| 52f8673 | Thomas Wiecki | 16 August 2022, 18:56:31 UTC | Bump version to 4.1.5. | 16 August 2022, 18:56:31 UTC |
| 9883915 | Jonathan Pelham | 15 August 2022, 18:16:09 UTC | Added networkx export functionality (#6046) * Added networkx export functionality Apologies for delay but finally got around to updating the latest version of model_graph.py to include networkx export function as discussed in https://github.com/pymc-devs/pymc/pull/5677 * Update model_graph.py restoring whitespace https://github.com/pymc-devs/pymc/pull/5677#discussion_r841207472 * Corrected cluster(subgraph) behaviour subgraph(cluster) attributes are now stored on each node that is a member of that subgraph(cluster). * Update pymc/model_graph.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> * Correcting docstring spacing * Updated to include new function model_to_networkx * linted and checked by pre-commit * added test for model_to_networkx function * added function import * added model_to_networkx * corrected formatting * more linting * Update test_model_graph.py * Update __init__.py * Redid changes * added function to models.rst * corrected indent issue indent issue cause by merge resolution * corrected spelling error * added networkx to requirements * redid pre-commit and ran it twice * Update pymc/model_graph.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> * Update pymc/model_graph.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> * Update pymc/model_graph.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> * Update pymc/model_graph.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> * Update pymc/model_graph.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> * Removed trailing whitespace Removed trailing whitespace from lines 312, 314, * removing more trailing whitespace Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> Co-authored-by: Joni Pelham <j.g.pelham@cranfield.ac.uk> | 15 August 2022, 18:16:09 UTC |
| 906fcdc | Daniel Saunders | 13 August 2022, 14:45:08 UTC | Updated pymc.simulator docstring (typos, defaults, type description) (#6035) * Updated pymc.simulator docstring (typos, defaults, type description) Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 13 August 2022, 14:45:08 UTC |
| 7a5074e | Christian Luhmann | 11 August 2022, 16:35:54 UTC | update aeppl dependency to 0.0.34 | 11 August 2022, 17:40:32 UTC |
| ef2519f | Michael Osthege | 10 August 2022, 19:25:52 UTC | Fix AttributeError in HMC bad initial energy warning (#6037) * Fix AttributeError in HMC bad initial energy warning * Make pre-commit happy | 10 August 2022, 19:25:52 UTC |
| ad16bf4 | Willian Dihanster | 06 August 2022, 15:56:19 UTC | Removed assert_negative_support function call | 08 August 2022, 13:47:19 UTC |
| 75e6be0 | Luciano Paz | 08 August 2022, 13:00:46 UTC | Constrain priors with symmetric mass distribution (#5981) * find_constrained_prior now assumes symmetric probability mass above and below upper and lower by default * Fix typo in docstring Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> Co-authored-by: Alexandre Andorra <andorra.alexandre@gmail.com> Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 08 August 2022, 13:00:46 UTC |
| e64942b | Juan Orduz | 05 August 2022, 19:59:46 UTC | fix notebook dprint error (#6030) | 05 August 2022, 19:59:46 UTC |
| e2ff875 | Thomas Wiecki | 05 August 2022, 14:17:39 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config (#6008) | 05 August 2022, 14:17:39 UTC |
| a8279d7 | Josh Cook | 05 August 2022, 08:26:51 UTC | Pass user-provided NUTS kwargs to Numpyro (#6021) * refactor: update user supplied NUTS kwargs with defualts for Numpyro sampler * style: fix typehint in `sample_numpyro_nuts` * doc: add missing `initvals` to docstring of `sample_numpyro_nuts` * style: return typehint for `sample_numpyro_nuts` * refactor: change `var_names` typehint from `Iterable` to `Sequence` * test: updating NUTS kwargs for Numpyro sampler function * test: use monkeypatch to determine if custum NUTS kwargs are used * test: replace monkey patch with simpler mocking method | 05 August 2022, 08:26:51 UTC |
| f3ac08b | carlo | 05 August 2022, 08:24:59 UTC | Updating docstrings of distributions (#5998) * updating docstrings of distributions * updating dimentions following matplotlibs convention. also adding pablo as a contributor. Co-authored-by: pibieta <ibieta.pablo@gmail.com> * resolving @oriolabril review with @pibieta Co-authored-by: pibieta <ibieta.pablo@gmail.com> | 05 August 2022, 08:24:59 UTC |
| c93711a | Rowan | 05 August 2022, 02:30:36 UTC | issue6004 fixed example in docstring for set_data (#6028) Co-authored-by: Rowan Schaefer <rowanschaefer@Rowans-MacBook-Air.local> | 05 August 2022, 02:30:36 UTC |
| 36c5fb9 | Daniel Saunders | 05 August 2022, 02:29:56 UTC | fixed some docstring spacing around colons (#6027) | 05 August 2022, 02:29:56 UTC |
| 307e1c9 | Thomas Wiecki | 04 August 2022, 21:37:54 UTC | Revert "Proposal: Readd 3.7" (#6014) * Revert "Update setup.py" This reverts commit 60e26481696f3b09f5ee818bb578f17109647f95. * Revert "Readd 3.7" This reverts commit b08a2fced1d894aa5872856fccc23fde04fd8411. | 04 August 2022, 21:37:54 UTC |
| b506fec | Ben Mares | 04 August 2022, 14:09:41 UTC | Revert numpy warnings workaround (#6025) * Revert "Workaround to suporess (some) import warnings from NumPy" This has been fixed upstream in Aesara and is therefore no longer necessary. | 04 August 2022, 14:09:41 UTC |
| 9f93b3e | Josh Cook | 03 August 2022, 20:52:12 UTC | Typehints and updated docstring for Blackjax NUTS sampling function (#6022) * refactor: typehints for arguments and return of `sample_blackjax_nuts` * doc: style and add `initvals` to `sample_blackjax_nuts` docstring * refactor: change `var_names` from `Iterable` to `Sequence` typehint Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> * style: remove Iterable import Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 03 August 2022, 20:52:12 UTC |
| 18bbcbb | Maximilian | 02 August 2022, 08:28:07 UTC | Fix problems with specifying target_accept and nuts kwargs (#6018) Fix problem that target_accept is overwritten if nuts kwargs are specified Raise error when target_accept is specified twice; directly and in nuts kwargs Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 02 August 2022, 08:28:07 UTC |
| c8db06b | Michael Osthege | 27 July 2022, 12:24:16 UTC | Fix typos in Docker hub secret names (#6017) Closes #6015 | 27 July 2022, 12:24:16 UTC |
| 7d960fa | Thomas Wiecki | 26 July 2022, 16:17:50 UTC | Bump version to 4.1.4. | 26 July 2022, 16:17:50 UTC |
| 1184b0c | larryshamalama | 26 July 2022, 16:16:34 UTC | Create arrow to observation nodes subject to arbitrary `dtype` casting in `pm.model_to_graphviz` (#6011) * Adding graphviz area for observed nodes with dtype casting * Add unit test for obs dtype casting in ModelGraph * check data container for owner attribute * Adding comments for make_compute_graph pattern matching * Repositioned 'While True' loop to better account for arbitary number of dtype casts * Fix grammar in comment on dtype casting | 26 July 2022, 16:16:34 UTC |
| 3361176 | Thomas Wiecki | 26 July 2022, 08:04:43 UTC | Bump aesara to 2.7.9 and aeppl to 0.0.33 | 26 July 2022, 16:16:03 UTC |
| 7afae2a | Larry Dong | 19 July 2022, 02:28:57 UTC | Fix pm.Interpolated moment | 26 July 2022, 15:51:15 UTC |
| 60e2648 | Ravin Kumar | 25 July 2022, 15:16:40 UTC | Update setup.py | 26 July 2022, 08:01:39 UTC |
| b08a2fc | Ravin Kumar | 25 July 2022, 13:43:41 UTC | Readd 3.7 | 26 July 2022, 08:01:39 UTC |
| 73eac98 | Thomas Wiecki | 24 July 2022, 22:10:19 UTC | Bump aesara to 2.7.8. (#5995) * Bump aesara to 2.7.8. * Bump pre-commit aesara. * Ignore mypy typing errors for pymc/util.py * Add safety check for `xarray.Dataset` key types Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 24 July 2022, 22:10:19 UTC |
| 1101818 | Michael Osthege | 24 July 2022, 14:49:25 UTC | Move `MLDA` to `pymc-experimental` Closes #5942 Closes #4267 | 24 July 2022, 16:01:46 UTC |
| 4bd25ae | Michael Osthege | 24 July 2022, 13:03:03 UTC | Make mypy script more instructive (#6006) * Remove Aesara PEP 561 enforcement No longer needed since 2.6.0. * Make mypy script outputs more instructuve Closes #5685 | 24 July 2022, 13:03:03 UTC |
| a7684d1 | Reshama Shaikh | 22 July 2022, 22:16:40 UTC | contributing, jupyter style; author section more explicit (#6000) * contributing, jupyter style; author section more explicit * jupyter style guide; contributing; make Authors plural | 22 July 2022, 22:16:40 UTC |
| f9e0dfd | Tim Gates | 19 July 2022, 13:03:42 UTC | docs: Fix a few typos (#5988) There are small typos in: - docs/source/contributing/developer_guide.md - docs/source/contributing/jupyter_style.md - pymc/step_methods/hmc/hmc.py - pymc/step_methods/hmc/nuts.py Fixes: - Should read `interpreted` rather than `interpreded`. - Should read `total` rather than `totall`. - Should read `personal` rather than `presonal`. Signed-off-by: Tim Gates <tim.gates@iress.com> | 19 July 2022, 13:03:42 UTC |
| 710aee3 | Sandra Yojana Meneses | 18 July 2022, 15:43:37 UTC | Fix docker image build (#5977) * :bug: indent tags * :heavy_minus_sign: remove checkout * :bug: use var in command * :truck: renaming flow * :construction: conf for testing * :white_check_mark: trigger with PR * :truck: rename env var * :construction: commenting for testing * :heavy_plus_sign: add checkout * :rocket: remove testing conf | 18 July 2022, 15:43:37 UTC |
| 5c2eb5e | twiecki | 18 July 2022, 07:05:20 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config | 18 July 2022, 14:50:11 UTC |
| 2a9e86c | bherwerth | 17 July 2022, 18:07:44 UTC | Fix error when passing `coords` and `dims` in `sampling_jax` (#5983) * Use 'partial' to construct inference data (#5932) * Add test cases for dims & coords * Comment on use of 'partial' * Extend docstring and pass posterior after partial | 17 July 2022, 18:07:44 UTC |
| 78da937 | Michael Osthege | 15 July 2022, 11:01:25 UTC | Skip tests action if only other actions changed The tests don't need to run if it's just other workflows that are being changed. | 17 July 2022, 18:06:18 UTC |
| 87c22c3 | Pablo Ibieta-Jimenez | 17 July 2022, 12:04:29 UTC | Updated docstrings of some distribution classes inside multivariate.py (#5982) * updated docstrings of the first 7 distributions classes Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 17 July 2022, 12:04:29 UTC |
| 2583b7f | Thomas Wiecki | 15 July 2022, 10:34:28 UTC | Bump version to 4.1.3 | 15 July 2022, 10:34:28 UTC |
| 05e39e1 | ricardoV94 | 15 July 2022, 08:17:29 UTC | Remove internal uses of `patternbroadcast` and `unbroadcast` | 15 July 2022, 10:33:01 UTC |
| e25e42d | kees ter brugge | 12 July 2022, 12:17:03 UTC | Bump aesara dependency | 15 July 2022, 10:33:01 UTC |
| 8e92ac3 | Chris Fonnesbeck | 15 July 2022, 10:08:50 UTC | Point installation links to new installation guide in docs (#5873) * Point installation links to new installation guide in docs Co-authored-by: Michael Osthege <m.osthege@fz-juelich.de> Co-authored-by: Oriol Abril <oriol.abril.pla@gmail.com> | 15 July 2022, 10:08:50 UTC |
| 0380bf4 | Osvaldo A Martin | 13 July 2022, 15:49:11 UTC | remove white space | 13 July 2022, 16:37:40 UTC |
| c95c34a | Jonathan Lindbloom | 11 July 2022, 22:45:25 UTC | Update pymc/func_utils.py | 13 July 2022, 16:37:40 UTC |
| cb60ec0 | Jonathan-Lindbloom | 11 July 2022, 19:28:55 UTC | changed pm.Distribution to Distribution | 13 July 2022, 16:37:40 UTC |
| 69429ac | Jonathan Lindbloom | 11 July 2022, 19:13:59 UTC | Update pymc/func_utils.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 13 July 2022, 16:37:40 UTC |
| 5b51491 | Jonathan Lindbloom | 11 July 2022, 19:13:50 UTC | Update pymc/func_utils.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 13 July 2022, 16:37:40 UTC |
| 9aa46ac | Jonathan Lindbloom | 11 July 2022, 19:13:36 UTC | Update pymc/func_utils.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 13 July 2022, 16:37:40 UTC |
| ed9f0d6 | Jonathan Lindbloom | 11 July 2022, 19:13:26 UTC | Update pymc/func_utils.py Co-authored-by: Oriol Abril-Pla <oriol.abril.pla@gmail.com> | 13 July 2022, 16:37:40 UTC |
| 0e968b8 | Jonathan Lindbloom | 10 July 2022, 22:31:00 UTC | Update pymc/func_utils.py Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 13 July 2022, 16:37:40 UTC |
| 40964d7 | Jonathan-Lindbloom | 09 July 2022, 15:45:28 UTC | updated docstring for find_constrained_prior | 13 July 2022, 16:37:40 UTC |
| 7be9a19 | mariyayb | 09 July 2022, 15:32:40 UTC | docstring update OrderedProbit, ZeroInflatedBinomial, ZeroInflatedNegativeBinomial as in #5459 | 13 July 2022, 15:57:02 UTC |
| b94b8b6 | Saurabh Chopra | 09 July 2022, 16:25:18 UTC | add close-figs context on plot directive in ZeroInflatedPoisson class | 13 July 2022, 15:54:36 UTC |
| b647737 | Saurabh Chopra | 09 July 2022, 15:30:36 UTC | update docstrings in ZeroInflatedPoisson, DiracDelta and OrderedLogistic classes | 13 July 2022, 15:54:36 UTC |
| a9baa42 | SangamSwadik | 13 July 2022, 14:41:31 UTC | Correct docs for Bernoulli, Poisson, Negative Binomial, Geometric and HyperGeometric (#5958) * update docs for Bernoulli, Poisson, Negative Binomial, Geometric and add missing plot context in HyperGeometric * correct spacing Co-authored-by: SangamSwadiK <sangamswadiK@users.noreply.github.com> | 13 July 2022, 14:41:31 UTC |
| 4ccdf1e | SangamSwadik | 13 July 2022, 14:19:52 UTC | correct docstring in BetaBinomial Class (#5957) * update docs for numpydoc compliance * correct spacing Co-authored-by: SangamSwadiK <sangamswadiK@users.noreply.github.com> | 13 July 2022, 14:19:52 UTC |
| 32ffaf5 | bherwerth | 11 July 2022, 21:46:10 UTC | Fix #5954 | 13 July 2022, 06:53:40 UTC |
| 1e52d43 | twiecki | 11 July 2022, 07:05:21 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config | 11 July 2022, 19:32:57 UTC |
| f1140e8 | Sandra Yojana Meneses | 11 July 2022, 11:59:09 UTC | Add docker-image workflow (#5966) * :construction_worker: add docker-image workflow * :white_check_mark: test importing pymc | 11 July 2022, 11:59:09 UTC |
| 82d7b0e | D. M. Burt | 10 July 2022, 19:04:46 UTC | Updated docstrings to inform users that ODE solution may be slow. (#5965) | 10 July 2022, 19:04:46 UTC |
| fc66057 | carlo | 10 July 2022, 13:53:30 UTC | Deprecate `assert_negative_support` (#5963) | 10 July 2022, 13:53:30 UTC |
| e96cf0a | Saurabh Chopra | 09 July 2022, 14:14:03 UTC | update docstrings in BetaBinomial class | 09 July 2022, 15:36:08 UTC |
| e7d0607 | Thomas Wiecki | 08 July 2022, 10:56:11 UTC | Bump version to 4.1.2. | 08 July 2022, 10:56:11 UTC |
| 966aabf | Ben Mares | 07 July 2022, 14:39:06 UTC | Bump Aesara to 2.7.5, aeppl to 0.0.32, update tests for aeppl (#5955) * Bump Aesara to v2.7.5 * Bump aeppl to v0.0.32 * Revert warn_missing_rvs to default value of True See https://github.com/pymc-devs/pymc/pull/5955#issuecomment-1177514485 This adapts to the change in behavior introduced in aesara-devs/aeppl#151. | 07 July 2022, 14:39:06 UTC |
| 294ff4a | Michael Osthege | 07 July 2022, 08:59:34 UTC | Workaround to suporess (some) import warnings from NumPy Co-authored-by: Ben Mares <services-git-throwaway1@tensorial.com> | 07 July 2022, 12:34:53 UTC |
| 7fe5164 | SangamSwadik | 06 July 2022, 20:03:45 UTC | correct docstrings in Binomial Class (#5952) * correct docstrings to add tensor_like * add close-figs context Co-authored-by: SangamSwadiK <sangamswadiK@users.noreply.github.com> | 06 July 2022, 20:03:45 UTC |
| dfd018e | Carl Scheffler | 06 July 2022, 09:35:33 UTC | Fix model graph node name to remove RV from end only and not the start | 06 July 2022, 19:24:58 UTC |
| ab40dcc | twiecki | 04 July 2022, 07:05:26 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config | 05 July 2022, 12:47:58 UTC |
| 58a6a02 | Moshe Looks | 05 July 2022, 08:35:32 UTC | include :: in name prefix check (#5951) * include :: in name prefix check ``` import pymc as pm with pm.Model("foo"): print(pm.Normal("foobar"), pm.Normal("baz")) ``` before: `foobar foo::baz` after: `foo::foobar foo::baz` * add a unit test | 05 July 2022, 08:35:32 UTC |
| bc8e8cf | Thomas Wiecki | 04 July 2022, 15:39:23 UTC | Bump version to 4.1.1. | 04 July 2022, 15:39:23 UTC |
| b2393d5 | Thomas Wiecki | 03 July 2022, 20:19:31 UTC | Bump aesara to 2.7.4. | 03 July 2022, 22:23:43 UTC |
| d974861 | Michael Osthege | 03 July 2022, 12:39:26 UTC | Bump to `4.1.0` | 03 July 2022, 17:28:48 UTC |
| 1d4835a | Michael Osthege | 03 July 2022, 13:29:49 UTC | Add `DeprecationWarning` to `MLDA` stepper Also see #5942 | 03 July 2022, 17:28:48 UTC |
| 8ebb6f0 | Michael Osthege | 03 July 2022, 13:23:17 UTC | Default to `pm.Data(mutable=False)` as announced | 03 July 2022, 17:28:48 UTC |
| 7fbc38f | Thomas Wiecki | 03 July 2022, 16:23:28 UTC | Add version string to conda install command. Remove jax from blackjax pip install instructions. | 03 July 2022, 17:26:46 UTC |
| c8525eb | Michael Osthege | 02 July 2022, 10:56:17 UTC | Update PR template Closes #5926 | 03 July 2022, 13:54:26 UTC |
| f8b1be6 | Michael Osthege | 02 July 2022, 10:00:37 UTC | Add release notes generation config | 03 July 2022, 13:54:26 UTC |
| 5728ad2 | Maxim Kochurov | 03 July 2022, 10:58:59 UTC | implement fix + tests (#5915) | 03 July 2022, 10:58:59 UTC |
| d9197ef | Isaac Slavitt | 30 June 2022, 19:39:23 UTC | Add numpyro install to building docs instructions Fixes #5935 | 02 July 2022, 11:33:26 UTC |
| 73a5957 | Michael Osthege | 02 July 2022, 09:45:01 UTC | Update docs build and contributing instructions (#5938) * Simplify outdated docs build script * Remove Windows docs build script It was completely outdated. Also, building docs on Windows currently fails because `pm.sampling_jax` can't be imported. * Link to contributing page in the docs Closes #5843 | 02 July 2022, 09:45:01 UTC |
| f617180 | Juan Orduz | 30 June 2022, 17:18:38 UTC | Add `_as_tensor_variable` converter for pandas objects (#5920) * Add pd.Series and pd.DataFrame support * Explicitly add pandas into requirements.txt * Add pd global import in tests Co-authored-by: Michael Osthege <michael.osthege@outlook.com> | 30 June 2022, 17:18:38 UTC |
| a568762 | danhphan | 29 June 2022, 08:03:55 UTC | Update conda environment name when running docker with jupyter notebook | 29 June 2022, 09:22:35 UTC |
| f5d3431 | Sean Patrick Santos | 25 June 2022, 19:43:52 UTC | Remove `nan_to_num` and `nan_to_high` from `find_MAP`. These functions appear to have been added due to poor handling of NaN in `scipy.optimize.minimize` for pre-1.4 versions of `scipy`. The most commonly used SciPy optimizers, including 'L-BFGS-B', were updated to handle this years ago, and it appears that these limiters are now actively harmful, since they produce extra discontinuities in the function and Jacobian passed to `minimize`. | 27 June 2022, 08:36:35 UTC |
| be048a4 | Sean Patrick Santos | 25 June 2022, 18:00:55 UTC | Correct the order of `rvs` sent to `compile_dlogp` in `find_MAP` (#5923) | 26 June 2022, 05:16:53 UTC |
| 729f79c | Oriol Abril-Pla | 23 June 2022, 17:14:31 UTC | Review docstrings checkmarcked as best practice (#5919) | 23 June 2022, 17:14:31 UTC |
| 0b4f248 | Ricardo | 21 June 2022, 07:53:22 UTC | Drop Python 3.7 and start testing on 3.10 Tests were redistributed between Python versions such that all of 3.8, 3.9, 3.10 are covered. The exact `mkl-service` version was unpinned and `mkl` was removed because the combination of pinned versions didn't support Python 3.10. The `mkl` package is already a dependency of `mkl-service` and because `mkl-service` specifies tight version limits for `mkl`, we shouldn't pin it ourselves. Closes #5209 | 22 June 2022, 14:30:15 UTC |
| 1ce7799 | Ricardo | 21 June 2022, 08:28:08 UTC | Use CACHE_NUMBER in Cache multiple paths as advertised in comment | 22 June 2022, 14:30:15 UTC |
| ebb1f0e | Ricardo | 21 June 2022, 08:23:05 UTC | Fix python-version typo in tests.yml | 22 June 2022, 14:30:15 UTC |
| 0cdd229 | Ricardo | 16 June 2022, 07:12:35 UTC | Accommodate feedback and add small section on observed variables Other changes: * Seed draws * Give more succinct tittle to last section * Fix directives | 21 June 2022, 17:51:59 UTC |
| d4e7d6b | Ricardo | 14 June 2022, 09:38:11 UTC | Update and remove size discussion | 21 June 2022, 17:51:59 UTC |
| 54352a0 | Ricardo | 05 May 2022, 16:18:04 UTC | Expand dimensionality notebook | 21 June 2022, 17:51:59 UTC |
| c492f64 | Maxim Kochurov | 20 June 2022, 17:58:59 UTC | remove references to local_rvs | 21 June 2022, 17:51:45 UTC |
| 367bdd6 | Maxim Kochurov | 20 June 2022, 17:53:35 UTC | fix the docstring and args 1. | 21 June 2022, 17:51:45 UTC |
| c120b02 | Adrian Seyboldt | 21 June 2022, 08:14:43 UTC | Small improvements to early nuts behaviour (#5824) * Use all leapfrog steps for acceptance rate * Only count positive energy errors as divergence * Copy momentum sum to be sure | 21 June 2022, 08:14:43 UTC |
| f602486 | Ricardo | 20 June 2022, 14:15:13 UTC | Install sphinx-design via conda | 20 June 2022, 21:21:44 UTC |
| 6a248e5 | Ricardo | 20 June 2022, 10:39:44 UTC | Get rid of python-version specific conda dev environments | 20 June 2022, 21:21:44 UTC |
| de4a08c | Ricardo | 20 June 2022, 10:37:38 UTC | Get rid of python-version specific conda test environments | 20 June 2022, 21:21:44 UTC |
| 027f827 | twiecki | 20 June 2022, 07:05:44 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config | 20 June 2022, 18:23:10 UTC |
| f5f964d | twiecki | 13 June 2022, 07:06:46 UTC | ⬆️ UPGRADE: Autoupdate pre-commit config | 20 June 2022, 18:23:10 UTC |
| 121a5ae | Osvaldo A Martin | 20 June 2022, 15:32:18 UTC | Remove reference to old parameters in SMC docstring (#5914) Co-authored-by: Ricardo Vieira <28983449+ricardoV94@users.noreply.github.com> | 20 June 2022, 15:32:18 UTC |
| c180ae3 | Michael Osthege | 20 June 2022, 12:27:41 UTC | Bump for `4.0.1` release | 20 June 2022, 12:48:23 UTC |
| 72ea746 | Ricardo | 20 June 2022, 11:07:43 UTC | Update passing mypy file | 20 June 2022, 12:19:47 UTC |
| 3e6949c | Ricardo | 20 June 2022, 09:48:53 UTC | Update Aesara dependency to 2.7.3 | 20 June 2022, 12:19:47 UTC |
| 403f2d5 | Danh Phan | 20 June 2022, 11:58:12 UTC | Add constant_data into sample_numpyro_nuts() (#5807) Add constant_data into sample_numpyro_nuts() Co-authored-by: Michael Osthege <m.osthege@fz-juelich.de> | 20 June 2022, 11:58:12 UTC |
