439bb62 | mvdbeek | 07 May 2024, 13:55:37 UTC | Create version 24.0.2 | 07 May 2024, 13:55:37 UTC |
03d1f66 | Marius van den Beek | 06 May 2024, 08:15:30 UTC | Merge pull request #18096 from bernt-matthias/topic/output-filter-fp [24.0] tool linters: output filters should only consider child filter nodes | 06 May 2024, 08:15:30 UTC |
f57b68c | Matthias Bernt | 04 May 2024, 14:04:02 UTC | linters: output filters should only consider child filter nodes otherwise these option filters (which we should document) produce false positives https://github.com/galaxyproject/tools-iuc/blob/57fa4dcee2aaa115df4a5b7173a3a8fb889bc5a3/tools/bwa/bwa_macros.xml#L83 | 04 May 2024, 14:16:35 UTC |
9c43535 | Martin Cech | 03 May 2024, 21:16:43 UTC | Merge pull request #18092 from ahmedhamidawan/pinned_histories_on_top_multiview [24.0] History Multiview panel shows pinned histories on top | 03 May 2024, 21:16:43 UTC |
2866345 | Ahmed Awan | 03 May 2024, 15:40:08 UTC | remove a couple tooltips that render incorrectly | 03 May 2024, 15:40:08 UTC |
bb24c23 | Ahmed Awan | 03 May 2024, 15:32:31 UTC | [24.0] History Multiview panel shows pinned histories on top Fixes https://github.com/galaxyproject/galaxy/issues/18082 | 03 May 2024, 15:32:31 UTC |
dcf8207 | John Davis | 03 May 2024, 14:44:47 UTC | Merge pull request #18091 from bernt-matthias/skip-name-restore [24.0] Tool linters: allow to skip by old linter names (by allowing to skip linter modules) | 03 May 2024, 14:44:47 UTC |
8a15165 | Dannon | 03 May 2024, 14:27:56 UTC | Merge pull request #18061 from dannon/citations-list-default-prop-fix [24.0] CitationsList - fix prop spec and config access. | 03 May 2024, 14:27:56 UTC |
ca6b91d | mvdbeek | 03 May 2024, 11:47:13 UTC | Merge branch 'release_23.2' into release_24.0 | 03 May 2024, 11:47:13 UTC |
a7af352 | Marius van den Beek | 03 May 2024, 11:44:23 UTC | Merge pull request #18083 from davelopez/23.2_backport_18052 [23.2] Fix history export with missing dataset hids | 03 May 2024, 11:44:23 UTC |
2bb61ea | Marius van den Beek | 03 May 2024, 11:40:51 UTC | Merge pull request #18078 from mvdbeek/better_exception_extract_dataset [24.0] Improve error message for ``Extract dataset`` tool | 03 May 2024, 11:40:51 UTC |
07aa429 | Matthias Bernt | 03 May 2024, 10:48:07 UTC | linting: restore possibiity to skip old linter function names until 23.2 we had linter functions lint_xyz in linter modules xyz. with 24.0 we splited the functions linter classes. lint contexts allow to skip linters by name (xyz for the old functions now the class name), i.e. we can not skip by the old names anymore. this may break planemo command lines xref https://github.com/galaxyproject/planemo/pull/1441#discussion_r1587995463. here I suggest to add a check for the module name against the names listed in the skip list. this restores the possibility to skip by old linter names and adds the possibility to skip whole linter modules (which might be handy anyway). tried to add some tests that hopefully help to maintain this functionality. | 03 May 2024, 11:05:15 UTC |
0a784e4 | Marius van den Beek | 03 May 2024, 07:20:24 UTC | Merge pull request #18041 from dannon/extra-exception-logging [24.0] Adds logging of messageExceptions in the fastapi exception handler. | 03 May 2024, 07:20:24 UTC |
1bea8a7 | mvdbeek | 02 May 2024, 15:31:21 UTC | Cancel ProcessPoolFuture when aborting job Fixes the occasional timeout error in jobs that follow the `test_abort_fetch_job` test. | 02 May 2024, 15:31:26 UTC |
419e495 | davelopez | 25 April 2024, 10:06:28 UTC | Add test to verify export dataset without hid works | 02 May 2024, 11:21:27 UTC |
78bf048 | davelopez | 25 April 2024, 09:24:56 UTC | Remove unused parameters in get_export_dataset_extra_files_dir_name | 02 May 2024, 11:21:16 UTC |
ab868b3 | davelopez | 25 April 2024, 09:23:26 UTC | Use dataset's encoded_id instead of hid for export filenames | 02 May 2024, 11:21:07 UTC |
acec4f6 | mvdbeek | 23 April 2024, 09:54:47 UTC | Improve error message for __EXTRACT_DATASETS__ tool Provides a reasonable error message to users, instead of the internal error https://sentry.galaxyproject.org/share/issue/a197159192b64b9db065a762ee5dbbfc/: ``` KeyError: 'Dataset collection has no element_identifier with key 2.' File "galaxy/tools/__init__.py", line 1972, in handle_single_execution rval = self.execute( File "galaxy/tools/__init__.py", line 2069, in execute return self.tool_action.execute( File "galaxy/tools/actions/model_operations.py", line 88, in execute self._produce_outputs( File "galaxy/tools/actions/model_operations.py", line 119, in _produce_outputs tool.produce_outputs( File "galaxy/tools/__init__.py", line 3351, in produce_outputs extracted_element = collection[incoming["which"]["identifier"]] File "galaxy/model/__init__.py", line 6434, in __getitem__ raise KeyError(error_message) ``` Also makes the `identifier` parameter explicitly required (it is now inferred to be optional because text parameters are by default optional if no validator raises an exception upon validating an empty string). That prevents ``` KeyError: 'Dataset collection has no element_identifier with key None.' File "galaxy/tools/__init__.py", line 1972, in handle_single_execution rval = self.execute( File "galaxy/tools/__init__.py", line 2069, in execute return self.tool_action.execute( File "galaxy/tools/actions/model_operations.py", line 88, in execute self._produce_outputs( File "galaxy/tools/actions/model_operations.py", line 119, in _produce_outputs tool.produce_outputs( File "galaxy/tools/__init__.py", line 3351, in produce_outputs extracted_element = collection[incoming["which"]["identifier"]] File "galaxy/model/__init__.py", line 6434, in __getitem__ raise KeyError(error_message) ``` | 02 May 2024, 10:40:52 UTC |
7408ebb | mvdbeek | 02 May 2024, 10:27:06 UTC | Start work on 24.0.2.dev0 | 02 May 2024, 10:27:06 UTC |
592cf1e | mvdbeek | 02 May 2024, 10:27:00 UTC | Create version 24.0.1 | 02 May 2024, 10:27:00 UTC |
e5c59e1 | Dannon Baker | 24 April 2024, 15:34:52 UTC | Fix imports after suggestions from code review. | 01 May 2024, 15:01:30 UTC |
e2798c9 | Dannon | 24 April 2024, 15:33:31 UTC | Apply suggestions from code review Co-authored-by: Marius van den Beek <m.vandenbeek@gmail.com> | 01 May 2024, 15:01:30 UTC |
1c1317b | Dannon Baker | 23 April 2024, 17:41:43 UTC | Only log if it's a 500 | 01 May 2024, 15:01:29 UTC |
52a7a14 | Dannon Baker | 23 April 2024, 17:39:15 UTC | Downgrade message to log.info to avoid sending redundantly to sentry | 01 May 2024, 15:01:29 UTC |
28f0fc8 | Dannon Baker | 23 April 2024, 12:52:16 UTC | Chage MessageException typing to only accept str as err_msg. | 01 May 2024, 15:01:29 UTC |
114803b | Dannon Baker | 23 April 2024, 01:32:31 UTC | Force MessageExceptions used in workflow modules to have a string error message. | 01 May 2024, 15:01:22 UTC |
2a083fa | Dannon Baker | 22 April 2024, 21:32:26 UTC | Adds logging of messageExceptions in the fastapi exception handler. We're intentionally not doing a full log.exception with the traceback here, though we could. This exception will also be dispatched to Sentry if configured, this just makes logs less opaque when one sees a 500. | 01 May 2024, 15:00:05 UTC |
49ca43c | Marius van den Beek | 30 April 2024, 15:02:29 UTC | Merge pull request #18068 from davelopez/24.0_fix_history_update_time_after_bulk_op [24.0] Fix history update time after bulk operation | 30 April 2024, 15:02:29 UTC |
6ed6843 | Marius van den Beek | 30 April 2024, 13:58:46 UTC | Merge pull request #18070 from jdavcs/24.0_pendingrollback_rsrepo [24.0] Check database connection to issue a rollback if no connection | 30 April 2024, 13:58:46 UTC |
f237455 | Nicola Soranzo | 30 April 2024, 13:47:24 UTC | Merge branch 'release_23.2' into release_24.0 | 30 April 2024, 13:47:24 UTC |
51d8743 | davelopez | 30 April 2024, 08:41:58 UTC | Update models to include UsesCreateAndUpdateTime mixin For the sake of consistency, those models that have `create_time`, `update_time` and `tags` should share the same interface to update the `update_time` when tags are added or removed. | 30 April 2024, 08:43:48 UTC |
dbdfcb4 | davelopez | 29 April 2024, 16:56:31 UTC | Only call update if it exists | 30 April 2024, 08:43:47 UTC |
407708f | davelopez | 29 April 2024, 14:17:25 UTC | Move update to tag handler | 30 April 2024, 08:43:47 UTC |
a1fc936 | davelopez | 29 April 2024, 12:26:45 UTC | Mark item as updated when undelete had no effect Usually if the dataset was not deleted or if it was purged and un-deleting does not do anything | 30 April 2024, 08:43:46 UTC |
7329257 | davelopez | 29 April 2024, 12:00:52 UTC | Mark the item as updated after altering the associated tags | 30 April 2024, 08:43:46 UTC |
c6f776d | davelopez | 29 April 2024, 12:00:20 UTC | Add tests to ensure history update_time gets updated We need this after a bulk operation to ensure the client will catch-up with the results (even if no-op) so it knows the operation ended. | 30 April 2024, 08:43:45 UTC |
7d1da18 | John Davis | 29 April 2024, 18:29:08 UTC | Merge pull request #18052 from davelopez/24.0_fix_missing_hid_history_export [24.0] Fix history export with missing dataset hids | 29 April 2024, 18:29:08 UTC |
724e795 | John Davis | 29 April 2024, 18:18:16 UTC | Check db connection to issue a rollback if no connection | 29 April 2024, 18:18:16 UTC |
984c53e | Marius van den Beek | 29 April 2024, 13:59:20 UTC | Merge pull request #18060 from ElectronicBlueberry/fix-comments-lost-on-import [24.0] Fix comments lost on import | 29 April 2024, 13:59:20 UTC |
ecef3ef | Marius van den Beek | 29 April 2024, 13:57:47 UTC | Merge pull request #18053 from SaimMomin12/release_23.2 [23.2] Updated the datatypes name for FASTK tool | 29 April 2024, 13:57:47 UTC |
97efcea | Dannon Baker | 26 April 2024, 15:25:55 UTC | Explicitly specify that outputFormat is a string -- this fixes tsc getting confused below when reassigning | 26 April 2024, 15:25:55 UTC |
fe8ecb1 | Dannon Baker | 26 April 2024, 13:30:02 UTC | Fix usage of citations_export_message when config is not loaded yet | 26 April 2024, 13:42:58 UTC |
d3c7638 | Dannon Baker | 26 April 2024, 13:17:37 UTC | Fix CitationsList default prop. | 26 April 2024, 13:17:37 UTC |
69fb6ce | Laila Los | 26 April 2024, 12:41:42 UTC | fix comments used before assigned | 26 April 2024, 12:41:42 UTC |
f9b2a68 | Laila Los | 26 April 2024, 12:25:50 UTC | use dict instead of relying on list order | 26 April 2024, 12:25:50 UTC |
061d5a4 | Laila Los | 25 April 2024, 13:29:05 UTC | copy comments when copying workflow | 25 April 2024, 13:29:05 UTC |
e0bc13c | Saim Momin | 25 April 2024, 12:09:06 UTC | [23.2] Updated the datatypes name for FASTK tool | 25 April 2024, 12:09:06 UTC |
b7eda89 | davelopez | 25 April 2024, 10:06:28 UTC | Add test to verify export dataset without hid works | 25 April 2024, 10:06:28 UTC |
6748d0e | davelopez | 25 April 2024, 09:24:56 UTC | Remove unused parameters in get_export_dataset_extra_files_dir_name | 25 April 2024, 09:24:56 UTC |
b20f4a0 | davelopez | 25 April 2024, 09:23:26 UTC | Use dataset's encoded_id instead of hid for export filenames | 25 April 2024, 09:23:26 UTC |
21a57d2 | Dannon | 24 April 2024, 16:54:21 UTC | Merge pull request #18046 from mvdbeek/access_logging_middleware [24.0] Add middleware for logging start and end of request | 24 April 2024, 16:54:21 UTC |
ab08738 | mvdbeek | 24 April 2024, 15:38:58 UTC | Update setup-miniconda@v3 action | 24 April 2024, 15:38:58 UTC |
64be33e | mvdbeek | 24 April 2024, 15:11:53 UTC | Update k8s-version | 24 April 2024, 15:11:53 UTC |
f26e90f | mvdbeek | 23 April 2024, 13:50:13 UTC | Log start and end of request Configurable via `use_access_logging_middleware`. Looks like this: ``` galaxy.webapps.base.api DEBUG 2024-04-23 17:14:43,776 [pN:main,p:73562,tN:MainThread] GET /history/current_history_json?since=2024-04-22T17:24:13.936493 f8c75e2c-30eb-4fcb-9b96-25bd4b2df435 galaxy.webapps.base.api DEBUG 2024-04-23 17:14:48,719 [pN:main,p:73562,tN:MainThread] GET /history/current_history_json?since=2024-04-22T17:24:13.936493 f8c75e2c-30eb-4fcb-9b96-25bd4b2df435 200 galaxy.webapps.base.api DEBUG 2024-04-23 17:14:51,767 [pN:main,p:73562,tN:MainThread] GET /history/current_history_json?since=2024-04-22T17:24:13.936493 2fe6094c-67bb-4144-a19f-cbb4a1b18fb4 galaxy.webapps.base.api DEBUG 2024-04-23 17:14:51,786 [pN:main,p:73562,tN:MainThread] GET /history/current_history_json?since=2024-04-22T17:24:13.936493 2fe6094c-67bb-4144-a19f-cbb4a1b18fb4 200 galaxy.webapps.base.api DEBUG 2024-04-23 17:14:53,139 [pN:main,p:73562,tN:MainThread] GET /api/entry_points?running=true 763693e9-4fd3-4a97-a100-a3c259b4b4c8 ``` | 24 April 2024, 15:08:06 UTC |
625cd8a | Martin Cech | 23 April 2024, 15:50:16 UTC | Merge pull request #18033 from martenson/storage-details [24.0] clarify the object store relocate functionality | 23 April 2024, 15:50:16 UTC |
4582704 | Martin Cech | 23 April 2024, 15:49:04 UTC | Merge pull request #18044 from mvdbeek/ensure_offset_and_limit_not_negative [24.0] Ensure that offset and limit are never negative | 23 April 2024, 15:49:04 UTC |
b97825b | John Davis | 23 April 2024, 13:32:11 UTC | Merge pull request #18036 from mvdbeek/implicit_conversion_no_hid_fix [24.0] Fix History Dataset Association creation so that hid is always set | 23 April 2024, 13:32:11 UTC |
5545dcd | mvdbeek | 23 April 2024, 12:00:13 UTC | Adjust and enhance job filtering test | 23 April 2024, 12:00:13 UTC |
4bc09c0 | mvdbeek | 23 April 2024, 09:55:44 UTC | Ensure that offset and limit are never negative And set minimum limit consistently to 1 ... 0 doesn't seem to have much utility but would also be an option. Fixes part of https://github.com/galaxyproject/galaxy/issues/18043. | 23 April 2024, 09:56:36 UTC |
7722cf0 | Martin Cech | 22 April 2024, 19:13:57 UTC | Merge pull request #18040 from mvdbeek/show_error_on_wrong_quota_source_fitler [24.0] Change wrong quota_source value from KeyError to ValueError | 22 April 2024, 19:13:57 UTC |
857a14e | mvdbeek | 22 April 2024, 17:29:43 UTC | Change wrong quota_source value from KeyError to ValueError Which is caught in https://github.com/galaxyproject/galaxy/blob/44782a44c14885df2d9d1bcb91698245bfb3aed8/lib/galaxy/managers/base.py#L1121-L1124 Fixes https://sentry.galaxyproject.org/share/issue/16a3342631224d8292ef792298175dea/: ``` KeyError: "Could not find key nul in object store keys [None, 'scratch']" File "starlette/applications.py", line 123, in __call__ await self.middleware_stack(scope, receive, send) File "starlette/middleware/errors.py", line 186, in __call__ raise exc File "starlette/middleware/errors.py", line 164, in __call__ await self.app(scope, receive, _send) File "starlette_context/middleware/raw_middleware.py", line 92, in __call__ await self.app(scope, receive, send_wrapper) File "starlette/middleware/base.py", line 189, in __call__ with collapse_excgroups(): File "contextlib.py", line 155, in __exit__ self.gen.throw(typ, value, traceback) File "starlette/_utils.py", line 93, in collapse_excgroups raise exc File "starlette/middleware/base.py", line 191, in __call__ response = await self.dispatch_func(request, call_next) File "galaxy/webapps/galaxy/fast_app.py", line 108, in add_x_frame_options response = await call_next(request) File "starlette/middleware/base.py", line 165, in call_next raise app_exc File "starlette/middleware/base.py", line 151, in coro await self.app(scope, receive_or_disconnect, send_no_error) File "starlette/middleware/exceptions.py", line 62, in __call__ await wrap_app_handling_exceptions(self.app, conn)(scope, receive, send) File "starlette/_exception_handler.py", line 64, in wrapped_app raise exc File "starlette/_exception_handler.py", line 53, in wrapped_app await app(scope, receive, sender) File "starlette/routing.py", line 758, in __call__ await self.middleware_stack(scope, receive, send) File "starlette/routing.py", line 778, in app await route.handle(scope, receive, send) File "starlette/routing.py", line 299, in handle await self.app(scope, receive, send) File "starlette/routing.py", line 79, in app await wrap_app_handling_exceptions(app, request)(scope, receive, send) File "starlette/_exception_handler.py", line 64, in wrapped_app raise exc File "starlette/_exception_handler.py", line 53, in wrapped_app await app(scope, receive, sender) File "starlette/routing.py", line 74, in app response = await func(request) File "fastapi/routing.py", line 278, in app raw_response = await run_endpoint_function( File "fastapi/routing.py", line 193, in run_endpoint_function return await run_in_threadpool(dependant.call, **values) File "starlette/concurrency.py", line 42, in run_in_threadpool return await anyio.to_thread.run_sync(func, *args) File "anyio/to_thread.py", line 56, in run_sync return await get_async_backend().run_sync_in_worker_thread( File "anyio/_backends/_asyncio.py", line 2144, in run_sync_in_worker_thread return await future File "anyio/_backends/_asyncio.py", line 851, in run result = context.run(func, *args) File "galaxy/webapps/galaxy/api/history_contents.py", line 465, in index items = self.service.index( File "galaxy/webapps/galaxy/services/history_contents.py", line 312, in index return self.__index_v2(trans, history_id, params, serialization_params, filter_query_params, accept) File "galaxy/webapps/galaxy/services/history_contents.py", line 972, in __index_v2 filters = self.history_contents_filters.parse_query_filters_with_relations(filter_query_params, history_id) File "galaxy/managers/history_contents.py", line 525, in parse_query_filters_with_relations return super().parse_query_filters(query_filters) File "galaxy/managers/base.py", line 1087, in parse_query_filters return self.parse_filters(filter_params) File "galaxy/managers/base.py", line 1096, in parse_filters filter_ = self.parse_filter(attr, op, val) File "galaxy/managers/base.py", line 1116, in parse_filter orm_filter = self._parse_orm_filter(attr, op, val) File "galaxy/managers/history_contents.py", line 601, in _parse_orm_filter if (column_filter := get_filter(attr, op, val)) is not None: File "galaxy/managers/history_contents.py", line 595, in get_filter raise KeyError(f"Could not find key {val} in object store keys {list(ids.keys())}") ``` | 22 April 2024, 17:44:31 UTC |
b8c39a5 | Martin Cech | 22 April 2024, 16:58:02 UTC | change language to relocate | 22 April 2024, 16:58:02 UTC |
121f27e | mvdbeek | 22 April 2024, 14:09:22 UTC | Default HID to -1 if for whatever reason we didn't record a HID | 22 April 2024, 15:20:42 UTC |
44782a4 | Marius van den Beek | 22 April 2024, 14:13:36 UTC | Merge pull request #18023 from mvdbeek/fix_non_ready_collection_submission [24.0] Raise appropriate exception if user forces a collection that is not populated with elements as input | 22 April 2024, 14:13:36 UTC |
c2140bd | mvdbeek | 22 April 2024, 11:32:09 UTC | Avoid flush in set_meta by using MetadataFile.uuid | 22 April 2024, 11:32:09 UTC |
badbd3a | mvdbeek | 22 April 2024, 09:06:10 UTC | Fix premature flush in hda_manager.copy | 22 April 2024, 09:52:19 UTC |
a56f642 | mvdbeek | 21 April 2024, 22:04:50 UTC | Drop unused method | 22 April 2024, 09:52:19 UTC |
e1a45a2 | mvdbeek | 21 April 2024, 21:56:43 UTC | Drop unused copy_from_ldda method | 22 April 2024, 09:52:19 UTC |
d889002 | mvdbeek | 21 April 2024, 21:55:41 UTC | Commit only after copying library item to history | 22 April 2024, 09:52:19 UTC |
5aecc08 | mvdbeek | 21 April 2024, 21:45:05 UTC | Fall back to populated method if collection not committed yet | 22 April 2024, 09:52:19 UTC |
bf34997 | mvdbeek | 21 April 2024, 21:44:40 UTC | Fix unitialize typo | 22 April 2024, 09:52:19 UTC |
5648478 | mvdbeek | 21 April 2024, 20:51:36 UTC | Adjust schema for collection elements of collections that aren't populated | 22 April 2024, 09:52:18 UTC |
e3aba2d | mvdbeek | 21 April 2024, 20:51:00 UTC | Relax requirement for DCEs of collections that are not populated | 21 April 2024, 20:51:00 UTC |
1b1094b | mvdbeek | 21 April 2024, 09:48:46 UTC | Set (copied) output hid before queuing job Otherwise we may end up with a history item that either temporarily or permanently lacks a hid. This could currently be encountered via implicit conversion that set `visible=False` in the when calling `datatype.convert_dataset`. | 21 April 2024, 19:10:51 UTC |
b1333e0 | mvdbeek | 21 April 2024, 19:09:21 UTC | Also perform strict checks for new database objects I think that's the missing piece to find all the instances where we might still be committing HDAs without HIDs, and I think we might have a similar bug for DatasetCollectionElements. | 21 April 2024, 19:10:51 UTC |
a671090 | mvdbeek | 19 April 2024, 08:12:18 UTC | Fix test_map_over_empty_collection test It was using the wrong id type, and since we don't prepopulate the collection we need to wait until discovery happens. It actually nicely illustrates the bug. | 21 April 2024, 07:58:22 UTC |
cff711f | mvdbeek | 18 April 2024, 18:51:33 UTC | Raise appropriate exception if user forces non-ready collection as input | 21 April 2024, 07:58:21 UTC |
8f4968f | Marius van den Beek | 21 April 2024, 07:57:19 UTC | Merge pull request #18027 from davelopez/24.0_fix_files_sources_error_handling [24.0] Fix remote files sources error handling | 21 April 2024, 07:57:19 UTC |
03111fa | Martin Cech | 19 April 2024, 20:23:10 UTC | move the link from heading to the body and change to a button - add minor text adjustments - close the modal when clicking on the currently selected storage | 19 April 2024, 20:23:10 UTC |
97371f1 | Martin Cech | 19 April 2024, 19:37:25 UTC | add relocation docs to the object store samples | 19 April 2024, 19:37:25 UTC |
9d715ce | Martin Cech | 19 April 2024, 16:28:45 UTC | Merge pull request #18029 from mvdbeek/colabfold_backport [24.0] Backport colabfold tar file datatype | 19 April 2024, 16:28:45 UTC |
47f2ca6 | Alexander OSTROVSKY | 28 February 2024, 21:06:31 UTC | add colabfold tar file datatype | 19 April 2024, 16:26:23 UTC |
0d1c41f | davelopez | 19 April 2024, 14:36:51 UTC | Prefer AuthenticationRequired for credential issues | 19 April 2024, 14:36:51 UTC |
f98f6f7 | John Davis | 19 April 2024, 14:35:09 UTC | Merge pull request #18025 from jdavcs/24.0_tag_regex [24.0] Fix tag regex pattern | 19 April 2024, 14:35:09 UTC |
ac8338f | John Davis | 19 April 2024, 13:47:38 UTC | Update test/unit/schema/test_schema.py Co-authored-by: Dannon <dannon.baker@gmail.com> | 19 April 2024, 13:47:38 UTC |
90bb4c9 | John Davis | 19 April 2024, 13:47:31 UTC | Update test/unit/schema/test_schema.py Co-authored-by: Dannon <dannon.baker@gmail.com> | 19 April 2024, 13:47:31 UTC |
b798109 | John Davis | 19 April 2024, 13:47:18 UTC | Update lib/galaxy/model/tags.py Co-authored-by: Dannon <dannon.baker@gmail.com> | 19 April 2024, 13:47:18 UTC |
b5a93f0 | John Davis | 19 April 2024, 13:47:11 UTC | Update lib/galaxy/model/tags.py Co-authored-by: Dannon <dannon.baker@gmail.com> | 19 April 2024, 13:47:11 UTC |
645ff00 | John Davis | 19 April 2024, 13:47:00 UTC | Update lib/galaxy/model/tags.py Co-authored-by: Dannon <dannon.baker@gmail.com> | 19 April 2024, 13:47:00 UTC |
b32480c | John Davis | 19 April 2024, 13:46:48 UTC | Update lib/galaxy/model/tags.py Co-authored-by: Dannon <dannon.baker@gmail.com> | 19 April 2024, 13:46:48 UTC |
53f5b5f | davelopez | 19 April 2024, 11:44:08 UTC | Use less cryptic error when unexpected error | 19 April 2024, 11:44:08 UTC |
91bf0c6 | davelopez | 19 April 2024, 11:32:24 UTC | Handle Dropbox special case | 19 April 2024, 11:32:24 UTC |
0bbb982 | davelopez | 19 April 2024, 11:31:30 UTC | Handle errors creating new entries more gracefully | 19 April 2024, 11:31:30 UTC |
e765e66 | davelopez | 19 April 2024, 11:29:02 UTC | Handle PyFilesystem2 errors more gracefully | 19 April 2024, 11:29:02 UTC |
9c26321 | David López | 19 April 2024, 09:57:18 UTC | Merge pull request #18026 from mvdbeek/fix_test_get_tags_histories_content [24.0] Fix ``test_get_tags_histories_content`` test | 19 April 2024, 09:57:18 UTC |
e32b9aa | mvdbeek | 19 April 2024, 08:16:32 UTC | Fix test_get_tags_histories_content test The calling code expects that this creates a dataset, but instead this used to create dataset collection. | 19 April 2024, 08:22:45 UTC |
ee64fc4 | John Davis | 19 April 2024, 01:45:39 UTC | Update client valid tag regex | 19 April 2024, 02:40:18 UTC |
c31bccf | John Davis | 18 April 2024, 23:05:06 UTC | Fix regex pattern | 19 April 2024, 02:40:13 UTC |
7ec1311 | John Davis | 18 April 2024, 22:34:01 UTC | Add unit test to verify spllitting tag string into name/value | 19 April 2024, 02:40:08 UTC |
972f918 | John Davis | 18 April 2024, 22:31:45 UTC | Add unit test (failing) for tag string regex | 19 April 2024, 02:40:04 UTC |