https://github.com/GPflow/GPflow

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6ebe0c6 update density tests 07 March 2018, 16:05:03 UTC
1fa2fb4 change copy paste error x has to be changed to mu on line 94 07 March 2018, 16:02:44 UTC
ad97bf4 Clarify user messages. 07 March 2018, 15:41:31 UTC
ba69996 Copy original docstring always 07 March 2018, 15:30:43 UTC
d15e445 add ``` 07 March 2018, 10:21:06 UTC
80b82c5 Merge pull request #656 from GPflow/hugh/fix_triangular_transform fix consistency of triangular transform 06 March 2018, 21:46:25 UTC
9d04e3d docstrings in LowerTriangular transform, with help from Artem 06 March 2018, 18:15:36 UTC
3bf5314 Merge branch 'master' into hugh/fix_triangular_transform 06 March 2018, 17:59:21 UTC
7e8dc9f Adds rational-quadratic kernel and minor clean-up of notation (#666) * (square|euclid)_dist -> scaled_(square|euclid)_dist to make clear that it is already divided by lengthscale * add RationalQuadratic kernel * SquaredExponential * add test case * reoder * add DeprecationWarnings * improve docstrings * space * add no-cover pragmas for deprecated methods 05 March 2018, 19:41:14 UTC
1e0b45b fix typo in docstring 04 March 2018, 14:34:59 UTC
5ce105f improving dosctrings for LowerTriangular transform 02 March 2018, 16:10:31 UTC
91e6e65 tidy up decorators 02 March 2018, 10:03:15 UTC
785c537 keep original __init__'s docstring for Node subclasses 02 March 2018, 10:03:00 UTC
f9eeb64 Merge branch 'hugh/fix_triangular_transform' of github.com:GPflow/GPflow into hugh/fix_triangular_transform 28 February 2018, 11:46:58 UTC
4ed6aa5 even more triangular_transform tests 28 February 2018, 11:43:03 UTC
9e7cd3f Merge branch 'master' into hugh/fix_triangular_transform 28 February 2018, 10:00:54 UTC
47d119d more tests for lowerTriangular transofrms 28 February 2018, 09:59:45 UTC
8fac3c4 Corrected the PCA implementation (#661) 27 February 2018, 17:02:09 UTC
5809cb0 updating triangular transforms (no longer flat) 26 February 2018, 17:08:53 UTC
fa79152 started combination optimizer 23 February 2018, 13:01:45 UTC
c61a002 Small fixes in natgrads module. 23 February 2018, 12:03:59 UTC
49a8be4 added test and applied flattening 22 February 2018, 19:10:34 UTC
6c43de1 fixed squeezing bug in LowerTriangular transform (#654) 21 February 2018, 17:27:10 UTC
830858e remove conditional shape changes from multivariate_normal 21 February 2018, 12:19:10 UTC
bc2de16 Small typo 19 February 2018, 12:03:05 UTC
d0f5fe8 updating contributing page 19 February 2018, 09:40:20 UTC
cddb34b Merge branch 'master' of github.com:GPflow/GPflow 19 February 2018, 09:38:04 UTC
1ffbcd2 Add NatGradOptimizer. 19 February 2018, 09:36:28 UTC
e055218 fixed merge conflicts in the notebooks (#649) 18 February 2018, 11:03:32 UTC
0eaa40d Refactor index & naming rules. (#645) * shows short info about gpflow object. * Remove hidden names from core parentable class. * Intermediate result. * Add distinguishable pathname. * Refactor indices generation, parentable naming managment. * Transitioning to new indixes. * Rename full_name property on pathname. * Fixing tests. * Travis ignore user warnings. * Increase timeout notebook. * Tests for parentable cases. * Remove Node __repr__. * Renaming for build_name and build_pathname. Add deprication for full_name property. * Adding tests for depricated function. 13 February 2018, 22:11:51 UTC
a8f487a Some more Parameter inits respect default parameters. (#647) 08 February 2018, 13:01:45 UTC
d1ac7b8 Expectations speedup and refactoring: * new implementations of RBF and Linear kernel expectations as well as the RBF-Linear cross kernel expectation * more efficient mean function expectation handling * Streamline quadrature expectations and unified the expectations files * clearer distinction between quadrature_expectation and expectation which makes @quadrature_fallback superfluous * "Private" _expectation methods are kept private * Improve handling of Sum kernels (with 1 bug fixed on when cross expectations simplify) * switch to assert_allclose instead of the less advisable assert_almost_equal * switch around (feat, kern) to (kern, feat) in expectations for consistency * improve test coverage and reduced error tolerance * add, correct and improve docstrings * make covariance name consistent for all Gaussian probability_distributions: p.cov * add shape inference for guassian covariances 07 February 2018, 14:00:17 UTC
da01a3f Merge pull request #636 from ialong/pandas_reindex remove reindex_axis call in pretty_pandas_table 31 January 2018, 16:54:44 UTC
d8984b1 Minimize function for NatgradOptimizer. 29 January 2018, 17:49:17 UTC
1728765 Add natural optimizer. 29 January 2018, 17:46:11 UTC
52c222b remove deprecated .reindex_axis() and refactor variable names 29 January 2018, 16:16:27 UTC
d25eb15 fix vector handling and broadcasting in multivariate_normal density (#627) * fix vector handling and broadcasting in multivariate_normal density * change GPR to sum over likelihood values * add docstrings 24 January 2018, 19:32:04 UTC
2742332 Merge pull request #622 from GPflow/awav/documentation-update Update docstrings for core stuff. 23 January 2018, 17:25:18 UTC
71f7bef Merge branch 'master' into awav/documentation-update 23 January 2018, 16:59:12 UTC
8b7f36e Merge pull request #632 from GPflow/vincent/pickling Vincent/pickling 23 January 2018, 16:38:57 UTC
6d7c0f9 Merge branch 'master' into vincent/pickling 23 January 2018, 16:13:30 UTC
e23df44 Minor fix to allow unpickling models 23 January 2018, 16:12:11 UTC
9b13309 Update README.md to contain reference to gpflow-monitor (#623) 22 January 2018, 17:30:47 UTC
f2c8127 Merge branch 'master' into awav/documentation-update 19 January 2018, 18:21:05 UTC
ab0e2ab Merge pull request #621 from GPflow/awav/expectation-tests-clearance Expectation test clearance along with new test features. 17 January 2018, 22:33:55 UTC
cdf299a Remove unnecessary comments in Expectation tests. 16 January 2018, 22:31:08 UTC
db0f421 Merge branch 'master' into awav/expectation-tests-clearance 16 January 2018, 16:47:29 UTC
5f2a6d4 Gradient of `sqrt(RBF(Z, Z))` no longer NaN (#615) * Gradient of `sqrt(RBF(Z, Z))` no longer NaN Before this commit, `Kmms = sqrt(exp(-1/x)) = exp(-1/(2x))`. These two expressions are equivalent mathematically. However, they are not equivalent when it comes to computing finite-precision gradients (dKmms/dx) via backpropagation when `Kmms**2 == 0.0`. Thus, we change sqrt(exp(-1/x)) to exp(-1/(2x)). This solves #595 in the expectations framework. * Removed test for NaN gradients of eKxzKz 16 January 2018, 12:01:37 UTC
b9d40db Merge branch 'master' into awav/documentation-update 15 January 2018, 14:54:44 UTC
22272ea Clarify read index method. 15 January 2018, 14:51:11 UTC
33083a8 Merge branch 'master' into awav/expectation-tests-clearance 15 January 2018, 14:07:56 UTC
8e9a681 Merge branch 'master' of github.com:GPflow/GPflow 10 January 2018, 11:02:04 UTC
a75f24a improvements and clarifications to the handling of num_latent (#609) * improvements and clarifications to the handling of num_latent. Also fizes the coregion notebook * removing leftover debug lines * adding a regression test for the wrong number of latent functions in a switched likelihood * Pass num_latent to GPModel in SGPMC * Pass num_latent to GPModel in GPMC * Pass num_latent to GPModel in SVGP * Removed ignore notebooks argument in travis config * Let codecov ignore the doc notebooks 08 January 2018, 13:21:07 UTC
a0c0227 Merge pull request #612 from GPflow/qsqrt-order `q_sqrt` is now D x M x M. 06 January 2018, 17:29:18 UTC
2bfbaee Convert numbers to tensors explicitly. 06 January 2018, 16:13:54 UTC
5d63ecd Add auxilary functions at test_util. Untie expectation tests from single graph usage. 06 January 2018, 15:55:45 UTC
4dc651f `q_sqrt` is now D x M x M. 05 January 2018, 15:30:16 UTC
a1d1516 improvements and clarifications to the handling of num_latent. Also fizes the coregion notebook 04 January 2018, 16:28:15 UTC
1342c28 Merge pull request #607 from GPflow/awav/awav-backward-tensors Missing part in transform - backward_tensor 04 January 2018, 11:15:29 UTC
b84c44e Merge branch 'master' into awav/awav-backward-tensors 04 January 2018, 11:02:09 UTC
4827068 Expectations framework (#591) * Outline of new expectations code. * Quadrature code now uses TensorFlow shape inference. * General expectations work. * Expectations RBF kern, not tested * Add Identity mean function * General unittests for Expectations * Add multipledispatch package to travis * Update tests_expectations * Expectations of mean functions * Mean function uncertain conditional * Uncertain conditional with mean_function. Tested. * Support for Add and Prod kernels and quadrature fallback decorator * Refactor expectations unittests * Psi stats Linear kernel * Split expectations in different files * Expectation Linear kernel and Linear mean function * Remove None's from expectations api * Removed old ekernels framework * Add multipledispatch to setup file * Work on PR feedback, not finished * Addressed PR feedback * Support for pairwise xKxz * Enable expectations unittests * Renamed `TimeseriesGaussian` to `MarkovGaussian` and added tests. * Rename some variable, plus note for later test of <x Kxz>_q. * Update conditionals.py Add comment * Change order of inputs to (feat, kern) * Stef/expectations (#601) * adding gaussmarkov quad * don't override the markvogaussian in the quadrature * can't test * adding external test * quadrature code done and works for MarkovGauss * MarkovGaussian with quad implemented. All tests pass * Shape comments. * Removed superfluous autoflow functions for kernel expectations * Update kernels.py * Update quadrature.py 03 January 2018, 17:44:53 UTC
2182bf0 Merge pull request #604 from GPflow/awav/notebook-tests Notebook test clearance. 03 January 2018, 15:41:39 UTC
72a5d55 Small fix in transform tests. 02 January 2018, 19:59:37 UTC
cef4917 Fix typo in trasform tests. 02 January 2018, 19:45:50 UTC
e271730 Travis artful distribution is not available. 02 January 2018, 19:44:06 UTC
c1d9de3 Transform backward tensors. 02 January 2018, 19:40:39 UTC
8a80103 Add backward methods for LowerTriangular and Diagonal. 02 January 2018, 19:07:09 UTC
968e43b Add backward tensors. 01 January 2018, 21:06:48 UTC
1d458c3 Docstrings for core/parentable.py 31 December 2017, 14:59:35 UTC
09d4b14 Docstrings for core/node.py module. 31 December 2017, 13:19:06 UTC
35bee19 Add ignore for vscode folder. 29 December 2017, 20:25:29 UTC
786d0ab Add ignore for vscode folder. 29 December 2017, 20:23:32 UTC
69893a7 Docs for compilable.py 29 December 2017, 20:21:42 UTC
7ba6ece 'artful' distribution is not supported by Travis CI. 28 December 2017, 18:53:51 UTC
9a87bd7 Resolve conflicts left by previous merges. 27 December 2017, 12:33:56 UTC
e54e862 Simplify notebook tests. 27 December 2017, 12:10:31 UTC
02d5d09 Add documentation. First attempts clarify things in compilable interface. 17 December 2017, 17:01:52 UTC
140a53c Merge pull request #592 from GPflow/awav/pandas-pretty-printing Pandas Model/Parameters printing. 14 December 2017, 09:49:06 UTC
d0937b2 Merge branch 'master' into awav/pandas-pretty-printing 13 December 2017, 20:38:23 UTC
3c78e4f Merge pull request #596 from GPflow/remove_likelihood_checks removed _check_targets 11 December 2017, 01:28:40 UTC
01d0a7a Update notebooks from master branch. 10 December 2017, 23:55:21 UTC
b6ff40e removed _check_targets 10 December 2017, 22:16:11 UTC
158af0e Re-run notebooks with new printing. 08 December 2017, 22:39:28 UTC
186419c Cover pandas printing for Parameter, DataHolder and Parameterized instances. 08 December 2017, 22:08:53 UTC
6582f41 Merge pull request #586 from GPflow/awav/replace-tf-float-and-int Standardize float type 08 December 2017, 02:39:53 UTC
cfa59ce Merge branch 'master' into awav/replace-tf-float-and-int 08 December 2017, 02:29:21 UTC
e67b457 Tests for deprecation messages. 07 December 2017, 21:41:14 UTC
81c4b55 Use new pandas tables in notebooks. 07 December 2017, 20:28:56 UTC
e923230 Merge pull request #589 from GPflow/awav/documentation Documentation fixes. 07 December 2017, 16:55:09 UTC
22f450d Merge branch 'master' into awav/documentation 07 December 2017, 00:00:17 UTC
0ef8e3d Remove redundant destination string for comparison. 06 December 2017, 23:28:29 UTC
f413633 Parameter representation returns str type. 06 December 2017, 23:17:04 UTC
e153901 Pretty printing using pandas structure. 06 December 2017, 16:49:34 UTC
8a1376b Merge master into branch. Resolve conflicts. 05 December 2017, 14:29:24 UTC
942fe22 Rename np_float[int] to float[int]_type. 05 December 2017, 00:19:41 UTC
f70e2dc Merge branch 'master' into awav/replace-tf-float-and-int 04 December 2017, 19:33:04 UTC
c3d5f28 Improve nomenclature (issue #504) (#570) * improve kernel nomenclature #504 * add deprecation errors for renames * give uncertain_conditional explicit kwargs as well * conditional(..., whiten=...) -> conditional(..., white=...) * updates to regression notebook 04 December 2017, 11:54:56 UTC
c951c3a Fixes for notebooks. Renaming feat => feature. 04 December 2017, 09:41:08 UTC
e5b8cfe Small spelling 02 December 2017, 10:34:11 UTC
79e0815 Clarify variables naming at assign Parameter's method. 01 December 2017, 10:54:37 UTC
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