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https://github.com/ENCODE-DCC/encoded
17 March 2024, 18:08:03 UTC
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Revision Author Date Message Commit Date
869b258 Forrest Tanaka 23 February 2016, 00:01:06 UTC Continuing tests 23 February 2016, 00:01:06 UTC
876e055 Forrest Tanaka 22 February 2016, 16:22:05 UTC Merge branch 'master' of https://github.com/ENCODE-DCC/encoded into 3295-hierarchical-facets 22 February 2016, 16:22:05 UTC
fe74c09 Ben Hitz 19 February 2016, 00:17:49 UTC Merge pull request #1178 from ENCODE-DCC/3717-non-admin-page 3717 non admin page 19 February 2016, 00:17:49 UTC
9a63a82 Laurence Rowe 18 February 2016, 23:15:59 UTC Fix user permissions. Ensure user can edit own object but cannot post new users. Allow listing of user collection since we allow search. 18 February 2016, 23:15:59 UTC
8d200eb Laurence Rowe 18 February 2016, 22:51:46 UTC Simplify access_key, we only use status current and delted. 18 February 2016, 22:54:54 UTC
0224915 Laurence Rowe 18 February 2016, 22:39:55 UTC Remove unused access-key disable-secret. 18 February 2016, 22:39:55 UTC
c73cca2 Laurence Rowe 18 February 2016, 22:16:56 UTC Whitespace 18 February 2016, 22:16:56 UTC
8046b92 Laurence Rowe 18 February 2016, 22:09:06 UTC Merge remote-tracking branch 'origin/master' into 3717-non-admin-page 18 February 2016, 22:09:06 UTC
f46a8d6 Ben Hitz 18 February 2016, 21:50:06 UTC Merge pull request #1177 from ENCODE-DCC/snowfort-rename contentbase -> snowfort ... merging 18 February 2016, 21:50:06 UTC
29703f0 Ben Hitz 18 February 2016, 21:13:45 UTC Merge pull request #1173 from ENCODE-DCC/3646-text-addition 3646 text addition 18 February 2016, 21:13:45 UTC
7f61183 Ben Hitz 18 February 2016, 21:13:12 UTC Merge pull request #1176 from ENCODE-DCC/408-reverse-venkat use updated OBI 18 February 2016, 21:13:12 UTC
a4ad703 Ben Hitz 18 February 2016, 21:12:32 UTC use updated OBI 18 February 2016, 21:12:32 UTC
9cf9dab Laurence Rowe 18 February 2016, 21:10:42 UTC contentbase -> snowfort 18 February 2016, 21:10:42 UTC
eaf2ca8 Ben Hitz 18 February 2016, 20:58:34 UTC Merge pull request #1174 from ENCODE-DCC/3328-doc-keys 3328 Fix React key warnings 18 February 2016, 20:58:34 UTC
ad9bc22 Ben Hitz 18 February 2016, 19:59:36 UTC Merge pull request #1175 from ENCODE-DCC/etag-all-propsheets Make etag record tid of all propsheets. 18 February 2016, 19:59:36 UTC
37acf3b Forrest Tanaka 18 February 2016, 19:43:24 UTC Fix React key errors 18 February 2016, 19:43:24 UTC
687f975 Ben Hitz 18 February 2016, 18:54:20 UTC Merge pull request #1166 from ENCODE-DCC/3721-annotations Update annotation.json 18 February 2016, 18:54:20 UTC
31c37a2 Ben Hitz 18 February 2016, 18:44:52 UTC add a test that I probably don't need 18 February 2016, 18:44:52 UTC
5a9b2d8 Forrest Tanaka 18 February 2016, 18:25:15 UTC Merge branch 'master' of https://github.com/ENCODE-DCC/encoded into 3295-hierarchical-facets 18 February 2016, 18:25:15 UTC
fc8dd64 Forrest Tanaka 18 February 2016, 18:25:06 UTC Experiments 18 February 2016, 18:25:06 UTC
db69d7d Idan Gabdank 18 February 2016, 18:23:01 UTC added missing space to the audit and one test 18 February 2016, 18:23:01 UTC
00d82ea Idan Gabdank 18 February 2016, 18:22:16 UTC Merge branch 'master' into 3646-text-addition 18 February 2016, 18:22:16 UTC
671c627 Idan Gabdank 18 February 2016, 17:14:28 UTC edited the wording even further 18 February 2016, 17:14:28 UTC
cbfb753 Ben Hitz 18 February 2016, 17:04:45 UTC Merge pull request #1172 from ENCODE-DCC/3328-more-docs 3328 treatments and antibody characterizations 18 February 2016, 17:04:45 UTC
3da77e2 Ben Hitz 18 February 2016, 17:04:25 UTC Merge pull request #1171 from ENCODE-DCC/3605-antibody-detail 3605 antibody detail 18 February 2016, 17:04:25 UTC
db4c659 Ben Hitz 18 February 2016, 17:03:34 UTC Merge pull request #1170 from ENCODE-DCC/3724-avoid-schema-recursion don't show more than one level of children objects on forms 18 February 2016, 17:03:34 UTC
eac4c1a Idan Gabdank 18 February 2016, 16:46:19 UTC Merge branch 'master' into 3646-text-addition 18 February 2016, 16:46:19 UTC
7f7071f Idan Gabdank 18 February 2016, 16:46:15 UTC rewording the audit message to include ENCODE2 standards 18 February 2016, 16:46:15 UTC
4c5c9ce Forrest Tanaka 18 February 2016, 16:01:31 UTC Merge branch 'master' of https://github.com/ENCODE-DCC/encoded into 3328-more-docs 18 February 2016, 16:01:31 UTC
5dfe790 David Glick 18 February 2016, 06:02:31 UTC don't show more than one level of children objects on forms 18 February 2016, 06:02:31 UTC
9c69b43 Ben Hitz 18 February 2016, 05:48:53 UTC add user tests 18 February 2016, 05:48:53 UTC
f85ff19 Ben Hitz 18 February 2016, 05:44:53 UTC access key tests pass 18 February 2016, 05:44:53 UTC
45fbacf Ben Hitz 18 February 2016, 05:14:09 UTC Merge pull request #1169 from ENCODE-DCC/408-reverse-venkat 408 reverse venkat 18 February 2016, 05:14:09 UTC
a51cfc7 Laurence Rowe 18 February 2016, 02:57:45 UTC Make etag record tid of all propsheets. 18 February 2016, 02:57:45 UTC
95be90a Ben Hitz 18 February 2016, 01:44:08 UTC Merge remote-tracking branch 'origin/master' into 3717-non-admin-page 18 February 2016, 01:44:08 UTC
73d4c94 Ben Hitz 18 February 2016, 01:31:06 UTC Merge pull request #1168 from ENCODE-DCC/3577-fix-report-id fix @id of report view 18 February 2016, 01:31:06 UTC
cd64188 Ben Hitz 18 February 2016, 01:30:47 UTC Merge pull request #1167 from ENCODE-DCC/3723-encyclopedia-version Update annotation.json 18 February 2016, 01:30:47 UTC
e506d25 Ben Hitz 18 February 2016, 01:29:59 UTC Merge pull request #1165 from ENCODE-DCC/3709-xcor-plot 3709 xcor plot 18 February 2016, 01:29:59 UTC
8c9be60 Forrest Tanaka 17 February 2016, 23:16:35 UTC Bring back detailed treatments 17 February 2016, 23:16:35 UTC
9a32f87 estherc 17 February 2016, 22:15:41 UTC Merge branch 'master' into 3605-antibody-detail 17 February 2016, 22:15:41 UTC
7da76e0 estherc 17 February 2016, 20:34:32 UTC Fix exempt cell types in lot_reviews for non-histones 17 February 2016, 20:34:32 UTC
8e9dfff estherc 17 February 2016, 19:12:41 UTC Fix exempt cell types in lot_reviews for non-histones 17 February 2016, 19:12:41 UTC
2281d51 David Glick 17 February 2016, 17:30:53 UTC fix @id of report view 17 February 2016, 17:30:53 UTC
18b9be6 Forrest Tanaka 17 February 2016, 17:08:38 UTC Bring back antibody statuses …in antibody characterization panels 17 February 2016, 17:08:38 UTC
cffb38a Forrest Tanaka 17 February 2016, 06:01:24 UTC Implement Project subfacets 17 February 2016, 06:01:24 UTC
e5a1f81 Laurence Rowe 17 February 2016, 04:41:10 UTC Make it clear which acls are for items and which for collections. 17 February 2016, 04:41:10 UTC
9cb83b7 Laurence Rowe 17 February 2016, 04:39:12 UTC Need to ensure INDEXER and EMBED are allowed to view. 17 February 2016, 04:39:12 UTC
f8764ec Laurence Rowe 17 February 2016, 04:28:28 UTC Remove stray check for forms permission 17 February 2016, 04:28:28 UTC
50bf673 Laurence Rowe 17 February 2016, 04:27:40 UTC All item acl sets need to deny view,edit. 17 February 2016, 04:27:40 UTC
63a39b5 Ben Hitz 17 February 2016, 04:05:42 UTC wip 17 February 2016, 04:05:42 UTC
6d699dc Ben Hitz 17 February 2016, 01:48:46 UTC break all the tests 17 February 2016, 01:48:46 UTC
8b1e2a4 Ben Hitz 17 February 2016, 01:20:49 UTC give submitted_by to pages; allow owners to edit pages 17 February 2016, 01:20:49 UTC
53b5c32 Forrest Tanaka 17 February 2016, 00:08:51 UTC Retitle antibody characterization panel Was “Documents” — now “Characterizations. 17 February 2016, 00:08:51 UTC
3ce4732 Forrest Tanaka 16 February 2016, 23:00:12 UTC Treatment sources The “Treatments” line in the experiment summary panel was only getting treatments from the libraries. It now combines those with any from the biosamples. 16 February 2016, 23:00:12 UTC
8074ad7 Forrest Tanaka 16 February 2016, 21:15:27 UTC In progress Implementing Project=>RFA 16 February 2016, 21:15:27 UTC
e695606 Forrest Tanaka 16 February 2016, 17:27:40 UTC Merge branch '3295-hierarchical-facets' of https://github.com/ENCODE-DCC/encoded into 3295-hierarchical-facets 16 February 2016, 17:27:40 UTC
cbaaf1b Forrest Tanaka 16 February 2016, 17:08:36 UTC Merge remote-tracking branch 'origin/master' into 3295-hierarchical-facets 16 February 2016, 17:08:36 UTC
354dafb Cricket Alicia Sloan 13 February 2016, 15:16:26 UTC Update annotation.json 13 February 2016, 15:16:26 UTC
d8551bc Cricket Alicia Sloan 13 February 2016, 15:01:55 UTC Update annotation.json My attempt. I have made the new ones plural. We will have to have an upgrade to make the older ones plural. I think that having this part in release 38 will help DAC move forward. 13 February 2016, 15:01:55 UTC
0f8253d Ben Hitz 13 February 2016, 01:49:59 UTC re-venkat assays 13 February 2016, 01:49:59 UTC
4cc03d9 Ben Hitz 13 February 2016, 01:28:16 UTC patch buildout 13 February 2016, 01:28:16 UTC
a531607 Ben Hitz 13 February 2016, 00:34:42 UTC remove has_part and acheives_planned_objective from slims 13 February 2016, 00:34:42 UTC
ee34744 Forrest Tanaka 12 February 2016, 23:41:12 UTC Basically working. 12 February 2016, 23:41:12 UTC
02703de J. Seth Strattan 12 February 2016, 22:20:12 UTC Be consistent with other QC objects 12 February 2016, 22:20:12 UTC
c7ded93 J. Seth Strattan 12 February 2016, 22:19:58 UTC Cross-correlation plot loading and insert 12 February 2016, 22:19:58 UTC
d4936d7 Ben Hitz 12 February 2016, 19:41:07 UTC Merge pull request #1161 from ENCODE-DCC/3590-dataset-trackhubs 3590 dataset trackhubs 12 February 2016, 19:41:07 UTC
8a5d7f5 Ben Hitz 12 February 2016, 19:40:56 UTC Merge pull request #1160 from ENCODE-DCC/408-obi-slims2 408 obi slims2 12 February 2016, 19:40:56 UTC
fa3fdaf Ben Hitz 12 February 2016, 19:27:18 UTC Merge pull request #1163 from ENCODE-DCC/3577-report report view 12 February 2016, 19:27:18 UTC
45bac15 Ben Hitz 12 February 2016, 19:08:03 UTC Merge pull request #1162 from ENCODE-DCC/3647-peak-indexer 3647 peak indexer Region search related changes 12 February 2016, 19:08:03 UTC
21f7aaa David Glick 12 February 2016, 18:18:31 UTC add link from matrix view to report view 12 February 2016, 18:18:31 UTC
36487ac David Glick 08 February 2016, 05:24:57 UTC Report view improvements - Make all properties available - Default to same selected columns as the ones the server sends - Handle traversing lists - Fix issue with displaying batch start/end after filtering 12 February 2016, 18:06:06 UTC
716afcc David Glick 31 January 2016, 22:14:12 UTC add basic "load more" pagination 12 February 2016, 18:06:06 UTC
877d36b David Glick 31 January 2016, 05:20:58 UTC fixes 12 February 2016, 18:06:06 UTC
cadcff1 David Glick 31 January 2016, 02:09:38 UTC show sort order 12 February 2016, 18:06:06 UTC
99d6c28 David Glick 31 January 2016, 01:53:43 UTC fix toggling columns, column labels 12 February 2016, 18:06:05 UTC
6bc5b8d David Glick 31 January 2016, 00:52:00 UTC fix toggling columns, column labels 12 February 2016, 18:06:05 UTC
f39c403 David Glick 30 January 2016, 23:18:38 UTC checkpoint 12 February 2016, 18:06:05 UTC
f88eb11 Ulugbek Baymuradov 12 February 2016, 18:05:23 UTC Merge branch 'master' into 3647-peak-indexer 12 February 2016, 18:05:23 UTC
ced634d Ben Hitz 12 February 2016, 17:07:10 UTC Merge pull request #1159 from ENCODE-DCC/tagAligns Update check_files.py 12 February 2016, 17:07:10 UTC
8b868b3 Cricket Alicia Sloan 12 February 2016, 17:03:50 UTC Update check_files.py This is breaking all the roadmap submissions 12 February 2016, 17:03:50 UTC
06f3346 Forrest Tanaka 12 February 2016, 01:03:29 UTC In progress 12 February 2016, 01:03:29 UTC
3247f12 Forrest Tanaka 12 February 2016, 00:26:28 UTC hrefs in subfacets 12 February 2016, 00:26:28 UTC
ca0a285 Ulugbek Baymuradov 11 February 2016, 22:34:22 UTC fake commit 11 February 2016, 22:34:22 UTC
9e0b62b Forrest Tanaka 11 February 2016, 22:24:13 UTC Merge branch 'master' of https://github.com/ENCODE-DCC/encoded into 3295-hierarchical-facets 11 February 2016, 22:24:13 UTC
2f28977 Forrest Tanaka 11 February 2016, 22:23:56 UTC Kind of works Shows proper hierarchy. That is all. 11 February 2016, 22:23:56 UTC
7d55886 Ulugbek Baymuradov 11 February 2016, 22:10:28 UTC fix typo and remove debugging logs 11 February 2016, 22:10:28 UTC
cb07674 Ben Hitz 11 February 2016, 22:08:08 UTC set up series/fileset/experiment trackHub tests 11 February 2016, 22:08:08 UTC
895de10 Ulugbek Baymuradov 11 February 2016, 22:01:37 UTC keep annotations in local es instance for now 11 February 2016, 22:01:37 UTC
1e2999d Ulugbek Baymuradov 11 February 2016, 21:21:11 UTC annotations should live as an index along with peak index on ES only instance 11 February 2016, 21:21:11 UTC
e4a98c8 Ulugbek Baymuradov 11 February 2016, 20:03:44 UTC separate peak index ES instances for production and test/demo 11 February 2016, 20:03:44 UTC
b4055e9 Ben Hitz 11 February 2016, 18:11:28 UTC Merge remote-tracking branch 'origin/master' into 3590-dataset-trackhubs 11 February 2016, 18:11:28 UTC
fd80a55 Ben Hitz 11 February 2016, 18:09:05 UTC Merge pull request #1158 from ENCODE-DCC/3236-biosample-inheritance-3 3236 / 3325 / 3328 Page overhauls and biosample part_of 11 February 2016, 18:09:05 UTC
ce3b7ec Ben Hitz 11 February 2016, 18:07:07 UTC Merge remote-tracking branch 'origin/master' into 408-obi-slims2 11 February 2016, 18:07:07 UTC
5b45fe3 Ben Hitz 11 February 2016, 18:04:06 UTC update ontology download 11 February 2016, 18:04:06 UTC
baa15eb Ben Hitz 11 February 2016, 18:03:46 UTC assign Hi-C to correct slim 11 February 2016, 18:03:46 UTC
5c230e1 Ben Hitz 11 February 2016, 17:44:05 UTC Merge pull request #1156 from ENCODE-DCC/3605-antibody-detail 3605 antibody detail FYI, The usual pythonic way to do this: target_organisms = dict() antibody_targets = list() tmp = list() is tmp = [] target_organisms = {} I am merging anyway because life is short. 11 February 2016, 17:44:05 UTC
e92452e Ben Hitz 11 February 2016, 17:41:58 UTC Merge pull request #1155 from ENCODE-DCC/s3-url-old-files Show s3 location info for files originally submitted to EDW. 11 February 2016, 17:41:58 UTC
0ad2356 Ben Hitz 11 February 2016, 17:19:32 UTC fix final typos 11 February 2016, 17:19:32 UTC
10ae3cd Forrest Tanaka 11 February 2016, 16:09:43 UTC Merge branch '3328-docs' into 3236-biosample-inheritance-3 11 February 2016, 16:09:43 UTC
e62bab4 Forrest Tanaka 11 February 2016, 15:57:59 UTC Change title Change “Type” to “Biosample type” in the experiment summary panel 11 February 2016, 15:57:59 UTC
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