| 219a91a | Mathias Walzer | 28 March 2011, 12:14:48 UTC | mostly linux related - dependencies for packaging changed, warning against doxygen vers 1.6.3 - 1.7.1 in case of building doc_tutorials-version correction git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8209 6adb6e08-d915-0410-941f-83917bcadc18 | 28 March 2011, 12:14:48 UTC |
| 0142a5b | Stephan Aiche | 28 March 2011, 11:17:44 UTC | fixed broken Mac OS X installer git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8206 6adb6e08-d915-0410-941f-83917bcadc18 | 28 March 2011, 11:17:44 UTC |
| cd5bb3e | Mathias Walzer | 28 March 2011, 11:04:01 UTC | mostly linux related - dependencies for packaging changed, warning against doxygen vers 1.5.2 - 1.7.1 in case of building doc_tutorials git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8205 6adb6e08-d915-0410-941f-83917bcadc18 | 28 March 2011, 11:04:01 UTC |
| 01cd6e5 | Timo Sachsenberg | 11 March 2011, 14:12:46 UTC | forgot one file: removed unit_is:ppm git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8181 6adb6e08-d915-0410-941f-83917bcadc18 | 11 March 2011, 14:12:46 UTC |
| 05bb62d | Timo Sachsenberg | 11 March 2011, 13:46:53 UTC | removed non-functional ppm option from dialog git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8180 6adb6e08-d915-0410-941f-83917bcadc18 | 11 March 2011, 13:46:53 UTC |
| 01754aa | Sandro Andreotti | 10 March 2011, 13:20:37 UTC | added entries to changelog git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8178 6adb6e08-d915-0410-941f-83917bcadc18 | 10 March 2011, 13:20:37 UTC |
| 9617414 | Sandro Andreotti | 10 March 2011, 13:06:29 UTC | documentation -- hint for model files git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8177 6adb6e08-d915-0410-941f-83917bcadc18 | 10 March 2011, 13:06:29 UTC |
| 619bcd7 | Stephan Aiche | 09 March 2011, 15:52:12 UTC | this hopefully fixes last nights build error on VS9 x64 debug git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8175 6adb6e08-d915-0410-941f-83917bcadc18 | 09 March 2011, 15:52:12 UTC |
| 00b279a | Stephan Aiche | 08 March 2011, 15:54:08 UTC | customized shot noise in RawMSSignalSim git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8174 6adb6e08-d915-0410-941f-83917bcadc18 | 08 March 2011, 15:54:08 UTC |
| 3231938 | Sandro Andreotti | 08 March 2011, 15:30:43 UTC | Test fix? git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8173 6adb6e08-d915-0410-941f-83917bcadc18 | 08 March 2011, 15:30:43 UTC |
| 937673c | Chris Bielow | 08 March 2011, 15:15:58 UTC | ** fixed two bugs in MSSimulator git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8172 6adb6e08-d915-0410-941f-83917bcadc18 | 08 March 2011, 15:15:58 UTC |
| 4a92eb7 | Chris Bielow | 08 March 2011, 08:49:04 UTC | ** fixed the last three windows warnings git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8171 6adb6e08-d915-0410-941f-83917bcadc18 | 08 March 2011, 08:49:04 UTC |
| 49d69fc | Stephan Aiche | 07 March 2011, 15:33:59 UTC | reverted white-noise model to pre [8146] and added additional detector noise part git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8170 6adb6e08-d915-0410-941f-83917bcadc18 | 07 March 2011, 15:33:59 UTC |
| 35bb2ff | Sandro Andreotti | 07 March 2011, 14:19:29 UTC | Param: more reasonable upper bound for the precursor charge selected for fragmentation. Now set to 5 instead of 30 git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8169 6adb6e08-d915-0410-941f-83917bcadc18 | 07 March 2011, 14:19:29 UTC |
| 822075e | Chris Bielow | 07 March 2011, 14:12:55 UTC | ** updated CHANGELOG git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8168 6adb6e08-d915-0410-941f-83917bcadc18 | 07 March 2011, 14:12:55 UTC |
| b38c604 | hp-23 | 07 March 2011, 13:57:41 UTC | fixed last windows warnings for SILACFilter.C, fixed last error from checker.log git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8167 6adb6e08-d915-0410-941f-83917bcadc18 | 07 March 2011, 13:57:41 UTC |
| f8c950e | Timo Sachsenberg | 07 March 2011, 13:26:06 UTC | added major changes in TOPPView git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8166 6adb6e08-d915-0410-941f-83917bcadc18 | 07 March 2011, 13:26:06 UTC |
| 9572a14 | Sandro Andreotti | 07 March 2011, 08:36:07 UTC | fixed a bug that leads to missing output in case of missing data. Not critical - no Tests affected - no other classes affected git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8165 6adb6e08-d915-0410-941f-83917bcadc18 | 07 March 2011, 08:36:07 UTC |
| 8e74899 | hp-23 | 06 March 2011, 13:44:49 UTC | fixed last windows warning for SILACAnalyzer.C git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8164 6adb6e08-d915-0410-941f-83917bcadc18 | 06 March 2011, 13:44:49 UTC |
| 7c437dc | Chris Bielow | 06 March 2011, 12:22:38 UTC | ** updated installer instructions git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8163 6adb6e08-d915-0410-941f-83917bcadc18 | 06 March 2011, 12:22:38 UTC |
| 02cd44b | Sandro Andreotti | 06 March 2011, 12:17:17 UTC | removed my unused debug method isZero git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8162 6adb6e08-d915-0410-941f-83917bcadc18 | 06 March 2011, 12:17:17 UTC |
| 867c082 | Chris Bielow | 06 March 2011, 12:04:18 UTC | ** fixed last warnings for Windows git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8161 6adb6e08-d915-0410-941f-83917bcadc18 | 06 March 2011, 12:04:18 UTC |
| c3c5019 | Chris Bielow | 06 March 2011, 11:33:39 UTC | ** disabled optimization for Param_test on Windows (due to recent 'out-of-heap' error) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8160 6adb6e08-d915-0410-941f-83917bcadc18 | 06 March 2011, 11:33:39 UTC |
| 8119f82 | hp-23 | 05 March 2011, 20:57:59 UTC | forgot log entry for rev 8158 (fixed warnings), fixed warning git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8159 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 20:57:59 UTC |
| 5a4ed4c | hp-23 | 05 March 2011, 20:34:51 UTC | git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8158 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 20:34:51 UTC |
| a1ea49c | hp-23 | 05 March 2011, 19:52:22 UTC | fixed coding convention mistakes git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8157 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 19:52:22 UTC |
| 3ccced2 | Sandro Andreotti | 05 March 2011, 19:33:56 UTC | doc git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8156 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 19:33:56 UTC |
| e1dc228 | Sandro Andreotti | 05 March 2011, 12:20:39 UTC | small fix avoids Nan values during training git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8155 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 12:20:39 UTC |
| 8e67341 | Chris Bielow | 05 March 2011, 11:28:07 UTC | ** small test fix in build system git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8154 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 11:28:07 UTC |
| af2c783 | Chris Bielow | 05 March 2011, 11:06:38 UTC | ** Fixed compile warnings git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8153 6adb6e08-d915-0410-941f-83917bcadc18 | 05 March 2011, 11:06:38 UTC |
| 1adc26e | Hendrik Weisser | 04 March 2011, 21:33:43 UTC | added test of 'invert' option git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8152 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 21:33:43 UTC |
| 8b44a06 | Hendrik Weisser | 04 March 2011, 18:46:16 UTC | updated changelog git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8151 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 18:46:16 UTC |
| 9560e0f | Hendrik Weisser | 04 March 2011, 17:41:11 UTC | updated docu git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8150 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 17:41:11 UTC |
| d5b3cf8 | Stephan Aiche | 04 March 2011, 17:07:04 UTC | started compress() test for ConvexHull2D git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8149 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 17:07:04 UTC |
| 67cdd5d | Stephan Aiche | 04 March 2011, 17:06:06 UTC | code based fix for #280; it should be replaced with the correct OpenMP method as soon as the apple-gcc-bug is fixed git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8148 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 17:06:06 UTC |
| 615c221 | Stephan Aiche | 04 March 2011, 17:05:01 UTC | readded commits [7606] and [7619] to SILACLabeler (they somehow got lost during merge of sim-branch) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8147 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 17:05:01 UTC |
| 5fefdd4 | Stephan Aiche | 04 March 2011, 17:03:15 UTC | RawSignalSimulation now adds white noise also to non-existing points (detector noise) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8146 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 17:03:15 UTC |
| 4d630cc | Stephan Aiche | 04 March 2011, 16:55:35 UTC | fixed inconsistent maintainer git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8145 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 16:55:35 UTC |
| 2bf9f9e | Sandro Andreotti | 04 March 2011, 16:54:35 UTC | changed maintainer git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8144 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 16:54:35 UTC |
| 5b41c4f | Sandro Andreotti | 04 March 2011, 16:53:25 UTC | doc and coding style git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8143 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 16:53:25 UTC |
| 7a1872e | Chris Bielow | 04 March 2011, 16:29:27 UTC | ** fixed warnings git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8142 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 16:29:27 UTC |
| 703fd0a | Chris Bielow | 04 March 2011, 16:02:41 UTC | ** fixed MapAligner_<X>_parameters.ini to avoid warnings from old parameter names git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8141 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 16:02:41 UTC |
| c6a55a1 | Mathias Walzer | 04 March 2011, 15:46:53 UTC | disabled MapAligner_6 test due to reworked RT alignment, leaving the rest apparently already tested. SEE REV 7809 -test redesign pending. git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8140 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 15:46:53 UTC |
| 1443478 | Timo Sachsenberg | 04 March 2011, 14:57:46 UTC | fixed coding convention git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8139 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 14:57:46 UTC |
| 5988636 | Timo Sachsenberg | 04 March 2011, 14:10:26 UTC | maintainer git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8138 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 14:10:26 UTC |
| 9116ec7 | Timo Sachsenberg | 04 March 2011, 14:05:40 UTC | maintainer of some visualisation files git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8137 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 14:05:40 UTC |
| 4f9ce2a | Chris Bielow | 04 March 2011, 13:52:52 UTC | ** minor change to OpenMSInfo.C git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8136 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 13:52:52 UTC |
| e352966 | Chris Bielow | 04 March 2011, 12:57:53 UTC | ** fixed #277 git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8135 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 12:57:53 UTC |
| 7053b49 | Lars Nilse | 04 March 2011, 12:30:22 UTC | local scope in SILACAnalyzer.C added => reduced memory footprint git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8134 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 12:30:22 UTC |
| d6ee4bb | hp-23 | 04 March 2011, 11:17:08 UTC | fixed class test for SILACFilter, very little performance fix for SILACAnalyzer git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8133 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 11:17:08 UTC |
| 2be49d0 | Chris Bielow | 04 March 2011, 10:11:12 UTC | ** small checker fix git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8132 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 10:11:12 UTC |
| 7796d6e | Chris Bielow | 04 March 2011, 10:08:56 UTC | ** fixed FalseDiscoveryRate_test.C git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8131 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 10:08:56 UTC |
| 33a84e6 | Stephan Aiche | 04 March 2011, 10:08:43 UTC | and some more inconsistent maintainers git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8130 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 10:08:43 UTC |
| 3dd2700 | Stephan Aiche | 04 March 2011, 09:55:53 UTC | fixed Inconsistent maintainers and adopted DataFilters git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8129 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 09:55:53 UTC |
| 3c16776 | Stephan Aiche | 04 March 2011, 09:50:23 UTC | fixed some warnings (VS C4305; conversion and truncation) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8127 6adb6e08-d915-0410-941f-83917bcadc18 | 04 March 2011, 09:50:23 UTC |
| febdd0b | hp-23 | 03 March 2011, 22:48:06 UTC | fixed bug in class test git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8126 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 22:48:06 UTC |
| a557f00 | hp-23 | 03 March 2011, 22:05:58 UTC | updated TOPP test for SILACAnalyzer, fixed bug in numbering clusters git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8125 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 22:05:58 UTC |
| 58f848f | Hendrik Weisser | 03 March 2011, 21:08:35 UTC | even more small fixes (checker script) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8123 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 21:08:35 UTC |
| bf96070 | Hendrik Weisser | 03 March 2011, 20:57:20 UTC | more small fixes (checker script) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8122 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 20:57:20 UTC |
| 1af2f6b | Hendrik Weisser | 03 March 2011, 20:55:31 UTC | added parameter docu git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8121 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 20:55:31 UTC |
| f83635a | Hendrik Weisser | 03 March 2011, 20:37:25 UTC | removed legacy code (previously commented out) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8120 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 20:37:25 UTC |
| d62e52a | Hendrik Weisser | 03 March 2011, 20:13:37 UTC | small fixes (checker script) git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8119 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 20:13:37 UTC |
| 1450512 | Sandro Andreotti | 03 March 2011, 20:13:27 UTC | Added option to write out training files for libSVM tools instead of training the model. Added Parameters for the SVC step. git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8118 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 20:13:27 UTC |
| 1cdfef0 | Sandro Andreotti | 03 March 2011, 20:11:40 UTC | Added SvmTheoreticalNetworkGeneratorTrainer to theses files to have the UTILS doc generated git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8117 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 20:11:40 UTC |
| 60ebb43 | Hendrik Weisser | 03 March 2011, 16:56:52 UTC | addendum to last commit: new test git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8115 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 16:56:52 UTC |
| da33c0a | Hendrik Weisser | 03 March 2011, 16:55:33 UTC | unified and documented output formats, updated tests git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8113 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 16:55:33 UTC |
| b63c6ea | Chris Bielow | 03 March 2011, 16:42:51 UTC | ** fixed compile warnings and checker errors git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8112 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 16:42:51 UTC |
| 6dff6bc | hp-23 | 03 March 2011, 15:45:58 UTC | fixed class tests, corrected inconsistent maintainers git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8110 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 15:45:58 UTC |
| 3e2f643 | Timo Sachsenberg | 03 March 2011, 15:35:00 UTC | more Maintainer entries git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8109 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 15:35:00 UTC |
| a1affa4 | Timo Sachsenberg | 03 March 2011, 15:23:23 UTC | added maintainer for DIALOGSs git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8108 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 15:23:23 UTC |
| 295ae45 | Timo Sachsenberg | 03 March 2011, 15:17:43 UTC | added maintainer for VISUALIZERs git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8107 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 15:17:43 UTC |
| 01cb24b | Chris Bielow | 03 March 2011, 13:56:09 UTC | ** more docu git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8104 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 13:56:09 UTC |
| 9d96396 | Hendrik Weisser | 03 March 2011, 13:49:10 UTC | fixed test, added docu git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8103 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 13:49:10 UTC |
| f0bfbb6 | Chris Bielow | 03 March 2011, 13:25:58 UTC | ** fixed some TOPP docu git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8102 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 13:25:58 UTC |
| fb9da53 | Sandro Andreotti | 03 March 2011, 12:59:53 UTC | Fixed test bug git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8101 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 12:59:53 UTC |
| fd35d1a | Stephan Aiche | 03 March 2011, 12:38:09 UTC | 1st attempt to fix ionsim test git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8100 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 12:38:09 UTC |
| 392b75b | Timo Sachsenberg | 03 March 2011, 11:05:25 UTC | removed example ttd for INTERNAL tools to prevent complications git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8099 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 11:05:25 UTC |
| ee8e3c5 | Stephan Aiche | 03 March 2011, 10:30:24 UTC | added missing OpenMP include guard git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8097 6adb6e08-d915-0410-941f-83917bcadc18 | 03 March 2011, 10:30:24 UTC |
| 4d1ab6e | Chris Bielow | 02 March 2011, 22:02:25 UTC | ** some more docu for ExecutePipeline git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8096 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 22:02:25 UTC |
| 9a3268d | hp-23 | 02 March 2011, 19:01:56 UTC | added class tests, fixed coding convention mistakes git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8094 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 19:01:56 UTC |
| 219a9e8 | Chris Bielow | 02 March 2011, 17:35:29 UTC | ** iTRAQAnalyzer: added filename to consensusXML for tracking ** some docu git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8092 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 17:35:29 UTC |
| 717973f | Stephan Aiche | 02 March 2011, 17:15:49 UTC | added missing tests git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8091 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 17:15:49 UTC |
| e90f6cf | Lars Nilse | 02 March 2011, 17:09:46 UTC | ExecutePipeline docu updated git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8090 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 17:09:46 UTC |
| ca95168 | Chris Bielow | 02 March 2011, 15:59:46 UTC | ** fixed compile error git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8088 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 15:59:46 UTC |
| 18dea99 | Chris Bielow | 02 March 2011, 14:39:07 UTC | ** fixed bug introduced in [8058] git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8086 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 14:39:07 UTC |
| 77ac45f | Sandro Andreotti | 02 March 2011, 14:24:28 UTC | minor change git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8085 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 14:24:28 UTC |
| 2bec439 | Sandro Andreotti | 02 March 2011, 14:00:29 UTC | fixed QString error git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8084 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 14:00:29 UTC |
| 3b8db36 | Sandro Andreotti | 02 March 2011, 13:53:37 UTC | Changes in SvmTheoreticalSpectrumGenerator: 1. coding style 2. no longer inherits from TheoreticalSpectrumGenerator as there was no is-a relationship. Only the base class default parameters were used (so new default parameters were added to replace those that were inherited) 3. small re-arrangements to allow a omp parallel for loop to parallelize the time critical step of svm_predict calls 4. fixed a bug leading to Segmentation faults when copying a SvmTheoreticalSpectrumGenerator object because of svm_model pointers. Therefore now boost shared_pointers are used. Tests are adapted to the changes in SvmTheoreticalSpectrumGenerator Same holds for the changes in SvmTheoreticalSpectrumGeneratorSet git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8083 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:53:37 UTC |
| bb4b461 | Chris Bielow | 02 March 2011, 13:41:59 UTC | ** fixed #271 git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8082 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:41:59 UTC |
| bda460c | Sandro Andreotti | 02 March 2011, 13:37:19 UTC | fixed checker error git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8081 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:37:19 UTC |
| b306563 | Sandro Andreotti | 02 March 2011, 13:34:25 UTC | minor change git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8080 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:34:25 UTC |
| 1fe20ee | Sandro Andreotti | 02 March 2011, 13:33:35 UTC | fixed checker error git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8079 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:33:35 UTC |
| 6ca293c | Sandro Andreotti | 02 March 2011, 13:26:22 UTC | Added missing test for SvmTheoreticalSpectrumGeneratorTrainer git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8078 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:26:22 UTC |
| 8594b54 | Sandro Andreotti | 02 March 2011, 13:24:27 UTC | Added missing entry of SvmTheoreticalSpectrumGeneratorSet.h git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8077 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 13:24:27 UTC |
| 277f473 | Alexandra Zerck | 02 March 2011, 12:56:14 UTC | fixed PrecursorSelection tests git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8076 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 12:56:14 UTC |
| 1a785ff | Chris Bielow | 02 March 2011, 12:30:42 UTC | ** improved XTandem error message git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8074 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 12:30:42 UTC |
| db81669 | Oliver Kohlbacher | 02 March 2011, 08:35:56 UTC | git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8071 6adb6e08-d915-0410-941f-83917bcadc18 | 02 March 2011, 08:35:56 UTC |
| 0863f05 | Stephan Aiche | 01 March 2011, 17:35:02 UTC | checker fixes * added missing tests for ConvexHull2D * added missing tests for StringList * re-added accidentally removed test in SILACLabeler * removed unused variable in ConvexHull2D git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8068 6adb6e08-d915-0410-941f-83917bcadc18 | 01 March 2011, 17:35:02 UTC |
| 327eca5 | Stephan Aiche | 01 March 2011, 16:17:34 UTC | fixed most of the maintainer inconsistencies git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8066 6adb6e08-d915-0410-941f-83917bcadc18 | 01 March 2011, 16:17:34 UTC |
| b383ab2 | Stephan Aiche | 01 March 2011, 15:30:00 UTC | workaround for BUG 280 (#280) to make it work in Release 1.8 git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.8@8064 6adb6e08-d915-0410-941f-83917bcadc18 | 01 March 2011, 15:30:00 UTC |
