC | Merge remote-tracking branch 'upstream/dev' into flexpanel | 24 April 2023, 21:08:26 UTC |
| cebcc54 | Ahmed Awan | 24 April 2023, 20:30:58 UTC | track history panel filterText in historyStore | 24 April 2023, 20:30:58 UTC |
| b5b9872 | Dannon | 24 April 2023, 19:53:06 UTC | Merge pull request #15988 from davelopez/fix_activity_bar_toggle Fix Activity Bar toggle reactivity | 24 April 2023, 19:53:06 UTC |
| 2c9de57 | Dannon | 24 April 2023, 19:52:11 UTC | Merge pull request #15980 from guerler/published_title Add text-break to wrap long published titles | 24 April 2023, 19:52:11 UTC |
| 0656f1e | Ahmed Awan | 24 April 2023, 19:32:26 UTC | use applyFilterText instead of setCurrentHistory in DatasetList | 24 April 2023, 19:32:26 UTC |
| e095db5 | Ahmed Awan | 24 April 2023, 19:31:17 UTC | include useHistoryStore import | 24 April 2023, 19:31:17 UTC |
| 0ccfb95 | Ahmed Awan | 24 April 2023, 18:50:07 UTC | apply related filter emit only to filterable panels | 24 April 2023, 19:22:31 UTC |
| 151c9ac | Ahmed Awan | 12 April 2023, 06:00:09 UTC | remove emit redundant emit from WorkflowInvocationDetails | 24 April 2023, 19:17:50 UTC |
| 8858928 | Ahmed Awan | 12 April 2023, 05:52:44 UTC | Emit Related filter to HistoryPanel from historyStore | 24 April 2023, 19:17:48 UTC |
| c6a73fc | Ahmed Awan | 11 April 2023, 16:44:21 UTC | Emit related filter to History Panel | 24 April 2023, 18:50:35 UTC |
| f4bf706 | Dannon | 24 April 2023, 16:50:49 UTC | Merge pull request #15108 from itisAliRH/pinia-history-store-migrate Migrate history store to pinia | 24 April 2023, 16:50:49 UTC |
| 82ff8c8 | davelopez | 24 April 2023, 16:43:19 UTC | Convert Analysis.vue to typescript | 24 April 2023, 16:43:19 UTC |
| f596873 | davelopez | 24 April 2023, 16:15:04 UTC | Rename toggledActivityBar to showActivityBar | 24 April 2023, 16:15:04 UTC |
| bccf527 | davelopez | 24 April 2023, 15:38:01 UTC | Fix Activity Bar toggle reactivity | 24 April 2023, 15:38:01 UTC |
| 3851551 | Martin Cech | 24 April 2023, 15:22:02 UTC | Merge pull request #15986 from ElectronicBlueberry/published-workflow-user-fix [23.0] Fix invalid link to "workflows by owner" | 24 April 2023, 15:22:02 UTC |
| 10a89a5 | Martin Cech | 24 April 2023, 15:20:21 UTC | Merge pull request #15985 from ElectronicBlueberry/webhooks-fix [23.0] Fix Webhooks not rendering | 24 April 2023, 15:20:21 UTC |
| 8792a77 | John Chilton | 24 April 2023, 14:01:59 UTC | Refactor badge parsing/serialization/typing for reuse. There are subtle differences between object stores, user object store instance models, and object store templates in the downstream "bring-your-own-object-store" branch so breaking this stuff out like this should allow for cleaner diffs and reuse. | 24 April 2023, 14:52:04 UTC |
| 2f6fc71 | John Chilton | 24 April 2023, 13:33:55 UTC | Spelling fix. | 24 April 2023, 13:33:55 UTC |
| 24e1eee | Laila Los | 24 April 2023, 11:34:38 UTC | use owner computed in publishedByUser | 24 April 2023, 11:34:38 UTC |
| 882aa42 | Laila Los | 24 April 2023, 11:05:13 UTC | remove non existent prototype functions | 24 April 2023, 11:05:13 UTC |
| f11e4fa | Enis Afgan | 24 April 2023, 03:09:16 UTC | Merge pull request #15979 from ksuderman/build-container-with-nodejs Build container with nodejs | 24 April 2023, 03:09:16 UTC |
| 8268719 | guerler | 22 April 2023, 07:10:08 UTC | Apply consistent naming to word wrap utility class, add white space normal utility | 22 April 2023, 07:10:08 UTC |
| ec0adae | guerler | 22 April 2023, 06:52:53 UTC | Add text-break to title in markdown pages | 22 April 2023, 06:52:53 UTC |
| 28e2ebd | guerler | 22 April 2023, 06:43:12 UTC | Add text-break to wrap long published titles | 22 April 2023, 06:43:12 UTC |
| cd0e7fe | Keith Suderman | 21 April 2023, 21:12:58 UTC | Fixed spaces | 21 April 2023, 21:12:58 UTC |
| ae3e9ad | Keith Suderman | 21 April 2023, 21:10:17 UTC | Include nodejs in the final Docker image for the expression tools | 21 April 2023, 21:10:17 UTC |
| 999162c | Wolfgang Maier | 21 April 2023, 07:12:23 UTC | Fix linting | 21 April 2023, 07:12:23 UTC |
| 221c1a2 | Ahmed Awan | 21 April 2023, 02:23:53 UTC | Fix history filters bug with related filter | 21 April 2023, 02:23:53 UTC |
| 8d4f434 | Wolfgang Maier | 20 April 2023, 21:57:57 UTC | Fix wrongly saved file | 20 April 2023, 21:57:57 UTC |
| 6c08780 | Wolfgang Maier | 20 April 2023, 21:41:59 UTC | Improve display chunk generation for BAMs The new version is faster even for lines containing multiple tabs and optimizes the no or one tag cases. It also fixes a subtle bug that would drop a line at chunk boundaries. | 20 April 2023, 21:41:59 UTC |
