| 591066f | Julien Vitay | 25 September 2014, 11:27:09 UTC | Fixed recording of global variables of a population. | 25 September 2014, 11:27:09 UTC |
| 01f28cf | Julien Vitay | 25 September 2014, 10:19:49 UTC | The language="c++" option to cythonize does not work with cython 0.21 anymore. Supressing it does not interfere with cython 0.20.1 or 0.19. | 25 September 2014, 10:19:49 UTC |
| da14271 | Julien Vitay | 25 September 2014, 09:47:31 UTC | .pxd files were not installed. | 25 September 2014, 09:47:31 UTC |
| 99b5506 | Julien Vitay | 18 August 2014, 15:14:24 UTC | Restored the example with AEIF neurons. | 18 August 2014, 15:14:24 UTC |
| 1cd2b6b | Julien Vitay | 18 August 2014, 15:11:03 UTC | Added the EIF network in examples. | 18 August 2014, 15:11:03 UTC |
| cbf03fe | Helge Dinkelbach | 22 July 2014, 06:39:02 UTC | Merge branch 'develop' of https://bitbucket.org/annarchy/annarchy-4.0 into develop | 22 July 2014, 06:39:02 UTC |
| 22a7929 | Helge Dinkelbach | 22 July 2014, 06:28:45 UTC | several changes on profiling extension | 22 July 2014, 06:38:26 UTC |
| 22c1a6c | Helge Dinkelbach | 22 July 2014, 06:28:45 UTC | several changes on profiling extension | 22 July 2014, 06:28:45 UTC |
| 009382b | Julien Vitay | 19 July 2014, 10:10:23 UTC | Disabled inv_rank in the dendrite, not needed anymore. | 19 July 2014, 10:10:23 UTC |
| fdd0d36 | Julien Vitay | 18 July 2014, 15:01:58 UTC | Fixed the delays of rate-coded networks. | 18 July 2014, 15:01:58 UTC |
| d612ae2 | Julien Vitay | 18 July 2014, 12:21:29 UTC | Merge branch 'new_CSR' into develop | 18 July 2014, 12:21:29 UTC |
| 159f541 | Julien Vitay | 18 July 2014, 12:14:06 UTC | No need to take delays into account when they are 1! | 18 July 2014, 12:14:06 UTC |
| e679962 | Julien Vitay | 18 July 2014, 11:36:54 UTC | Fixed rounding of delays. | 18 July 2014, 11:36:54 UTC |
| 7bb7f25 | Julien Vitay | 18 July 2014, 09:53:35 UTC | Fixed bug in transmitting spikes. Each dendrite summed over ALL spikes of the pre-population, not the ones which are actually connected!!! | 18 July 2014, 09:53:35 UTC |
| eae612f | Julien Vitay | 18 July 2014, 06:34:32 UTC | Restored the python add() method of CSR. | 18 July 2014, 06:34:32 UTC |
| 8e1d18f | Helge Dinkelbach | 18 July 2014, 05:49:22 UTC | Profile: added remove_outlier parameter. | 18 July 2014, 05:50:19 UTC |
| 4071350 | Julien Vitay | 17 July 2014, 21:29:51 UTC | Supressed the old addDendrite method. | 17 July 2014, 21:29:51 UTC |
| c6ce4ee | Julien Vitay | 17 July 2014, 21:08:26 UTC | The one_to_one connector was bugged... The CSR object is now totally changed. AEIF still does not work.... | 17 July 2014, 21:08:26 UTC |
| 3321139 | Helge Dinkelbach | 17 July 2014, 16:26:43 UTC | Profile: improved methods statistical analysis of recorded data. | 17 July 2014, 16:26:43 UTC |
| 7c0e711 | Julien Vitay | 17 July 2014, 11:35:56 UTC | Merge branch 'propagate_2' into new_CSR Conflicts: ANNarchy/generator/dendrite/TemplatesSpiking.py | 17 July 2014, 11:35:56 UTC |
| f3867e4 | Julien Vitay | 17 July 2014, 11:33:34 UTC | Conitnued modifying CSR. | 17 July 2014, 11:33:34 UTC |
| 75f071d | Helge Dinkelbach | 17 July 2014, 09:49:09 UTC | fixed stupid bug ... | 17 July 2014, 09:49:09 UTC |
| f615f33 | Julien Vitay | 17 July 2014, 09:33:26 UTC | Started rebuilding CSR | 17 July 2014, 09:33:26 UTC |
| 2352a3a | Helge Dinkelbach | 17 July 2014, 08:58:59 UTC | Bugfix: delayed spike events. | 17 July 2014, 08:58:59 UTC |
| b7742c0 | Julien Vitay | 16 July 2014, 09:39:53 UTC | Fixed recording of variables for populations. | 16 July 2014, 09:39:53 UTC |
| 65f13ab | Helge Dinkelbach | 16 July 2014, 06:02:39 UTC | Bugfix: added missing inv_rank_ on psp and learning. | 16 July 2014, 06:02:39 UTC |
| bfafcbb | Helge Dinkelbach | 15 July 2014, 13:27:48 UTC | experiments with aeif | 15 July 2014, 13:27:48 UTC |
| ba9dab1 | Helge Dinkelbach | 15 July 2014, 12:34:31 UTC | removed reset_ changed propagation mechanism | 15 July 2014, 12:34:31 UTC |
| fdccf81 | Julien Vitay | 15 July 2014, 09:13:19 UTC | Version of the AEIF network which has a problem... | 15 July 2014, 09:13:19 UTC |
| 820d275 | Julien Vitay | 15 July 2014, 08:02:21 UTC | Modified one-to-one in order to shift ranks when the two populations have the same size. | 15 July 2014, 08:02:21 UTC |
| 0f42311 | Julien Vitay | 14 July 2014, 20:44:57 UTC | Removed recording in AEIFNetwork.py | 14 July 2014, 20:44:57 UTC |
| 5a28858 | Julien Vitay | 14 July 2014, 20:39:02 UTC | Added AEIF neuron. Fixed bug for spiking networks when non all_to_all patterns are used. | 14 July 2014, 20:39:02 UTC |
| 611033b | Julien Vitay | 14 July 2014, 10:17:06 UTC | Added HH neuron model | 14 July 2014, 10:17:06 UTC |
| 7ea9c01 | Julien Vitay | 11 July 2014, 22:01:13 UTC | Added two examples of the pyNN documentation. | 11 July 2014, 22:01:13 UTC |
| 6fffa89 | Julien Vitay | 11 July 2014, 21:02:23 UTC | Izhikevich has no tau_refrac parameter. | 11 July 2014, 21:02:23 UTC |
| 20f1692 | Julien Vitay | 11 July 2014, 20:29:42 UTC | Added several pyNN default objects: * Izhikevich * IF_curr_exp * IF_cond_exp * IF_curr_alpha * IF_cond_alpha * SpikeSourceArray | 11 July 2014, 20:29:42 UTC |
| 4472a5f | Julien Vitay | 09 July 2014, 08:17:22 UTC | doc: adapted the doc no Izhikevich example. | 09 July 2014, 08:17:22 UTC |
| 8055767 | Julien Vitay | 09 July 2014, 08:08:48 UTC | Added Izhikevich as a standard neuron. | 09 July 2014, 08:08:48 UTC |
| cf919e4 | Julien Vitay | 08 July 2014, 15:07:55 UTC | Created Neuron and Synapse classes, which gather Rate* and Spike*. This simplifies the definition of the network. The examples and documentation are changed accordingly. | 08 July 2014, 15:07:55 UTC |
| fc8320c | Julien Vitay | 07 July 2014, 14:28:43 UTC | Started version 4.2.4. | 07 July 2014, 14:28:43 UTC |
| d6c1bb0 | Julien Vitay | 07 July 2014, 14:26:03 UTC | Added the Hodgkin-Huxley example. | 07 July 2014, 14:26:03 UTC |
| 1f6bae2 | Julien Vitay | 07 July 2014, 14:12:51 UTC | Cleaned the setup script. | 07 July 2014, 14:12:51 UTC |
| c957e6a | Julien Vitay | 06 July 2014, 20:24:02 UTC | doc: documented the numerical methods | 06 July 2014, 20:24:02 UTC |
| 5098006 | Julien Vitay | 06 July 2014, 17:19:11 UTC | The midpoint method now solves systems of equations. | 06 July 2014, 17:19:11 UTC |
| 8a1361c | Julien Vitay | 03 July 2014, 15:55:07 UTC | Allowed spike conditions to depend on several variables (important for HH). | 03 July 2014, 15:55:07 UTC |
| 3889491 | Julien Vitay | 02 July 2014, 16:10:31 UTC | Added possibility to define globally the numerical method | 02 July 2014, 16:10:31 UTC |
| cd74bc9 | Julien Vitay | 02 July 2014, 13:32:32 UTC | Avoid crash when a Projection is created but not connected. | 02 July 2014, 13:32:32 UTC |
| d235048 | Julien Vitay | 01 July 2014, 16:34:13 UTC | Added mid-point method for discretization. Works only for single equations. | 01 July 2014, 16:34:13 UTC |
| c8ac302 | Julien Vitay | 25 June 2014, 09:13:54 UTC | Started version 4.2.3 | 25 June 2014, 09:13:54 UTC |
| 28e1692 | Julien Vitay | 25 June 2014, 09:00:39 UTC | Added simplification of explicit equations. | 25 June 2014, 09:00:39 UTC |
| be77642 | Julien Vitay | 24 June 2014, 13:00:37 UTC | Some distributions do not have the Numpy headers at a standard location. | 24 June 2014, 13:00:37 UTC |
| def5851 | Julien Vitay | 24 June 2014, 09:28:58 UTC | doc: documented unless_refractory | 24 June 2014, 09:28:58 UTC |
| 5eaa872 | Julien Vitay | 24 June 2014, 09:18:48 UTC | Fixed behavior of refractory period. ADded the unless-Refractory keyword. | 24 June 2014, 09:18:48 UTC |
| 97ab642 | Julien Vitay | 23 June 2014, 19:29:40 UTC | Network time is also reset. | 23 June 2014, 19:29:40 UTC |
| 9634291 | Julien Vitay | 23 June 2014, 19:25:01 UTC | reset() now completely resets the parameters and variables to the state before compile(). | 23 June 2014, 19:25:01 UTC |
| f592571 | Julien Vitay | 23 June 2014, 18:52:20 UTC | Tried removing the initialization of values. Maybe too fast... | 23 June 2014, 18:52:20 UTC |
| 970988e | Julien Vitay | 23 June 2014, 16:10:50 UTC | The values of all parameters and variables are now directly transferred to C++ at compilation time. The classes default to false, 0 or 0.0 for the initial values. This saves up some recompilation time and will allow a better reset. | 23 June 2014, 16:10:50 UTC |
| 1b0817f | Julien Vitay | 23 June 2014, 12:11:57 UTC | Support for implicit Euler on systems of linear equations. | 23 June 2014, 12:11:57 UTC |
| 4751f6b | Julien Vitay | 22 June 2014, 16:36:46 UTC | Optimized the generated code. | 22 June 2014, 16:36:46 UTC |
| 2b7bdae | Julien Vitay | 22 June 2014, 15:32:11 UTC | Started implementing the full implicit method. | 22 June 2014, 15:32:11 UTC |
| b237a11 | Julien Vitay | 22 June 2014, 14:03:03 UTC | Evaluation of equations is now split into pre- and post-odes parts. The evaluation of coupled ODEs is now correct. | 22 June 2014, 14:03:03 UTC |
| 867b092 | Julien Vitay | 21 June 2014, 16:44:43 UTC | ODEs are now evaluated concurrently. Problem: non-ODEs are evaultes too late, for example: dmp/dt = ... r = pos(mp) where r takes the old value of mp. Solution: split the variables into pre-ODE, ODE, post-ODE | 21 June 2014, 16:44:43 UTC |
| 4977372 | Julien Vitay | 21 June 2014, 15:26:55 UTC | Merge branch 'develop' into implicit | 21 June 2014, 15:26:55 UTC |
| 5c62ed3 | Julien Vitay | 21 June 2014, 15:23:24 UTC | CSR now defines size (number of post neurons) and nb_synapses (total number of synapses. | 21 June 2014, 15:23:24 UTC |
| 5a4df0f | Julien Vitay | 21 June 2014, 15:08:26 UTC | ODEs are now solved synchornously. | 21 June 2014, 15:08:26 UTC |
| 378879f | Julien Vitay | 20 June 2014, 12:25:20 UTC | Started version 4.2.2 | 20 June 2014, 12:25:20 UTC |
| 70b7f31 | Julien Vitay | 20 June 2014, 10:52:22 UTC | Merge branch 'implicit' into develop Conflicts: ANNarchy/parser/Analyser.py | 20 June 2014, 10:52:22 UTC |
| dbc5e71 | Julien Vitay | 20 June 2014, 07:02:06 UTC | Splitted the file ANalyser.py into multiple files for clarity. | 20 June 2014, 07:02:06 UTC |
| 8559690 | Helge Dinkelbach | 19 June 2014, 16:20:05 UTC | pre-event learning components are updated before postsynaptic potential. | 19 June 2014, 16:20:05 UTC |
| 24d85c8 | Helge Dinkelbach | 19 June 2014, 15:37:17 UTC | replaced SpikePopulation::prepareNeurons() by SpikePopulation::updateRefractoryCounter. Implemented explicit psp function on spike dendrite, which directly increase the neuronal current. | 19 June 2014, 15:37:17 UTC |
| e149a1c | Helge Dinkelbach | 19 June 2014, 13:48:18 UTC | Fixed crash on computing spiking networks in parallel | 19 June 2014, 13:48:18 UTC |
| 1115444 | Julien Vitay | 17 June 2014, 13:28:47 UTC | Added global methods to disable/enable learning in all projections | 17 June 2014, 13:28:47 UTC |
| ae57f24 | Julien Vitay | 17 June 2014, 12:34:14 UTC | Added early-stopping of simulations. | 17 June 2014, 12:34:14 UTC |
| 3285232 | Julien Vitay | 17 June 2014, 09:29:46 UTC | The network class now defined a run_until method. | 17 June 2014, 09:29:46 UTC |
| 8d1099e | Julien Vitay | 17 June 2014, 07:33:47 UTC | Forgot a print in Population._set_cython_attribute... | 17 June 2014, 07:33:47 UTC |
| 4f2b89b | Julien Vitay | 16 June 2014, 15:16:01 UTC | The check on the spike type was not correct. | 16 June 2014, 15:16:01 UTC |
| 03e6e9f | Julien Vitay | 16 June 2014, 14:40:32 UTC | Totally removed parallel processing of spiking networks. | 16 June 2014, 14:40:32 UTC |
| 51dc171 | Julien Vitay | 16 June 2014, 14:06:39 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 16 June 2014, 14:06:39 UTC |
| 4182489 | Julien Vitay | 16 June 2014, 13:41:06 UTC | doc: reduced the depth of main toc in index.rst | 16 June 2014, 13:41:06 UTC |
| 0e10c3e | Helge Dinkelbach | 16 June 2014, 13:28:59 UTC | Merge branch 'develop' of https://bitbucket.org/annarchy/annarchy-4.0 into develop | 16 June 2014, 13:28:59 UTC |
| 8931461 | Helge Dinkelbach | 16 June 2014, 13:28:31 UTC | Reordered spiking functions. | 16 June 2014, 13:28:31 UTC |
| 4222b3b | Julien Vitay | 16 June 2014, 10:53:20 UTC | Started version 4.2.1. | 16 June 2014, 10:53:20 UTC |
| 0359950 | Julien Vitay | 16 June 2014, 08:46:34 UTC | Fixed bug when cython is absent (readthedocs). | 16 June 2014, 08:46:34 UTC |
| ac3394f | Julien Vitay | 16 June 2014, 08:43:00 UTC | Started verson 4.2.0. | 16 June 2014, 08:43:00 UTC |
| 19bdb89 | Julien Vitay | 16 June 2014, 08:38:34 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 16 June 2014, 08:38:34 UTC |
| 0701837 | Julien Vitay | 16 June 2014, 08:37:56 UTC | Added Rate2SpikePopulation. | 16 June 2014, 08:37:56 UTC |
| 94fa159 | Helge Dinkelbach | 16 June 2014, 05:07:07 UTC | Added visualization of spiking profile. | 16 June 2014, 05:07:07 UTC |
| 77a39c8 | Julien Vitay | 15 June 2014, 19:03:20 UTC | Forgot to add the files... | 15 June 2014, 19:03:20 UTC |
| f26c94f | Julien Vitay | 15 June 2014, 19:01:54 UTC | Merge branch 'develop' of bitbucket.org:annarchy/annarchy-4.0 into develop | 15 June 2014, 19:01:54 UTC |
| 685459a | Julien Vitay | 15 June 2014, 19:01:25 UTC | Added a Spike2RatePopulation. | 15 June 2014, 19:01:25 UTC |
| 5351e6f | Helge | 15 June 2014, 17:01:46 UTC | Added profiling of some spiking model functions (pre- and post-event, conductance, spike delivery). | 15 June 2014, 17:01:46 UTC |
| 7f58fec | Julien Vitay | 14 June 2014, 14:11:25 UTC | doc: updated the reference to the Brian STDP example. | 14 June 2014, 14:11:25 UTC |
| 0afb468 | Julien Vitay | 14 June 2014, 14:05:19 UTC | doc: finished the description of the STDP example. | 14 June 2014, 14:05:19 UTC |
| 8983ead | Julien Vitay | 14 June 2014, 12:38:27 UTC | doc: updated the API, described the Izhikevich example. | 14 June 2014, 12:38:27 UTC |
| df898a5 | Julien Vitay | 13 June 2014, 11:27:08 UTC | Merge branch 'issue_4' into develop | 13 June 2014, 11:27:08 UTC |
| 8d3e955 | Julien Vitay | 13 June 2014, 11:21:21 UTC | Messed around with the random distributions. | 13 June 2014, 11:21:21 UTC |
| e36ea40 | Helge Dinkelbach | 12 June 2014, 11:42:45 UTC | Implementation of synaptic delay for spiking neurons. | 12 June 2014, 11:42:45 UTC |
| c6201bb | Helge Dinkelbach | 12 June 2014, 09:41:08 UTC | Splitted up dendrite templates for easier coding. | 12 June 2014, 09:41:08 UTC |
| d67c5ce | Helge Dinkelbach | 12 June 2014, 09:30:32 UTC | Major reimplementation of handling spike events. | 12 June 2014, 09:30:32 UTC |
| c461c8c | Julien Vitay | 12 June 2014, 09:20:21 UTC | Populations and Projections can now be saved and loaded individually. | 12 June 2014, 09:20:21 UTC |
