https://github.com/qqwang-berkeley/JUM

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c59a199 Add files via upload 04 January 2018, 20:39:14 UTC
2a30913 Delete JUM_1.3.7.tar.gz 04 January 2018, 20:37:00 UTC
0b494cd Delete JUM_1.3.5.tar.gz 04 January 2018, 20:36:45 UTC
2638553 Delete JUM_1.3.3.tar.gz 04 January 2018, 20:36:36 UTC
b0385ea Delete JUM_1_3_2.tar.gz 04 January 2018, 20:21:22 UTC
726c1cb Delete JUM_v1.3.1.tar.gz 04 January 2018, 20:21:13 UTC
6498cb2 Update Updated JUM manual for 1.3.7+ 04 January 2018, 20:20:38 UTC
5d03b9d Update Updated JUM manual for 1.3.7+ 07 December 2017, 20:58:30 UTC
3c8d33f Update Updated JUM manual for 1.3.7+ 30 November 2017, 19:13:35 UTC
9a7aed2 Update Updated JUM manual for 1.3.7+ 29 November 2017, 20:40:26 UTC
9961c14 Update Updated JUM manual for 1.3.7+ 28 November 2017, 22:09:27 UTC
27c8240 Update Updated JUM manual for 1.3.7+ 21 November 2017, 00:23:25 UTC
bcdb626 Update Updated JUM manual for 1.3.7+ 15 November 2017, 23:56:32 UTC
aed508a Update Updated JUM manual for 1.3.7+ 08 November 2017, 17:35:39 UTC
e7d5158 map AS event to gene track added 07 November 2017, 21:42:07 UTC
741ff60 Delete JUM_1.3.7.tar.gz 07 November 2017, 21:41:37 UTC
a14f3bf mapping AS event to gene added 07 November 2017, 21:15:17 UTC
bb27055 Delete JUM_v1.3.0.tar.gz 07 November 2017, 19:49:06 UTC
63fc914 Update Updated JUM manual for 1.3.7+ 07 November 2017, 19:48:43 UTC
bbedd05 Update and rename Updated manual JUM_1.3.6+ to Updated JUM manual for 1.3.7+ 07 November 2017, 19:29:43 UTC
8b43953 Update and rename Updated manual JUM_1.3.5+ to Updated manual JUM_1.3.6+ 04 November 2017, 20:08:41 UTC
dcecd56 Delete Manual 26 October 2017, 22:38:31 UTC
8bd30a5 Updated manual for JUM version 1.3.5 and forward In the previous versions, JUM will only take junctions that receive at least X (user-chosen number) unique mapped reads in every replicates of all conditions for downstream analysis. In version JUM 1.3.5 and forward, JUM will take junctions that receive at least X (user-chosen number) unique mapped reads in every replicates of at least one condition for downstream analysis. This update of JUM covers junctions that are specific to one condition and tolerates fluctuations among the replicates of different conditions better. 26 October 2017, 22:34:47 UTC
ace839f Create Updated manual JUM_1.3.5+ 26 October 2017, 21:58:24 UTC
5ee3ef0 Updated junction filtering and IR calling 26 October 2017, 21:57:42 UTC
b64009d Delete JUM_1.3.5.tar.gz 26 October 2017, 21:57:02 UTC
fe5dfec Add files via upload 26 October 2017, 21:54:06 UTC
a3ccb02 Update Manual 29 August 2017, 19:15:17 UTC
f18c014 Updated Manual 20 July 2017, 17:31:11 UTC
5681fc3 UPDATED MANUAL Adding details about the format of the final output as well as the explanation of JUM_4.sh script available from JUM_1.3.3 20 July 2017, 17:30:13 UTC
fcf86ef Added JUM_4.sh that calculates % spliced in ratio 20 July 2017, 17:03:28 UTC
ad76038 Corrected a few typos from 1.3.1 20 July 2017, 17:02:15 UTC
4adf42d Merge pull request #6 from qqwang-arnold/new-version Add files via upload 24 March 2017, 00:37:47 UTC
919a863 Add files via upload 24 March 2017, 00:37:19 UTC
221debb Merge pull request #5 from qqwang-arnold/edit_readme_manual Edit readme manual 22 March 2017, 04:50:31 UTC
02f24aa Update Manual 22 March 2017, 04:48:41 UTC
dec33d1 Update Manual 22 March 2017, 04:34:58 UTC
ac2949a Update README.md 22 March 2017, 04:03:00 UTC
3ac0538 Update README.md 22 March 2017, 03:14:36 UTC
61d490f Merge pull request #4 from qqwang-arnold/upload Upload source code 17 March 2017, 07:18:53 UTC
51fe3b3 Add files via upload 17 March 2017, 07:17:54 UTC
64dc66f Update README.md 17 March 2017, 07:17:10 UTC
1159d67 Merge pull request #3 from qqwang-arnold/edit_readme Edit readme 17 March 2017, 07:12:21 UTC
b6540d8 Create Manual 17 March 2017, 07:11:25 UTC
6a02b51 Update README.md 17 March 2017, 07:09:32 UTC
3e81439 Merge pull request #2 from qqwang-arnold/manual-again Manual again 17 March 2017, 07:03:49 UTC
5683543 Update manual 17 March 2017, 07:01:38 UTC
9b9c6dc Update README.md 17 March 2017, 06:20:04 UTC
ef09227 Merge pull request #1 from qqwang-arnold/Manual JUM Manual 17 March 2017, 06:13:26 UTC
8ecc530 JUM Manual 17 March 2017, 06:09:32 UTC
4b0519b Initial commit 16 March 2017, 21:31:13 UTC
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