| 525a8f8 | danielballan | 04 April 2017, 13:39:34 UTC | REL: v0.3.3 | 04 April 2017, 13:39:34 UTC |
| d0583e9 | danielballan | 03 April 2017, 17:49:14 UTC | CI: Add build for Python 3.6 and latest versions of deps | 04 April 2017, 13:31:08 UTC |
| 78a573d | Lukas Schrangl | 07 February 2017, 12:39:54 UTC | Replace deprecated `getmoduleinfo` by `getmodulename` `getmoduleinfo` has been deprecated since Python 3.3 and has been removed in Python 3.6. Replace it by `getmodulename`. | 03 April 2017, 17:46:16 UTC |
| c309b83 | danielballan | 19 August 2016, 17:14:55 UTC | REL: v0.3.2 | 19 August 2016, 17:14:55 UTC |
| 0efa337 | danielballan | 19 August 2016, 17:14:24 UTC | DOC: Add pre-reserved Zenodo DOI in prep for v0.3.2 release. | 19 August 2016, 17:14:24 UTC |
| 1b81b51 | Dan Allan | 18 August 2016, 15:14:35 UTC | Merge pull request #398 from caspervdw/fix-scipy-kdtree Scipy 0.18.0 bug workaround | 18 August 2016, 15:14:35 UTC |
| fa06966 | Casper van der Wel | 18 August 2016, 14:15:43 UTC | Typo in warning message | 18 August 2016, 14:15:43 UTC |
| 994d49a | Casper van der Wel | 18 August 2016, 14:13:51 UTC | FIX Workaround scipy 0.18.0 cKDTree bug | 18 August 2016, 14:13:51 UTC |
| cd734a6 | Casper van der Wel | 18 August 2016, 13:28:32 UTC | DOC Fix github links in 0.3.1 release notes | 18 August 2016, 13:28:32 UTC |
| 1355002 | Casper van der Wel | 21 July 2016, 18:21:55 UTC | Merge pull request #375 from caspervdw/zenodo DOC New zenodo badge and doc reference | 21 July 2016, 18:21:55 UTC |
| 4121fa4 | Dan Allan | 13 July 2016, 02:49:06 UTC | Merge pull request #382 from caspervdw/fix-numba-version FIX Numba version conditional | 13 July 2016, 02:49:06 UTC |
| a9ddd80 | Casper van der Wel | 12 July 2016, 20:21:34 UTC | DOC Wrong theta_entropy links in API reference | 12 July 2016, 20:21:34 UTC |
| dcbb339 | Casper van der Wel | 12 July 2016, 20:05:27 UTC | FIX Numba version conditional | 12 July 2016, 20:05:27 UTC |
| 51506b3 | Casper van der Wel | 11 July 2016, 17:19:33 UTC | REL v0.3.1rc2 | 11 July 2016, 17:19:33 UTC |
| 6580eaa | Dan Allan | 09 July 2016, 00:06:01 UTC | Merge pull request #380 from caspervdw/fix-refine Fixes before v0.3.1 | 09 July 2016, 00:06:01 UTC |
| 3890f80 | Casper van der Wel | 08 July 2016, 19:17:02 UTC | Merge pull request #3 from danielballan/fix-refine TST: Fix sorting in tests for pandas 0.13 | 08 July 2016, 19:17:02 UTC |
| 8ba7f5b | danielballan | 08 July 2016, 17:16:16 UTC | TST: Fix sorting in tests for pandas 0.13 | 08 July 2016, 17:16:16 UTC |
| 0cdf80b | Casper van der Wel | 06 July 2016, 21:09:38 UTC | CLN Remainder of old plotting API | 06 July 2016, 21:09:38 UTC |
| bd02b9b | Casper van der Wel | 06 July 2016, 21:09:17 UTC | FIX Subtract drift performance Subtract drift performance was very low. The dataframe needs to be sorted on 'frame' for better performance. As it is changed anyway, context managers are removed again. | 06 July 2016, 21:09:17 UTC |
| 973e9e4 | Casper van der Wel | 06 July 2016, 21:07:54 UTC | FIX Do not allow max_iterations=0 Because of the refine refactor in #377, one iteratation is the same as no iteration previously. Zero iterations is not possible, because the center of mass is then undefined. | 06 July 2016, 21:07:54 UTC |
| 926ea87 | Dan Allan | 06 July 2016, 14:53:39 UTC | Merge pull request #351 from caspervdw/fix-subtract-drift FIX Pandas indexing error in subtract_drift | 06 July 2016, 14:53:39 UTC |
| 1db5743 | Dan Allan | 06 July 2016, 14:53:07 UTC | Merge pull request #377 from caspervdw/refine-python FIX Major bugfix in python refinement | 06 July 2016, 14:53:07 UTC |
| bbbebad | Casper van der Wel | 29 June 2016, 21:39:53 UTC | TST Change test_ep tolerances again | 29 June 2016, 21:39:53 UTC |
| 97cbba8 | caspervdw | 23 June 2016, 07:58:41 UTC | TST Sharpen rms error tolerance | 23 June 2016, 07:58:41 UTC |
| 3f94319 | caspervdw | 23 June 2016, 07:46:37 UTC | REF Refine refactor Drop `break_thresh` because it is not used anymore. Add deprecation warning to `refine`, change API of `_refine` and numba codes. | 23 June 2016, 07:46:41 UTC |
| 8ac1f28 | caspervdw | 23 June 2016, 07:45:49 UTC | TST Add test for anisotropic 2D no characterize To test specific numba refine codes. | 23 June 2016, 07:46:41 UTC |
| 6b4ca71 | Casper van der Wel | 20 June 2016, 18:35:21 UTC | PERF In test_ep | 20 June 2016, 18:35:21 UTC |
| d4d6a93 | Casper van der Wel | 20 June 2016, 18:33:33 UTC | DOC Release notes v0.3.1 update | 20 June 2016, 18:33:33 UTC |
| f5aea3a | Casper van der Wel | 20 June 2016, 18:30:52 UTC | TST Sharpen tolerances of test_ep | 20 June 2016, 18:30:52 UTC |
| 435b594 | Casper van der Wel | 28 April 2016, 19:34:53 UTC | FIX Test of subtract_drift | 20 June 2016, 17:49:08 UTC |
| 4f0a581 | caspervdw | 06 March 2016, 12:40:41 UTC | FIX Pandas indexing error in subtract_drift By changing the indexing in #330, there was a bug introduced. This solves the indexing problem by temporarily converting the dataframe to a MultiIndex using a context manager. | 20 June 2016, 17:49:08 UTC |
| 45d0ceb | Casper van der Wel | 14 June 2016, 16:46:29 UTC | Merge pull request #374 from nkeim/fix-fnum-error-msg BUG: Fix formatting of linking error messages | 14 June 2016, 16:46:29 UTC |
| 629e2f0 | Casper van der Wel | 13 June 2016, 20:27:39 UTC | FIX Numpy warning Fixes warning at multiplication with np.bool array. | 13 June 2016, 20:27:39 UTC |
| 76a1e4f | Casper van der Wel | 13 June 2016, 20:16:46 UTC | FIX Major bugfix in python refinement In the pure python refinement code, the image slices were done with floats, which get floored to an int by numpy, instead of the intened round operation. | 13 June 2016, 20:16:46 UTC |
| 3440320 | Casper van der Wel | 07 June 2016, 18:53:40 UTC | DOC New zenodo badge and doc reference | 07 June 2016, 18:53:40 UTC |
| add5f4c | Dan Allan | 06 June 2016, 18:15:37 UTC | Merge pull request #368 from caspervdw/release-notes DOC Release notes for v0.3.1 | 06 June 2016, 18:15:37 UTC |
| 9e32393 | Nathan Keim | 06 June 2016, 00:35:12 UTC | Fix formatting of linking error messages. | 06 June 2016, 00:35:12 UTC |
| c2bd132 | Casper van der Wel | 03 June 2016, 15:57:49 UTC | Merge pull request #372 from nkeim/fix-predcition-segfault BUG: Fix dtype segfault in prediction | 03 June 2016, 15:57:49 UTC |
| a2b1811 | Nathan Keim | 27 May 2016, 17:56:57 UTC | BUG: Fix dtype segfault in prediction | 27 May 2016, 17:58:55 UTC |
| 1b20750 | Casper van der Wel | 16 May 2016, 14:36:01 UTC | DOC Add theta entropy functions to docs | 16 May 2016, 14:36:01 UTC |
| c6eba41 | Casper van der Wel | 16 May 2016, 14:29:22 UTC | API+DOC Move proximity to static.py Add msd, pair_correlation_2d and pair_correlation_3d to docs | 16 May 2016, 14:29:22 UTC |
| beea846 | Casper van der Wel | 16 May 2016, 14:21:35 UTC | DOC Release notes 0.3.1 | 16 May 2016, 14:21:35 UTC |
| e998176 | Thomas A Caswell | 14 May 2016, 22:50:40 UTC | Merge pull request #357 from caspervdw/plot-fixes FIX Plot fixes | 14 May 2016, 22:50:40 UTC |
| 3369fc0 | Dan Allan | 10 May 2016, 22:54:27 UTC | Merge pull request #366 from caspervdw/travis-doc-build BLD Forced doc update | 10 May 2016, 22:54:27 UTC |
| 7f28080 | Casper van der Wel | 06 May 2016, 14:16:38 UTC | BLD Copy docs when build is tagged | 06 May 2016, 14:16:38 UTC |
| 555b55a | Casper van der Wel | 06 May 2016, 13:48:24 UTC | BLD Forced doc update | 06 May 2016, 13:48:24 UTC |
| 6d5151f | Casper van der Wel | 06 May 2016, 12:34:23 UTC | Merge pull request #365 from caspervdw/travis-doc-build BLD Doc move instead of copy | 06 May 2016, 12:34:23 UTC |
| 1dad110 | Casper van der Wel | 06 May 2016, 12:32:05 UTC | BLD Doc move instead of copy | 06 May 2016, 12:32:05 UTC |
| 398b80a | Casper van der Wel | 06 May 2016, 11:49:12 UTC | Merge pull request #364 from caspervdw/travis-doc-build BLD Adjust paths in doc build | 06 May 2016, 11:49:12 UTC |
| b54e0b4 | Casper van der Wel | 06 May 2016, 11:42:51 UTC | DOC Add neat title names in toctree Necessary because of the diffent tutorial build ignores the ipynb titles | 06 May 2016, 11:42:51 UTC |
| c15a6ac | Casper van der Wel | 06 May 2016, 11:42:21 UTC | BLD Tutorial nbconvert now writes directly to html Use jupyter instead of deprecated ipython | 06 May 2016, 11:42:21 UTC |
| f540bff | Casper van der Wel | 06 May 2016, 11:41:18 UTC | BLD Revert docbuild to 3.5 | 06 May 2016, 11:41:18 UTC |
| d004465 | Casper van der Wel | 05 May 2016, 10:23:28 UTC | BLD Switch doc build to 2.7 build | 05 May 2016, 10:23:28 UTC |
| b594569 | Casper van der Wel | 05 May 2016, 10:11:42 UTC | BLD Add pandoc package to doc build | 05 May 2016, 10:11:42 UTC |
| 5ee045d | Casper van der Wel | 04 May 2016, 21:10:53 UTC | BLD Add nbconvert dependency for doc build | 04 May 2016, 21:10:53 UTC |
| 44a3b38 | Casper van der Wel | 04 May 2016, 20:55:21 UTC | BLD Adjust paths in doc build | 04 May 2016, 20:55:21 UTC |
| 0981f17 | Thomas A Caswell | 04 May 2016, 19:13:59 UTC | Merge pull request #363 from caspervdw/travis-doc-build BLD: Fix folders and notebook build | 04 May 2016, 19:13:59 UTC |
| b56b0ff | Casper van der Wel | 04 May 2016, 18:13:07 UTC | BLD Fix folders and notebook build | 04 May 2016, 18:13:07 UTC |
| e38c429 | Dan Allan | 03 May 2016, 23:22:14 UTC | Merge pull request #362 from caspervdw/travis-doc-build DOC Automatic doc build | 03 May 2016, 23:22:14 UTC |
| c6bac95 | Casper van der Wel | 29 April 2016, 21:33:56 UTC | BLD Add sphinx bootstrap theme | 29 April 2016, 21:33:56 UTC |
| f5e67c0 | Casper van der Wel | 29 April 2016, 21:11:23 UTC | DOC Automatic doc build Implementation the same as for pims | 29 April 2016, 21:11:23 UTC |
| 73111a2 | Casper van der Wel | 28 April 2016, 19:21:05 UTC | API Default behaviour for 3d/2d projections If ax is specified and 2d, 3d plotting raises ValueError If ax is specified and 3d, 2d plotting proceeds (with z=0 by default) If ax is not specified and plt.gca() 2d, 3d plotting creates new Figure If ax is not specified and plt.gca() 3d, 2d plotting proceeds | 28 April 2016, 19:21:05 UTC |
| cd5cb37 | Casper van der Wel | 28 April 2016, 18:56:50 UTC | FIX legend kwarg in make_ax decorator | 28 April 2016, 18:57:47 UTC |
| fe75002 | Casper van der Wel | 26 April 2016, 17:42:22 UTC | Merge pull request #359 from nkeim/linking-gaps-kdtree CLN: Moved empty-level check to wrap kdtree.query() | 26 April 2016, 17:42:22 UTC |
| c8ccc94 | Nathan Keim | 24 April 2016, 19:35:53 UTC | CLN: Moved empty-level check to wrap kdtree.query() | 24 April 2016, 19:57:29 UTC |
| f3660c5 | Nathan Keim | 24 April 2016, 19:56:25 UTC | Merge pull request #293 from caspervdw/linking-gaps FIX Gaps in frames are not ignored anymore | 24 April 2016, 19:56:25 UTC |
| 6e9b8e8 | Dan Allan | 04 April 2016, 14:18:40 UTC | Merge pull request #347 from caspervdw/test-pims-0.3.3 TST Pillow>=3.0.0, increase pims dependency | 04 April 2016, 14:18:40 UTC |
| b79a1ee | Casper van der Wel | 28 March 2016, 12:50:48 UTC | FIX Legend showing by default Fixes #342 | 28 March 2016, 13:00:22 UTC |
| 54fca93 | Casper van der Wel | 28 March 2016, 12:17:32 UTC | FIX Invert_yaxis double usage When `ax.invert_yaxis` is called twice, the axis will not be inverted. This commit solves that issue. (connected to #343) | 28 March 2016, 12:59:50 UTC |
| 6e8feea | Casper van der Wel | 28 March 2016, 11:30:39 UTC | TST Pillow==3.0, Increase pims dependency To solve issues with Pillow>=3.0.0, pims needs to be >= 0.3.3. Added tests for Pillow 2.1, 2.5.1, 2.9, 3.0 and latest. | 28 March 2016, 11:30:39 UTC |
| 5a984f4 | Casper van der Wel | 28 March 2016, 11:12:27 UTC | Merge pull request #356 from nkeim/fix-pandas-0180 BLD: Avoid buggy Pandas 0.18.0 | 28 March 2016, 11:12:27 UTC |
| a52903a | Nathan Keim | 27 March 2016, 23:17:39 UTC | BLD: Avoid buggy Pandas 0.18.0 | 27 March 2016, 23:17:39 UTC |
| b5df116 | Casper van der Wel | 09 March 2016, 16:06:47 UTC | Merge pull request #353 from caspervdw/fix-travis FIX Build issue with numpy 1.9.3 and scipy 0.16.0 | 09 March 2016, 16:06:47 UTC |
| aaa4aef | caspervdw | 08 March 2016, 19:05:55 UTC | FIX Build issue with numpy 1.9.3 and scipy 0.16.0 | 08 March 2016, 19:05:55 UTC |
| eda5140 | Casper van der Wel | 26 February 2016, 15:22:41 UTC | Merge pull request #336 from dwieker/master Pair Correlation | 26 February 2016, 15:22:41 UTC |
| 067a9a5 | Devin Wieker | 25 February 2016, 05:27:53 UTC | Merge pull request #6 from nkeim/master DOC: Minor edits to static.py docstrings, comments | 25 February 2016, 05:27:53 UTC |
| 1351183 | Nathan Keim | 20 February 2016, 18:11:30 UTC | DOC: Minor edits to static.py docstrings, comments | 20 February 2016, 18:11:30 UTC |
| 935392f | Devin Wieker | 19 February 2016, 07:01:31 UTC | resolved memory overflow error | 19 February 2016, 07:01:31 UTC |
| be9fb7e | Devin Wieker | 19 February 2016, 06:50:45 UTC | Clearer error messages | 19 February 2016, 06:50:45 UTC |
| 8d77335 | Devin Wieker | 19 February 2016, 06:39:35 UTC | Clearer error messages | 19 February 2016, 06:39:35 UTC |
| 4c2ab1c | caspervdw | 18 February 2016, 18:42:24 UTC | Clearer error messages | 18 February 2016, 18:42:24 UTC |
| a30251c | Devin Wieker | 17 February 2016, 04:38:38 UTC | reformatted lines to be less than 80 characters | 17 February 2016, 04:38:38 UTC |
| 829b1e8 | Devin Wieker | 17 February 2016, 04:32:03 UTC | added missing factor of 2 | 17 February 2016, 04:32:03 UTC |
| 3cd4fa5 | Devin Wieker | 17 February 2016, 04:30:02 UTC | Revert "removed handle_edge option" This reverts commit fe9efce5d364d81f1b911ebfae346b5cb888d3c6. Cannot delete "handle_edge" paramter; tests depend on it" | 17 February 2016, 04:30:02 UTC |
| fe9efce | Devin Wieker | 17 February 2016, 04:20:37 UTC | removed handle_edge option | 17 February 2016, 04:20:37 UTC |
| 92fa379 | Thomas A Caswell | 15 February 2016, 18:28:05 UTC | Merge pull request #345 from zoeith/master small compute_drift speed up | 15 February 2016, 18:28:05 UTC |
| 538f3ae | Devin Wieker | 13 February 2016, 18:12:56 UTC | Merge branch 'caspervdw-rdf-analytic' ~3x performance boost switching from numerical to analytical edge handling | 13 February 2016, 18:12:56 UTC |
| ddc8ba4 | caspervdw | 13 February 2016, 16:31:45 UTC | PERF Replace numeric edge handling with analytic functions Removes for loop over ckdtree.query and np.histogram. Measured 3x performance increase on 3D pair correlations. Adds tests for analytic edge handling functions. Makes code PEP8 compliant. (except for tests) | 13 February 2016, 16:32:56 UTC |
| 5234f63 | Devin Wieker | 13 February 2016, 04:10:21 UTC | changed function name | 13 February 2016, 04:10:21 UTC |
| 7d9c1bd | Devin Wieker | 13 February 2016, 04:04:08 UTC | changed function name | 13 February 2016, 04:04:08 UTC |
| 3fff89a | Devin Wieker | 11 February 2016, 21:36:04 UTC | changed unecessary > 0 check | 11 February 2016, 21:36:04 UTC |
| f7f6e96 | Devin Wieker | 11 February 2016, 21:34:59 UTC | changed max() to np.any() for speed increase | 11 February 2016, 21:34:59 UTC |
| 5f492c4 | Casper van der Wel | 11 February 2016, 17:41:37 UTC | Merge pull request #337 from hadim/msd_fft MSD computation with FFT | 11 February 2016, 17:41:37 UTC |
| 323709d | zoeith | 04 February 2016, 16:49:19 UTC | pep8 fixes | 04 February 2016, 16:49:19 UTC |
| 8590a6d | zoeith | 03 February 2016, 16:39:26 UTC | small compute_drift speed up | 03 February 2016, 16:39:26 UTC |
| 9dc2a0e | caspervdw | 22 January 2016, 19:59:15 UTC | Update minimum pandas dependency to 0.13 | 22 January 2016, 19:59:15 UTC |
| eb648fd | caspervdw | 16 January 2016, 15:58:10 UTC | FIX Make msd outputs exactly as before | 16 January 2016, 15:58:10 UTC |
| 5fb1da7 | caspervdw | 16 January 2016, 14:45:09 UTC | DOC Release notes | 16 January 2016, 14:45:09 UTC |
| 48f5ce0 | caspervdw | 16 January 2016, 14:35:51 UTC | FIX Mutable default values | 16 January 2016, 14:35:51 UTC |
| c3a6ab4 | caspervdw | 16 January 2016, 14:28:28 UTC | TST Pandas 0.12 compatability in test emsd gaps | 16 January 2016, 14:28:28 UTC |
