| c180ae3 | Michael Osthege | 20 June 2022, 12:27:41 UTC | Bump for `4.0.1` release | 20 June 2022, 12:48:23 UTC |
| 72ea746 | Ricardo | 20 June 2022, 11:07:43 UTC | Update passing mypy file | 20 June 2022, 12:19:47 UTC |
| 3e6949c | Ricardo | 20 June 2022, 09:48:53 UTC | Update Aesara dependency to 2.7.3 | 20 June 2022, 12:19:47 UTC |
| 403f2d5 | Danh Phan | 20 June 2022, 11:58:12 UTC | Add constant_data into sample_numpyro_nuts() (#5807) Add constant_data into sample_numpyro_nuts() Co-authored-by: Michael Osthege <m.osthege@fz-juelich.de> | 20 June 2022, 11:58:12 UTC |
| 45a816e | Hector Munoz | 20 June 2022, 10:59:44 UTC | Align conda envs and add Windows 3.9 env (#5895) * Remove conda sorter from `pre-commit` config | 20 June 2022, 10:59:44 UTC |
| 7cc24bc | Michael Osthege | 19 June 2022, 10:17:28 UTC | Docstring formatting and type hints | 20 June 2022, 10:14:21 UTC |
| e6537e4 | Michael Osthege | 19 June 2022, 09:43:51 UTC | Relocate `PointFunc` definition for nicer type hints | 20 June 2022, 10:14:21 UTC |
| a4ace35 | Dan Foreman-Mackey | 07 June 2022, 21:31:06 UTC | Fixing keyword args in top-level pm.compile_fn `Model.compile_fn` requires all parameters except `outs` to be keyword arguments so the top level `compile_fn` didn't work as written. | 20 June 2022, 10:14:21 UTC |
| e58c0e6 | Maxim Kochurov | 20 June 2022, 09:40:32 UTC | refactor sampling_jax postrocessing to avoid jit (#5908) Refactor sampling_jax postrocessing to avoid JIT and multiple function definitions Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 20 June 2022, 09:40:32 UTC |
| 0ba47b5 | Danh Phan | 18 June 2022, 09:32:00 UTC | Update dockerfile to PyMC v4 (#5881) * rename and update build docker container * add a script for running docker container from bash * update running docker container from juppyter notebook * simplify into one bash script * remove root user from Dockerfile * remove obsolete scripts * update documents on running PyMC in Docker | 18 June 2022, 09:32:00 UTC |
| f9b749b | Christian Luhmann | 18 June 2022, 07:58:44 UTC | Rename pm.Constant to pm.DiracDelta (#5903) | 18 June 2022, 07:58:44 UTC |
| 66215ac | Ricardo Vieira | 17 June 2022, 16:42:16 UTC | Disable dark mode in docs (#5904) | 17 June 2022, 16:42:16 UTC |
| 3bf95ce | Brandon T. Willard | 14 June 2022, 21:22:09 UTC | Specify owner value in GenTensorVariable This is to avoid issues in upcoming Aesara releases that require the argument. | 17 June 2022, 10:33:25 UTC |
| 6bcbe29 | Brandon T. Willard | 03 June 2022, 15:11:24 UTC | Update clone_replace strict keyword name | 17 June 2022, 10:33:25 UTC |
| 282e516 | Brandon T. Willard | 03 June 2022, 15:32:28 UTC | Update Aesara to 2.7.2 | 17 June 2022, 10:33:25 UTC |
| d7b5153 | Ricardo | 17 June 2022, 09:50:55 UTC | Add jupyter-sphinx dependency to dev environments Closes #5845 | 17 June 2022, 10:23:20 UTC |
| 6e6865b | Ricardo | 16 June 2022, 07:21:19 UTC | Run black on core notebooks | 17 June 2022, 10:23:20 UTC |
| a886030 | Ricardo | 16 June 2022, 07:14:41 UTC | Override notebook kernel when building the docs Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 17 June 2022, 10:23:20 UTC |
| 562be37 | Hector Munoz | 14 June 2022, 18:51:46 UTC | Convert `rng_seeder` to `random_seed` in 'Prior and Posterior Predictive Checks' notebook (#5896) * Convert `rng_seeder` to `random_seed` * Pass rng directly to random_seed * Use `MutableData` instead of `Data` | 14 June 2022, 18:51:46 UTC |
| ce07e70 | Larry Dong | 13 June 2022, 22:24:27 UTC | Remove self-directing arrow in observed nodes | 14 June 2022, 11:27:00 UTC |
| 5d003dc | Fernando Irarrázaval | 14 June 2022, 08:49:19 UTC | Remove t suffix from Model methods (#5863) * Future warning for logpt * Future warning for dlogpt and d2logpt * Updated references to logpt, and updated varlogpt, datalogpt, joint_logpt * Fix issue with d2logpt * Added tests * Fix typo * Updated release notes for 4.0 * Added potentiallogpt test * Updated developer guide * Update pymc/distributions/logprob.py Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> * Removed t from varlogp_nojact * Revert Release Notes * Revert changes to developer guide * Future warning for logpt * Future warning for dlogpt and d2logpt * Updated references to logpt, and updated varlogpt, datalogpt, joint_logpt * Fix issue with d2logpt * Added tests * Fix typo * Updated release notes for 4.0 * Added potentiallogpt test * Update pymc/distributions/logprob.py Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> * Removed t from varlogp_nojact * Revert Release Notes * Updated release notes for 4.0 * Revert Release Notes * Added deprecation of functions/properties ending with t to release notes * Update RELEASE-NOTES.md Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> | 14 June 2022, 08:49:19 UTC |
| a5f3e45 | Ricardo | 13 June 2022, 07:31:00 UTC | Cast rounded input replacement to original discrete dtype in sample_smc | 13 June 2022, 16:30:20 UTC |
| fb3e65f | Ricardo | 13 June 2022, 08:47:05 UTC | Add sample_stats to Slice sampler | 13 June 2022, 16:11:50 UTC |
| 6f61f1c | Ricardo | 13 June 2022, 08:46:54 UTC | Test steps stats_dtypes Related to #5883 | 13 June 2022, 16:11:50 UTC |
| 09d9d73 | Ricardo | 13 June 2022, 08:46:44 UTC | Remove unused variable in NDArray.setup | 13 June 2022, 16:11:50 UTC |
| 338ec15 | Maxim Kochurov | 12 June 2022, 18:44:09 UTC | explicit error about empirical approx (#5874) * explicit error about empirical approx * fix an error message * Write more detailed error message Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 12 June 2022, 18:44:09 UTC |
| 78b1f17 | Michael Osthege | 12 June 2022, 11:33:33 UTC | Align advertised `Metropolis` `stats_dtypes` with changes from 1e7d91f | 12 June 2022, 12:45:59 UTC |
| 3f2afb2 | Michael Osthege | 11 June 2022, 17:59:11 UTC | Update dev guide (#5810) * Write instructions on running the test suite * Add troubleshooting tips on pre-commit * Update guide on implementing new distributions * Update dev guide introduction * Reformat developer guide as Markdown with one sentence per line * Replace internal links * Fix class links * Orphanize dev guid and resolve merge conflicts * Update versioning explanation Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 11 June 2022, 17:59:11 UTC |
| ab05d44 | Ryan Russell | 10 June 2022, 19:13:28 UTC | docs: Fix Examples link in README (#5860) Signed-off-by: Ryan Russell <git@ryanrussell.org> | 10 June 2022, 19:13:28 UTC |
| bfe9f33 | Chris Fonnesbeck | 08 June 2022, 20:36:31 UTC | Moved wiki install guides into installation.md directly (#5869) * Moved wiki install guides into installation.d directly * Platform agnostic install instructions; removed PyMC3 instructions * Tweaks to text * Attempt to fix pre-commit failure | 08 June 2022, 20:36:31 UTC |
| da1f63b | Juan Orduz | 06 June 2022, 21:39:38 UTC | [DOC] PyMC, Aesara and Aeppl intro notebook (#5721) * add raw version of the notebook * first section on aesara * random variables section * update * prune notebook * add intro section and simple examples * rename nb and add section on intro aesara graphs * add random samples section * improve notation * clean notebook and extract main sections [WIP] * fix suggestions part 1 * fix suggestions part 2 * fix suggestions part 3 * fix suggestions part 3 * move notebook to right folder * remove links * remove links and typos * fix suggestions n + 1 XD * address further comments * fix content feedback * style corrections part 1 * attempt to adds cross-references * fix methods references * add some cross-references [WIP] * more formating and final comments * Present pm.logp before model utilities * Fix some references and minor changes * Add Model reference * correct func path references * typo Co-authored-by: Ricardo <ricardo.vieira1994@gmail.com> | 06 June 2022, 21:39:38 UTC |
| 3619bca | Thomas Wiecki | 06 June 2022, 16:34:21 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config (#5857) | 06 June 2022, 16:34:21 UTC |
| c51b44a | twiecki | 30 May 2022, 07:06:04 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config | 04 June 2022, 16:52:44 UTC |
| 575454f | Kunal Ghosh | 03 June 2022, 19:36:29 UTC | Fixing student-T process doc-string | 03 June 2022, 20:47:08 UTC |
| 4e6527c | Thomas Wiecki | 03 June 2022, 15:51:31 UTC | Bump version to 4.0.0 🎉 | 03 June 2022, 15:51:31 UTC |
| e663f46 | Thomas Wiecki | 03 June 2022, 15:23:57 UTC | Remove developer guide. Needs to be updated eventually. | 03 June 2022, 15:50:44 UTC |
| 938604c | Ricardo | 03 June 2022, 14:16:35 UTC | Add temporary fix for pretty representation of SymbolicDistributions | 03 June 2022, 15:13:01 UTC |
| 57c6a8f | Ricardo | 03 June 2022, 13:55:41 UTC | Move printing-related tests to their own test module | 03 June 2022, 15:13:01 UTC |
| c758d0d | Alexandre Andorra | 03 June 2022, 14:43:38 UTC | Restructure Release Notes (#5832) * 1st try at restructuring * Add emojis and do-not-miss section * Apply suggestions from code review Co-authored-by: Michael Osthege <michael.osthege@outlook.com> Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> * Improve structure based on review * Apply suggestions from code review Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> * Improve structure again * Add release announcement * Apply suggestions from code review Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> * Apply suggestions from code review Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> * Apply suggestions from code review Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> * Add highlight of JAX backend. * Remove BART section and move links to where we remove it. * Move BART further down. Remove mention of size. Co-authored-by: Michael Osthege <michael.osthege@outlook.com> Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> | 03 June 2022, 14:43:38 UTC |
| 0d38abf | Ravin Kumar | 03 June 2022, 14:08:32 UTC | Move BMCP to top of book list | 03 June 2022, 14:28:34 UTC |
| 5da32ed | Ricardo | 03 June 2022, 12:27:42 UTC | Add comment to `set_data` condition where the length comes from a `shape[i]` graph | 03 June 2022, 14:28:09 UTC |
| 70b0c49 | Michael Osthege | 30 May 2022, 18:44:41 UTC | Automatically resize independently mutable dims via `set_data` | 03 June 2022, 14:28:09 UTC |
| 2120593 | Michael Osthege | 28 May 2022, 16:33:12 UTC | Warn about resizing `MutableData` dims that are not symbolically linked Closes #5812 | 03 June 2022, 14:28:09 UTC |
| a74592a | Michael Osthege | 28 May 2022, 16:32:15 UTC | Add `Model.set_dim` method for safer dims resizing | 03 June 2022, 14:28:09 UTC |
| 0e7cd1f | Michael Osthege | 26 May 2022, 20:00:27 UTC | Update guide on implementing new distributions Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 03 June 2022, 13:38:09 UTC |
| 2dc0009 | Michael Osthege | 26 May 2022, 19:23:06 UTC | Add troubleshooting tips on pre-commit | 03 June 2022, 13:38:09 UTC |
| 48eff60 | Michael Osthege | 26 May 2022, 18:58:39 UTC | Write instructions on running the test suite | 03 June 2022, 13:38:09 UTC |
| 559969c | Ricardo | 10 May 2022, 16:14:40 UTC | Update Aesara dependency | 02 June 2022, 22:37:35 UTC |
| 2d6304d | Oriol (ZBook) | 02 June 2022, 17:54:51 UTC | fix 404 and intersphinx | 02 June 2022, 22:33:32 UTC |
| 88a0f43 | Thomas Wiecki | 02 June 2022, 19:39:29 UTC | Bring back learn page. (#5833) * Bring back learning page. * Remove no-sidebar. * Updates to user guide. * Remove learn.md. * Add link to PyMC Labs. * Link to correct image. * Improve cosulting page. Rename to learn. * Change cards to use Oriol's proposed format. * fix sphinx build * add newline at end of file * ensure img kwarg is in the next line of directive definition Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 02 June 2022, 19:39:29 UTC |
| de9db67 | Purna Chandra Mansingh | 02 June 2022, 16:05:04 UTC | Deprecate remaining VI methods (#5806) * Deprecated remaining VI methods * Deleted flows and code for local and batched kwarg * removed rowwise from opvi.py * redo the test_variational_inference.py * refactored some test cases * removed mention of local from docstring * refactor some test in varialional_inference * did correction in docstring * removed batched dimension property * added symbolic_random * removed part = 'total' * refactor test_logq_globals and test_pickle_approx test * refactor test_init_groups | 02 June 2022, 16:05:04 UTC |
| b073fd8 | Ricardo | 02 June 2022, 09:05:28 UTC | Remove user-facing mentions of size in timeseries distributions | 02 June 2022, 16:02:50 UTC |
| 343a6f5 | Ricardo | 31 May 2022, 15:15:28 UTC | Use more wide default init_dist in GaussianRandomWalk and AR and raise UserWarning when not explicitly defined | 02 June 2022, 16:02:50 UTC |
| 12039e0 | Ricardo | 31 May 2022, 15:14:38 UTC | Rename GaussianRandomWalk `init` argument to `init_dist` and fix some type hints | 02 June 2022, 16:02:50 UTC |
| 42e3745 | Ricardo | 02 June 2022, 08:51:34 UTC | Do not issue warning when default transform of Mixture is None Also fixes typo in warning message | 02 June 2022, 14:22:05 UTC |
| db5c87e | Oriol Abril-Pla | 01 June 2022, 10:38:10 UTC | Update navbar (#5830) * start updating navbar * get navbar and redirects to work * make search bar return the same results from all websites * update requirements * remove search bar from sidebar * fix urls and add extra page * Update .pre-commit-config.yaml Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> | 01 June 2022, 10:38:10 UTC |
| 1e7d91f | Ricardo | 30 May 2022, 07:48:13 UTC | Make Metropolis cope better with multiple dimensions Metropolis now updates each dimension sequentially and tunes a proposal scale parameter per dimension | 31 May 2022, 21:20:17 UTC |
| 4810829 | Ricardo | 31 May 2022, 07:21:39 UTC | Move TestMetropolisProposal tests to TestMetropolis | 31 May 2022, 21:20:17 UTC |
| 6750ea7 | Osvaldo A Martin | 31 May 2022, 17:23:07 UTC | Supress warning SMC initialization (#5827) | 31 May 2022, 17:23:07 UTC |
| 6027be1 | Ricardo | 31 May 2022, 14:09:37 UTC | Raise NotImplementedError in sample_posterior_predictive_w | 31 May 2022, 16:26:29 UTC |
| ae578c2 | Maxim Kochurov | 24 May 2022, 11:23:57 UTC | Raise NotImplementedError in not yet refactored timeseries distributions Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com> | 31 May 2022, 16:26:29 UTC |
| 5703a9d | Alexandre Andorra | 30 May 2022, 18:03:08 UTC | Remove advanced Aesara usage guide (#5826) | 30 May 2022, 18:03:08 UTC |
| 6b22ed5 | Michael Osthege | 30 May 2022, 17:44:55 UTC | Add return type hints (#5819) * Add return type hints * Add type hints for rv arguments * Fix more type issues Closes #4880 Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 30 May 2022, 17:44:55 UTC |
| 57654dc | Ricardo | 20 January 2022, 18:25:14 UTC | Add name to CompountStep | 30 May 2022, 16:28:55 UTC |
| 35393af | Ricardo | 28 May 2022, 16:19:31 UTC | Avoid unnecessary slow compilation of Aesara functions in test_step | 30 May 2022, 16:28:55 UTC |
| e636852 | Ricardo | 20 January 2022, 18:24:47 UTC | Refactor TestStepMethods and reduce number of draws The number of draws was set too high to accommodate the worst / buggy samplers (see #5815) | 30 May 2022, 16:28:55 UTC |
| 70a3e0b | Ricardo | 28 May 2022, 16:00:36 UTC | Refactor Slice.astep method Avoid recreation of RaveledArrays in inner loops and repeated indexing of `self.w` | 30 May 2022, 16:28:55 UTC |
| f28f9cf | Ricardo | 28 May 2022, 16:10:00 UTC | Fix Slice sampler bugs introduced in b988ba99a084a18b2c907ef2ee4aeb1f4ab56160 1. The previous interval was of the form `[q0 - uniform(0, self.w), q0 + self.w]` which is not symmetric around q0 in expectation, breaking detailed balance. 2. The left/right bound values used for updating earlier variables were only set to the accepted values during tuning. This might have made bug 1 worse. | 30 May 2022, 16:28:55 UTC |
| de55543 | Danh Phan | 30 May 2022, 09:54:42 UTC | Add Quick links to Contributing guidelines (#5818) | 30 May 2022, 09:54:42 UTC |
| 4d2f3a8 | Ricardo | 25 May 2022, 15:38:01 UTC | Fallback to Aeppl when logp is not implemented | 26 May 2022, 12:24:49 UTC |
| 7d7d07c | Ricardo | 26 May 2022, 07:15:16 UTC | Update Aeppl dependency | 26 May 2022, 12:24:49 UTC |
| 7b239bb | Michael Osthege | 25 May 2022, 16:38:58 UTC | Limit model graph nodes to named model variables Some nodes such as `NoneConst` in an Aesara graph are named, but aren't model variables that the user is interested in. | 26 May 2022, 11:06:24 UTC |
| 2161664 | Michael Osthege | 25 May 2022, 15:44:46 UTC | Forward `dims` to reparametrized `Deterministic` This way `.prior(..., dims=...)` applies not only to the `_rotated_` RV but also to the `Deterministic` that the user is interested in. | 26 May 2022, 10:26:41 UTC |
| 9ca57bf | Michael Osthege | 25 May 2022, 15:40:51 UTC | Fix shape problem in GP priors Shape asserts were added in existing tests that covered both reparameterize=True/False. Closes #5803 | 26 May 2022, 10:26:41 UTC |
| b67a76f | Michael Osthege | 26 May 2022, 08:57:42 UTC | Pin blackjax version for testing to fix failing CI Related to https://github.com/blackjax-devs/blackjax/issues/212 | 26 May 2022, 10:26:41 UTC |
| 2adb346 | Ricardo Vieira | 24 May 2022, 20:45:35 UTC | Fix ReleaseNotes | 25 May 2022, 04:41:03 UTC |
| 62e1e9d | Ricardo | 23 May 2022, 11:05:09 UTC | Seed sampling in TestNutsCheckTrace.test_linalg | 24 May 2022, 20:33:39 UTC |
| 15431d9 | Ricardo | 23 May 2022, 12:08:22 UTC | Fix non-deterministic NUTS initialization when using ADVI | 24 May 2022, 20:33:39 UTC |
| cee2b30 | Ricardo | 23 May 2022, 13:04:57 UTC | Remove model.rng_seeder and allow compile_pymc to reseed RNG variables in compiled function Sampling functions now also accept RandomState or Generators as input to random_seed, similarly to how random_state behaves in scipy distributions. For backwards compatibility this argument was not renamed. | 24 May 2022, 20:33:39 UTC |
| 09240fc | Ricardo | 23 May 2022, 10:14:44 UTC | Update expected behavior of `sample`-related tests in relation to global seeding. Together, `test_sample_does_not_set_seed` and `test_parallel_sample_does_not_reuse_seed` covered two unspoken behaviors of `sample`: 1. When no seed is specified, PyMC shall not set global seed state of numpy in the main process. 2. When no seed is specified, sampling will depend on numpy global seeding state for reproducible behavior. Point 1 is due to PyMC legacy dependency on global seeding for step samplers. It tries to minimize "damage" by only setting global seeds when it absolutely needs to, in order to ensure deterministic sampling. Ideally calls to `numpy.seed` would never be made. Point 2 goes against NumPy current best practices of using None when defining new Generators / SeedSequences (https://numpy.org/doc/stable/reference/random/bit_generators/generated/numpy.random.SeedSequence.html#numpy.random.SeedSequence) The refactored tests cover point 1 more directly, and assert the opposite of point 2. | 24 May 2022, 20:33:39 UTC |
| c71fd4e | Ricardo | 23 May 2022, 06:56:38 UTC | Fix default use of global seeding | 24 May 2022, 20:33:39 UTC |
| 4caa5b9 | Ricardo | 19 May 2022, 15:36:10 UTC | Refactor RandomState/Generator reseeding logic in initial_point into aesaraf | 24 May 2022, 20:33:39 UTC |
| b5a5b56 | Michael Osthege | 23 May 2022, 13:49:41 UTC | Remove size from Distribution signatures (#5788) * Remove size from .dist() signature Closes #5754 * Align (Half)Flat signatures with superclass * Don't mention size in the docstring Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> * Revert changes in `rng_fn` signatures Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 23 May 2022, 13:49:41 UTC |
| d0af6b1 | larryshamalama | 22 May 2022, 11:23:21 UTC | New `var_names` kwarg for `pm.model_to_graphviz` (#5634) Enables positive selection of model variables to be included in the model graph. Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 22 May 2022, 11:23:21 UTC |
| 66fba38 | Ricardo Vieira | 22 May 2022, 07:47:33 UTC | Add warning about unobserved continuous censored distributions Co-authored-by: Michael Osthege <michael.osthege@outlook.com> Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 22 May 2022, 07:47:33 UTC |
| a95dd71 | Luke LB | 14 May 2022, 14:16:44 UTC | Require `pm.MutableData` or `add_coord(mutable=True)` for mutable dims This increases the safety of working with resizable dimensions. Dims created via `pm.Model(coords=...)` coordinates are now immutable. Only dimension lengths that are created anew from `pm.MutableData`, `pm.Data(mutable=True)`, or the underlying `add_coord(mutable=True)` will become shared variables. Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 21 May 2022, 19:47:02 UTC |
| 7ec106c | Michael Osthege | 21 May 2022, 10:54:10 UTC | Optionally pass `coords` when creating `pm.Data` variables Needed to create resizable dims with coordinate values, because coords passed to the model will become immutable dims. See https://github.com/pymc-devs/pymc/pull/5763. Also, because `pm.Data` variables can be N-dimensional, the coordinate values can't reliably be taken from the value. | 21 May 2022, 19:47:02 UTC |
| e83520e | Luke LB | 16 May 2022, 20:51:33 UTC | Remove ShapeWarning in favor of raising ValueError directly | 21 May 2022, 19:47:02 UTC |
| 2b7a3c2 | Oriol Abril-Pla | 20 May 2022, 15:16:31 UTC | add calendar to website (#5786) * add calendar to website * update navbar about item to pymc.io * update urls in intersphinx mapping * add description above the calendar | 20 May 2022, 15:16:31 UTC |
| b91283e | Ricardo | 20 January 2022, 18:28:45 UTC | Pass seed to `find_map` and set global seeds in `_iter_sample` and `_prepare_iter_sample` This reverts some changes in 47b61def5f24830e36714886356557a0e3918195 which wrongly disabled global seeding in some sampling contexts that still depended on it. | 19 May 2022, 22:05:24 UTC |
| 56ad6a9 | Ricardo | 20 January 2022, 18:28:18 UTC | Add explanation to test_sample_does_not_set_seed | 19 May 2022, 22:05:24 UTC |
| f0c8f55 | Juan Orduz | 19 May 2022, 22:03:57 UTC | Update pr_tutorial.md (#5724) * Update pr_tutorial.md Make the python version consistent on the PR tutorial. * update to python 3.9 | 19 May 2022, 22:03:57 UTC |
| 00d4372 | Ricardo | 18 May 2022, 08:27:13 UTC | Update distribution-related changes in RELEASE-NOTES.md | 19 May 2022, 05:48:12 UTC |
| c2d96cf | Ricardo | 18 May 2022, 07:36:41 UTC | Use unit normal as default init_dist in GaussianRandomWalk and AR | 19 May 2022, 05:48:12 UTC |
| 2536920 | Oriol Abril-Pla | 19 May 2022, 04:03:35 UTC | add subsections inside community section (#5782) | 19 May 2022, 04:03:35 UTC |
| 82f70fc | Ricardo | 18 May 2022, 08:01:11 UTC | Filter deterministics from initial_points returned by init_nuts | 18 May 2022, 09:35:43 UTC |
| 817f457 | Ricardo | 17 May 2022, 12:24:20 UTC | Remove size parameter from sample_posterior_predictive | 18 May 2022, 08:05:20 UTC |
| 862bd05 | lucianopaz | 12 May 2022, 14:16:09 UTC | Add compile_forward_sampling_function | 17 May 2022, 16:55:36 UTC |
| 4969460 | Ricardo | 17 May 2022, 12:39:55 UTC | Move Identity operator initialization close to class definition | 17 May 2022, 14:40:33 UTC |
| c327a02 | Ricardo | 17 May 2022, 12:38:08 UTC | Remove take_along_axis in favor of Aesara's implementation | 17 May 2022, 14:40:33 UTC |
