| 55857d8 | Long Ma | 18 October 2022, 20:19:26 UTC | fix test breaking | 18 October 2022, 20:19:26 UTC |
| 07cdeba | Long Ma | 06 October 2022, 19:20:39 UTC | fixed typo on doc backport message | 06 October 2022, 19:20:39 UTC |
| 31f3c0b | Long Ma | 06 October 2022, 19:19:26 UTC | backport 6.1.3 docs changes | 06 October 2022, 19:19:26 UTC |
| c18d2bf | Ken Stevens | 05 October 2022, 00:37:40 UTC | mdm message key (#4111) * begin with failing test * fixed 2 tests * fix tests * fix tests * change log Co-authored-by: Ken Stevens <ken@smilecdr.com> | 06 October 2022, 19:17:07 UTC |
| 24432c2 | Ken Stevens | 01 October 2022, 15:36:04 UTC | backport pr 4101 | 06 October 2022, 19:16:28 UTC |
| b5cf8ee | Long Ma | 06 October 2022, 15:59:00 UTC | removed duplicate mention of ver 6.1.3 in versionEnum | 06 October 2022, 15:59:00 UTC |
| 13b80f8 | markiantorno | 05 October 2022, 17:07:08 UTC | Updating version to: 6.1.3 post release. | 05 October 2022, 17:07:08 UTC |
| 172a605 | markiantorno | 05 October 2022, 16:51:43 UTC | Updating version to: 6.1.3 post release. | 05 October 2022, 16:51:43 UTC |
| e420af8 | Tadgh | 14 September 2022, 17:19:13 UTC | add backport info | 14 September 2022, 17:19:13 UTC |
| 957d3eb | Tadgh | 14 September 2022, 16:43:27 UTC | Implement bug fixes, add new tests (#4022) * Implement bug fixes, add new tests * tidy * Tidy * refactor for cleaning * More tidying * Lower logging * Split into nested tests, rename, add todos * Typo * Code review | 14 September 2022, 16:43:27 UTC |
| cded5c0 | Tadgh | 12 September 2022, 23:55:33 UTC | Bump for hapi | 12 September 2022, 23:55:33 UTC |
| a9be99a | Tadgh | 12 September 2022, 22:00:02 UTC | bump info and backport for 6.1.2 | 12 September 2022, 22:00:02 UTC |
| cc44fa7 | markiantorno | 12 September 2022, 19:45:38 UTC | Updating version to: 6.1.2 post release. | 12 September 2022, 19:45:38 UTC |
| af3fcda | Tadgh | 03 September 2022, 00:08:52 UTC | Add info of new version | 03 September 2022, 00:08:52 UTC |
| 9898be2 | Tadgh | 02 September 2022, 23:27:31 UTC | Add backport info | 02 September 2022, 23:27:31 UTC |
| a6a6e85 | Tadgh | 02 September 2022, 23:23:01 UTC | wip | 02 September 2022, 23:23:01 UTC |
| a3c4e94 | Steven Li | 02 September 2022, 20:01:11 UTC | added test case for no filter, exclude 1 patient | 02 September 2022, 23:20:21 UTC |
| 6e09eeb | Steven Li | 02 September 2022, 19:10:15 UTC | added changelog | 02 September 2022, 23:19:55 UTC |
| fe2f71b | Steven Li | 02 September 2022, 19:00:03 UTC | Implemented the fix, fixed existing unit tests | 02 September 2022, 23:19:27 UTC |
| 10223cd | Steven Li | 02 September 2022, 17:28:17 UTC | Create failing test | 02 September 2022, 23:19:08 UTC |
| 115d2c7 | Tadgh | 02 September 2022, 19:42:22 UTC | Add backport info | 02 September 2022, 19:42:22 UTC |
| dbe91f8 | Tadgh | 01 September 2022, 16:39:32 UTC | Add test, changelog, and implementation | 02 September 2022, 17:55:26 UTC |
| f79d077 | markiantorno | 18 August 2022, 20:53:14 UTC | Updating version to: 6.1.1 post release. | 18 August 2022, 20:53:14 UTC |
| 2baa190 | Tadgh | 18 August 2022, 17:36:35 UTC | Revert version enum | 18 August 2022, 17:36:35 UTC |
| 7985fa0 | Tadgh | 18 August 2022, 17:35:51 UTC | wip | 18 August 2022, 17:35:51 UTC |
| ce57c1c | Mark Iantorno | 18 August 2022, 17:33:46 UTC | Deploy to sonatype (#3934) * adding sonatype profile to checkstyle module * adding sonatype profile to tinder module * adding sonatype profile to base pom * adding final deployToSonatype profile | 18 August 2022, 17:33:46 UTC |
| 4937fb4 | Ken Stevens | 18 August 2022, 14:07:24 UTC | fix compile error | 18 August 2022, 14:07:24 UTC |
| 0ec984e | markiantorno | 18 August 2022, 06:39:36 UTC | Updating version to: 6.1.1 post release. | 18 August 2022, 06:39:36 UTC |
| f43edb2 | Tadgh | 18 August 2022, 01:06:36 UTC | Fix SP validating interceptor logic | 18 August 2022, 01:06:36 UTC |
| 7e609a7 | Tadgh | 17 August 2022, 23:57:49 UTC | Fix index online test | 17 August 2022, 23:57:49 UTC |
| 695f43d | Tadgh | 17 August 2022, 22:23:37 UTC | Fix uptests | 17 August 2022, 22:23:37 UTC |
| 40bcf65 | Tadgh | 17 August 2022, 22:14:17 UTC | wip | 17 August 2022, 22:14:17 UTC |
| 290bf96 | Tadgh | 17 August 2022, 21:23:47 UTC | Merge branch 'rel_6_1' of github.com:hapifhir/hapi-fhir into rel_6_1 | 17 August 2022, 21:23:47 UTC |
| 28b09a7 | Tadgh | 17 August 2022, 21:23:41 UTC | Fix bug and add test for SP Validating Interceptor (#3930) | 17 August 2022, 21:23:41 UTC |
| 117cb57 | Tadgh | 17 August 2022, 21:19:31 UTC | Revert fix for null/system request details checks for reindex purposes | 17 August 2022, 21:19:31 UTC |
| 8732469 | Tadgh | 17 August 2022, 17:23:06 UTC | Revert offset mode change | 17 August 2022, 17:23:06 UTC |
| 0d16fa8 | Tadgh | 16 August 2022, 21:42:55 UTC | Fix up colun grab | 16 August 2022, 21:42:55 UTC |
| cc3e7d4 | Tadgh | 16 August 2022, 20:46:10 UTC | add index | 16 August 2022, 20:46:10 UTC |
| 9e354af | TipzCM | 16 August 2022, 20:37:48 UTC | 3922 delete expunge large dataset (#3923) * lower batchsize of delete requests so that we do not get sql exceptions * blah * fix test * updated tests to not fail Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> | 16 August 2022, 20:37:48 UTC |
| d53035c | Tadgh | 16 August 2022, 19:17:27 UTC | Fix oracle non-enterprise attempting online index add (#3925) | 16 August 2022, 19:17:27 UTC |
| a6ae9f9 | Ken Stevens | 16 August 2022, 14:30:39 UTC | do not reindex searchparam jobs on startup | 16 August 2022, 14:30:39 UTC |
| c08c359 | Ken Stevens | 15 August 2022, 19:53:00 UTC | Merge remote-tracking branch 'origin/rel_6_1' into rel_6_1 | 15 August 2022, 19:53:00 UTC |
| b071b96 | Ken Stevens | 15 August 2022, 19:52:17 UTC | Initialize some beans (esp interceptors) later in the boot process so they don't slow down startup. | 15 August 2022, 19:52:17 UTC |
| bdef499 | Tadgh | 15 August 2022, 18:23:50 UTC | Offset interceptor now only works for external calls | 15 August 2022, 18:23:50 UTC |
| ca8c6e7 | Ken Stevens | 15 August 2022, 17:13:05 UTC | Gl3407 bundle offset size (#3918) * begin with failing test * fixed * change log * rollback default count change and corresponding comments Co-authored-by: Ken Stevens <ken@smilecdr.com> | 15 August 2022, 17:13:05 UTC |
| e057820 | Ken Stevens | 14 August 2022, 23:35:48 UTC | fix $mdm-submit output (#3917) Co-authored-by: Ken Stevens <ken@smilecdr.com> | 14 August 2022, 23:35:48 UTC |
| 94db12f | Tadgh | 13 August 2022, 17:36:29 UTC | Version bump | 13 August 2022, 17:36:29 UTC |
| 5267183 | JasonRoberts-smile | 13 August 2022, 11:35:38 UTC | 3915 do not collapse rules with filters (#3916) * do not attempt to merge compartment permissions with filters * changelog * Rename to IT for concurrency problems Co-authored-by: Tadgh <garygrantgraham@gmail.com> | 13 August 2022, 11:35:38 UTC |
| a6e0a91 | Tadgh | 13 August 2022, 01:24:40 UTC | Fix for caching appearing broken in batch2 for bulkexport jobs (#3912) * Respect caching in bullk export, fix bug with completed date on empty jobs * add changelog * Add impl * Add breaking test * Complete failing test * more broken tests * Fix more tests' * Fix paging bug * Fix another brittle test | 13 August 2022, 01:24:40 UTC |
| 231b9ef | Qingyixia | 13 August 2022, 00:07:04 UTC | Fix to the issue (#3855) * Fix to the issue * Progress * fixed the issue * Addressing suggestions * add response status code to MethodOutcome * Addressing suggestions Co-authored-by: Ken Stevens <ken@smilecdr.com> | 13 August 2022, 00:07:04 UTC |
| f49073d | longma1 | 12 August 2022, 18:20:42 UTC | 3379 mdm fixes (#3906) * added MdmLinkCreateSvcimplTest * fixed creating mdm-link not setting the resource type correctly * fixed a bug where ResourcePersistenceId was being duplicated instead of passed on * Update hapi-fhir-jpaserver-mdm/src/test/java/ca/uhn/fhir/jpa/mdm/svc/MdmLinkCreateSvcImplTest.java Change order of tests such that assertEquals takes expected value then actual value Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> * added changelog, also changed a setup function in test to beforeeach Co-authored-by: Long Ma <long@smilecdr.com> Co-authored-by: jdar8 <69840459+jdar8@users.noreply.github.com> | 12 August 2022, 18:20:42 UTC |
| 27659c6 | kateryna-mironova | 12 August 2022, 15:59:22 UTC | 3745 - fixed NPE for bundle with duplicate conditional create resourc… (#3746) * 3745 - fixed NPE for bundle with duplicate conditional create resources and a conditional delete * created unit test for skip of delete operation while processing duplicating create entries * moved unit test to FhirSystemDaoR4Test | 12 August 2022, 15:59:22 UTC |
| 89ce87e | Etienne Poirier | 11 August 2022, 21:11:20 UTC | 3884 overlapping searchparameter undetected rel 6 1 (#3909) * Applying all changes from previous dev branch to current one pointing to rel_6_1 * Fixing merge conflict related to Msg.code value. * Fixing Msg.code value. * Making checkstyle happy. * Making sure that all tests are passing. * Passing all tests after fixing Msg.code * Passing all tests. Co-authored-by: peartree <etienne.poirier@smilecdr.com> | 11 August 2022, 21:11:20 UTC |
| f1b5f94 | Tadgh | 11 August 2022, 19:52:35 UTC | 3899 code in limits (#3901) * Add implementation, changelog, test * Update hapi-fhir-jpaserver-test-utilities/src/test/java/ca/uhn/fhir/jpa/provider/r4/ResourceProviderR4Test.java Co-authored-by: Ken Stevens <khstevens@gmail.com> Co-authored-by: Ken Stevens <khstevens@gmail.com> | 11 August 2022, 19:52:35 UTC |
| d47c958 | Tadgh | 11 August 2022, 17:31:37 UTC | 3904 during $delete expunge job hibernate search indexed documents are left orphaned (#3905) * Add test and implementation * Add changelog | 11 August 2022, 17:31:37 UTC |
| d8dd5d7 | TipzCM | 11 August 2022, 14:39:11 UTC | updated pointcuts to work as intended (#3903) * updated pointcuts to work as intended * added changelog * review fixes Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> | 11 August 2022, 14:39:11 UTC |
| 7032ab9 | Tadgh | 10 August 2022, 12:08:10 UTC | Update for CVE (#3895) | 10 August 2022, 12:08:10 UTC |
| 686c606 | Tadgh | 08 August 2022, 17:37:28 UTC | Subscription sending delete events being skipped (#3888) * fixed bug and added test * refactor | 08 August 2022, 17:37:28 UTC |
| e95a929 | Qingyixia | 08 August 2022, 17:33:19 UTC | Implemented seventh character extended code and the corresponding dis… (#3709) * Implemented seventh character extended code and the corresponding display * Modifications * Changes on previous test according to modifications made in ICD10-CM XML file | 08 August 2022, 17:33:19 UTC |
| a60a624 | Qingyixia | 08 August 2022, 17:33:07 UTC | Fixed the issue (#3845) * Fixed the issue * Changelog modification * Changelog modification | 08 August 2022, 17:33:07 UTC |
| 131e3de | Tadgh | 06 August 2022, 16:56:12 UTC | Fix illegalstateexception when an exception is thrown during stream response (#3882) * Finish up changelog, minor refactor * reset buffer only * Hack for some replacements * Failure handling * wip | 06 August 2022, 16:56:12 UTC |
| 7e1a7e2 | JasonRoberts-smile | 04 August 2022, 22:12:59 UTC | only fast-track jobs with exactly one chunk (#3879) | 04 August 2022, 22:12:59 UTC |
| 6634234 | JasonRoberts-smile | 04 August 2022, 16:43:18 UTC | do not contrain reindex for common SP updates (#3876) | 04 August 2022, 16:43:18 UTC |
| fef8a14 | Tadgh | 04 August 2022, 14:35:33 UTC | remove RC | 04 August 2022, 14:35:33 UTC |
| 1939d74 | Tadgh | 03 August 2022, 17:57:22 UTC | Bump to RC1 | 03 August 2022, 17:57:22 UTC |
| 9dafbc8 | Tadgh | 03 August 2022, 17:55:52 UTC | Bump for CVE (#3856) * Bump for CVE * Bump spring-data version * Fix compile * Cut over to spring bom | 03 August 2022, 17:55:52 UTC |
| 5f1c50a | jdar8 | 03 August 2022, 03:51:37 UTC | everything operation with type param (#3842) * wip+test * wip, rough implementation * clean up * clean up * clean up unused methods * Completing implementation. * Removing TODO. * Replacing toList() with Collectors.toList() * support other fhir versions and everything instance * tests wip * tests for instance * Adding default methods in interface * add testsss * Removing @Deprecated. * fix spacing * changelog * reword changelog * Removing default methods from interface. * Bumping version to 6.1.0-PRE28-SNAPSHOT * Adding parameter to method call following interface modification. * Fixing documentation and parameter order for consistency. * Bumping version to PRE30. * Providing backward compatibility. * fix pom * licences * Fixing pom dependencies. * Fixing more pom dependencies. * Fixing dependencies for test-utilities. Co-authored-by: Justin_Dar <justin.dar@smilecdr.com> Co-authored-by: peartree <etienne.poirier@smilecdr.com> Co-authored-by: Ken Stevens <ken@smilecdr.com> | 03 August 2022, 03:51:37 UTC |
| e2bed96 | Nathan Doef | 02 August 2022, 13:27:02 UTC | 3776 add https support for hapi fhir cli using tls (#3777) * wip functional TODO - add tests - look at adding TLS to other RestfulClientFactory classes (FhirwebRestfulClientFactory, JaxRsRestfulClientFactory, OkHttpRestfulClientFactory) * move BaseRestServerHelper to Hapi-Fhir * - add TLS support for JaxRsClient and OkHttpClient - add tests * - to use resources and files * - ci fixes * - ci fixes * - ci fixes * - ci fixes * - refactor and tests * - ci fixes * - tests * - tests * - tests / refactor * - clean up * - changelog * - remove OkHttpClient HTTPS support * - ci * - Ken's code review changes * - Ken's code review: method renaming * - Ken's code review: javadoc * - Code coverage * - Create HapiFhirCliRestfulClientFactory to encapsulate new HTTPS functionality. Remove modifications to the FhirContext API. * - version bump * - fix unable to bind port errors by using Jetty functionality to assign random ports * Revert "- version bump" This reverts commit cfce82576aad0c64e181eb8f9baa4f7bfc433bb8. * - version bump Co-authored-by: nathaniel.doef <nathaniel.doef@smilecdr.com> | 02 August 2022, 13:27:02 UTC |
| 8740c10 | David | 29 July 2022, 17:05:55 UTC | Fix 3840 broken test (#3862) * added a paging api to ijobcoordinator * adding changelog * moved location * added a comment * Added Sort parameter to JobInstanceFetchRequest * Bump HAPI-FHIR version * Updated JPA api to include sort * Add changelog * Fix test Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: David Chen <david.chen@smilecdr.com> | 29 July 2022, 17:05:55 UTC |
| be0b6f1 | David | 29 July 2022, 15:12:53 UTC | 3840 add sort parameter to fetching jobs (#3861) * added a paging api to ijobcoordinator * adding changelog * moved location * added a comment * Added Sort parameter to JobInstanceFetchRequest * Bump HAPI-FHIR version * Updated JPA api to include sort * Add changelog Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: David Chen <david.chen@smilecdr.com> | 29 July 2022, 15:12:53 UTC |
| f933ff3 | longma1 | 29 July 2022, 14:58:40 UTC | 2878 mdm mongo support (#3748) * small refactor * refactored MDM module to use iterface IMDMLink, refactored MDMLink to use ResourcePersistenceId wrapper rather than pid as long * removing IJpaIdHelperService and refactor IIdHelperService * fixed bugs for GoldenResourceMergerSvcImpl and FindCandidateByExampleSvc * changes to IIdHelperService * move MdmSearchParamSvc and MdmSubmitSvcImpl out of jpaserver-mdm * moved JpaResourceLoader to hapi-fhir-storage, renamed to ResourceLoaderImpl * added error Msg code, removed Fixme * fixed error code, update last used code in Msg.java to 2083 * fixed accidentally throwing unprocessableentityException * added MdmLinkExpandSvc interface * build adding license to files * MdmLinkdao refactor * fix build * mdm config refactoring * MdmStorageInterceptor and IExpungeEverythingService changes * fix bug where a pid is converted to ResourcePersistenceId twice * minor refactor to IMdmLink, change id from long to ResourcePersistenceId * changed PageImpl to Page interface * refactor MdmSearchExpandingInterceptor to use interface * fixed missed refactor where the resourcePersistenceId is still assumed to be long * resolve test failures resulting from merging master * changed conflicting exception code * fixed issue with bulk export wrapping resourcePid inside resourcePersistenceId * added IMdmLinkImpl to MdmSettings * fixed missing import in IdHelperService from merging master * fixed MdmLinkDaoSvcTest importing wrong MdmLinkTuple * restored JpaIdHelperService and added changelog * modified msg.code to non-duplicate * code review changes * refactored some bulk export batch 2 files to accomodate change in beans being exported * fixed jpa bulk export failing tests * removed duplicate bean declaration of MdmLinkImplFactory in BaseMdmR4Test * merged master and bump version to pre25 * extracted expungeEverythingByType to IExpungeEverythingService * fixed wiring issue * messed up merging pom with master * fixed broken changelog Co-authored-by: Long Ma <long@smilecdr.com> Co-authored-by: Samuel Lee <samuel.lee@smilecdr.com> Co-authored-by: Ken Stevens <ken@smilecdr.com> | 29 July 2022, 14:58:40 UTC |
| 8346c02 | jmarchionatto | 29 July 2022, 13:23:34 UTC | Issue 3804 application fails to start 610 pre14 snapshot with beandefinitionoverrideexception invalid bean definition with name loadidsstep (#3819) * shared steps * Add changelog * Rename as suggested * Remove unnecessary bean * Add missing imports * Remove parent class not used anymore Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> | 29 July 2022, 13:23:34 UTC |
| 5586b32 | jmarchionatto | 28 July 2022, 23:09:31 UTC | Issue 3857 elastic lucene search returns only 50 results when offset0 and count100 (#3858) * Add logback definition to project to stop debugging all output * Fix limit definition to include _offset=0 case * Move test required resources from previous test module * Add changelog Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> | 28 July 2022, 23:09:31 UTC |
| d5a69d8 | Etienne Poirier | 28 July 2022, 20:07:58 UTC | 3859 hapi fhir doc snippet link referring a file as opposed to classpath (#3860) * Using snippet type of classpath as opposed to file. * Modifying documentation. Co-authored-by: peartree <etienne.poirier@smilecdr.com> | 28 July 2022, 20:07:58 UTC |
| 9a1d6f3 | TipzCM | 27 July 2022, 18:50:42 UTC | 3821 term code system batch jobs (#3826) * step one * blah * no working test * updated existing tests * delete code system version and code system jobs * trying to get terminology fixed * updating tests * need to have some movement * added completion handler * added clearing code for failsafe * review points * fixing tests * fixing tests * more test fixes * fixing more tests * review fixes * todo Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> | 27 July 2022, 18:50:42 UTC |
| d405fa1 | Etienne Poirier | 27 July 2022, 12:45:59 UTC | 3792 providing capability to alter source resource content before mdm matching (#3802) * Solution baseline. * Adding integration test. * Parameterizing the test * Adding to documentation. * Modification following code review. * Modification following code review. * Adding documentation. * Adding documentation specific to MDM customization with pointcut. * Modifications following second code review. * Code review modifications. Co-authored-by: peartree <etienne.poirier@smilecdr.com> | 27 July 2022, 12:45:59 UTC |
| 59540ce | TipzCM | 26 July 2022, 17:29:37 UTC | 3813 paging job coordinator (#3814) * added a paging api to ijobcoordinator * adding changelog * moved location * added a comment * blah Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> | 26 July 2022, 17:29:37 UTC |
| 533019f | Ken Stevens | 25 July 2022, 22:41:01 UTC | Response Terminology Wiring (#3807) * cleaned up response terminology wiring * jpa is failing atm * bump pom versions * double build RAM * bump hapi version to PRE-22 * license headers * re-bump to PRE-22 * tag intermittent Co-authored-by: Ken Stevens <ken@smilecdr.com> | 25 July 2022, 22:41:01 UTC |
| f01e4a7 | Ken Stevens | 25 July 2022, 15:47:31 UTC | Remote Terminology support refactor (#3822) * Revert "test passes with a lot of copy/paste" This reverts commit f2f28e22ef467f0c7dd512152ee68d73385f3b75. * make translateOutcomeToResults public * double RAM * final consolidation. move shared code out to static utility methods * revert azure memory disable jacoco on jpaserver test prokect * bump hapi version * rebump hapi to PRE-21 * licenses Co-authored-by: Ken Stevens <ken@smilecdr.com> | 25 July 2022, 15:47:31 UTC |
| 611c1d9 | Ken Stevens | 25 July 2022, 06:59:49 UTC | enable partition-aware subscription activation (#3844) Co-authored-by: Ken Stevens <ken@smilecdr.com> | 25 July 2022, 06:59:49 UTC |
| 6d9bbbe | Tadgh | 22 July 2022, 19:24:59 UTC | Add support for deletes to stu3/dstu2 subscriptions. (#3836) * Add support for DSTU3 delete subscrion events, add test * Add changelogP | 22 July 2022, 19:24:59 UTC |
| cbcf3f1 | Nathan Doef | 22 July 2022, 17:12:07 UTC | 3829 Fix Subscriptions created with package installer and partitioning enabled bug (#3830) * - failing test + increase existing code coverage * - fix: use RequestPartitionId.defaultPartition() to handle malformed default partitions * - changelog * - typo | 22 July 2022, 17:12:07 UTC |
| d2fd098 | Etienne Poirier | 22 July 2022, 15:55:44 UTC | 3820 Providing an exception for search request with invalid or incomplete tokenParam (#3825) * Creating an exception to be raised when searching for _tag/_provide/_security where the associated tokenParam is not properly formatted. * Adding changelogs. * Adding integration test. * Rewording ChangeLog. * Rewording exception message. * Addressing code review comments. * Addressing code review comments. * Bumping hapi-fhir version to 6.1.0-PRE20-SNAPSHOT * Modifications to pass checkstyle. Co-authored-by: peartree <etienne.poirier@smilecdr.com> | 22 July 2022, 15:55:44 UTC |
| 0a1e782 | Tadgh | 22 July 2022, 01:56:27 UTC | 3817 enhance subscription before message delivery (#3824) * Add changelog * implementation and changes * collection implementation * tidy | 22 July 2022, 01:56:27 UTC |
| f5697e1 | JasonRoberts-smile | 21 July 2022, 19:26:15 UTC | 3755 use batch2 job after search parameter change (#3806) * broke some tests * invoke batch 2 reindex * changelog * fix compile error after merge * fix failing test * hook up partition support * fix some failing tests * deprecate the old reindex service * fix more failing tests * fix broken test | 21 July 2022, 19:26:15 UTC |
| 85384fe | Ken Stevens | 21 July 2022, 17:12:19 UTC | separate elastic tests into their own project (#3827) * move elastic tests out into their own project in the hopes it solves ci memory issues * move elastic tests out into their own project in the hopes it solves ci memory issues * disable elastic tests temporarily Co-authored-by: Ken Stevens <ken@smilecdr.com> | 21 July 2022, 17:12:19 UTC |
| e5cc727 | jmarchionatto | 20 July 2022, 17:24:49 UTC | Document the need to reindex when enabling full resource storage with indexed resources. (#3815) Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> | 20 July 2022, 17:24:49 UTC |
| 599f513 | Ken Stevens | 20 July 2022, 14:40:37 UTC | fix checkstyle | 20 July 2022, 14:40:37 UTC |
| f2f28e2 | Ken Stevens | 20 July 2022, 01:02:16 UTC | test passes with a lot of copy/paste | 20 July 2022, 01:02:16 UTC |
| 67e67bb | jmarchionatto | 19 July 2022, 14:00:28 UTC | Issue 3804 application fails to start 610 pre14 snapshot with beandefinitionoverrideexception invalid bean definition with name loadidsstep (#3805) * shared steps * Add changelog Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> | 19 July 2022, 14:00:28 UTC |
| 5921907 | Qingyixia | 18 July 2022, 01:26:34 UTC | Implement patch in mongo db (#3781) * Not the final version * Support PATCH operation * minor modifications * minor modifications * Final version * Final version * Version Bump * bump version again Co-authored-by: Ken Stevens <ken@smilecdr.com> | 18 July 2022, 01:26:34 UTC |
| 8ed0a18 | TipzCM | 17 July 2022, 21:49:03 UTC | 3531 implement bulk processors (#3566) * base batch2 bulk export steps - unimplemented * added the basic steps * adding tests * we have added the tests * added tests for bulk export stages * implementing jpa * 3531 adding the jpabukexportprocessorimplementation * 3531 first step for mongo bulk export * jpa stuff updated * 3531 hapi fhir stuff * trying to fix up tests * fixing test * fixed most tests in batch export * deprecate * need some more guidance here * fixing some tests * some steps taken * blah * stashing * test * fixing tests round 1 * many a changes * updating version * small updates * merging in mster again * fixing up serialization * added the permission checkers * cleanup and sonarkube crap * some more tests * updating adding tests * crimes * blah * updatingmsg number again * removal of commented code * cleanup * merge confflicts * fixing msg * review fixes round 1 * more review fixes * merging in master * fixing poms * review points * test fix * test fix * fix test race condition * truncate error * add stack trace to error * rename to IT * fix race condition in test * finally fixed race condition in test. this time I'm optimistic hapi ci will finally pass * fix mock test. not a fan of mock tests like this. * any job definition with a reducer step must be gated. * fixed common batch bean wiring * fix test * lazy init ResponseTerminologyTranslationSvc * change the way we lazy init ResponseTerminologyTranslationSvc * change the way we lazy init ResponseTerminologyTranslationSvc (for the third time. this is super tricky!) * disabling testGoldenResourceWithCircularReferenceCanBeCleared for now Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: Ken Stevens <ken@smilecdr.com> | 17 July 2022, 21:49:03 UTC |
| 398ed99 | jmarchionatto | 15 July 2022, 18:04:12 UTC | Hsearch no scroll queries (#3799) * Avoid scrolling result for not-asynchronous searches * Adjust deprecated properties * Add changelog Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> | 15 July 2022, 18:04:12 UTC |
| 0c64427 | TipzCM | 15 July 2022, 16:42:46 UTC | 3770 fix batch2 failure loop (#3779) * 3770 fixing error handling * some updates to error handling * changelog * blah * bumping version * fix test failures * code review points * review points * add retry test * assert counts in the test * test fixes Co-authored-by: leif stawnyczy <leifstawnyczy@leifs-MacBook-Pro.local> Co-authored-by: Ken Stevens <ken@smilecdr.com> | 15 July 2022, 16:42:46 UTC |
| ab4d957 | Tadgh | 15 July 2022, 16:29:16 UTC | Make patch `add` actually add instead of replace. (#3800) * Fix some patch problems * Changelog | 15 July 2022, 16:29:16 UTC |
| e0169fa | Mark Iantorno | 15 July 2022, 15:10:26 UTC | Adding autoclosing for sonatype publishing (#3798) | 15 July 2022, 15:10:26 UTC |
| 98cce2a | jmarchionatto | 14 July 2022, 19:21:43 UTC | 3664 fast elastic load (#3769) * Start direct HSearch path * Support no HSearch * Spike out the direct resource query * Implement hsearch fast load * Fix last master merge in issues * Implement revision requests * Test direct resources (no IDs query) sorting * Use mock to count freetext searches to avoid implementing interface in test * Remove fixme * Make listener optional as it is used only for tests * Provide new dependency * Widen fast path test scope and fix previously untested configurations * Make method transactional as it can be called from outside a TX (at least testObservationLastNAllParamsPopulated does) * Update test validation Co-authored-by: Michael Buckley <michael.buckley@smilecdr.com> Co-authored-by: juan.marchionatto <juan.marchionatto@smilecdr.com> | 14 July 2022, 19:21:43 UTC |
| 5575e72 | jdar8 | 14 July 2022, 18:41:36 UTC | 3788 FHIR patch on soft deleted resource undeletes resource (#3789) * failing test * fix * refactor * refactor * changelog * changelog * Update hapi-fhir-docs/src/main/resources/ca/uhn/hapi/fhir/changelog/6_1_0/3788-fix-fhir-patch-on-soft-deleted-resources.yaml Co-authored-by: jmarchionatto <60409882+jmarchionatto@users.noreply.github.com> Co-authored-by: Justin_Dar <justin.dar@smilecdr.com> Co-authored-by: jmarchionatto <60409882+jmarchionatto@users.noreply.github.com> | 14 July 2022, 18:41:36 UTC |
| 05ebf02 | Tadgh | 14 July 2022, 16:01:44 UTC | 3790 remove legacy search builder (#3791) * Remove legacy SB * Add changelog * Fix more messages * Fix missed hapi message * Fix up more messages | 14 July 2022, 16:01:44 UTC |
| 94a1cda | michaelabuckley | 13 July 2022, 17:32:40 UTC | Fix sort in hsearch - use full millis (#3787) Fix sort in hsearch - use full millis | 13 July 2022, 17:32:40 UTC |
