913bfe3 | James Hensman | 27 April 2018, 08:12:54 UTC | Minor clean-up * removing old notebooks dir * add symbolic link to notebooks | 27 April 2018, 08:12:54 UTC |
f31223c | James Hensman | 26 April 2018, 13:53:52 UTC | Merge pull request #731 from GPflow/jameshensman-tidy1 removing errant file | 26 April 2018, 13:53:52 UTC |
c7acc2f | James Hensman | 26 April 2018, 13:28:03 UTC | removing errant file | 26 April 2018, 13:28:03 UTC |
5e841b7 | Artem Artemev | 19 April 2018, 14:24:02 UTC | Model saver (#660) GPflow model saver. Supports native GPflow models and provides an interface for defining custom savers for user's models. Saver stores GPflow structures and pythonic types as numpy structured arrays and serializes them using HDF5. | 19 April 2018, 14:24:02 UTC |
2fb4b6d | Artem Artemev | 17 April 2018, 14:24:05 UTC | Merge pull request #723 from GPflow/awav/fix-pytest-import Pytest used by test_util module | 17 April 2018, 14:24:05 UTC |
26254a2 | Artem Artemev | 17 April 2018, 13:54:02 UTC | Bump patch version to 1.1.1 | 17 April 2018, 13:54:02 UTC |
753aa2e | Artem Artemev | 17 April 2018, 13:53:21 UTC | pytest must be included as a dependency | 17 April 2018, 13:53:21 UTC |
8a412f6 | Artem Artemev | 12 April 2018, 10:05:11 UTC | Merge pull request #713 from GPflow/awav/github-templates GitHub PR and issue templates. | 12 April 2018, 10:05:11 UTC |
46c8784 | Artem Artemev | 12 April 2018, 09:24:05 UTC | Python code block as an example. | 12 April 2018, 09:24:05 UTC |
e3aba01 | Artem Artemev | 12 April 2018, 09:22:12 UTC | Merge branch 'awav/github-templates' of github.com:GPflow/GPflow into awav/github-templates | 12 April 2018, 09:22:12 UTC |
ec43181 | Artem Artemev | 12 April 2018, 09:22:02 UTC | Content table had broken links | 12 April 2018, 09:22:02 UTC |
ee5c897 | Artem Artemev | 12 April 2018, 09:08:21 UTC | Merge branch 'master' into awav/github-templates | 12 April 2018, 09:08:21 UTC |
eb6a269 | Artem Artemev | 12 April 2018, 09:08:00 UTC | Merge pull request #714 from GPflow/awav/optimizers-fix Optimizers incompatibility with TensorFlow >= 1.6 | 12 April 2018, 09:08:00 UTC |
c5f8520 | st-- | 11 April 2018, 23:13:12 UTC | Update ISSUE_TEMPLATE.md | 11 April 2018, 23:13:12 UTC |
9ccf2b4 | st-- | 11 April 2018, 23:11:35 UTC | Update ISSUE_TEMPLATE.md | 11 April 2018, 23:11:35 UTC |
d15a401 | Artem Artemev | 11 April 2018, 22:14:37 UTC | Change tensorflow version on 1.6 | 11 April 2018, 22:14:37 UTC |
745dcf8 | Artem Artemev | 11 April 2018, 22:01:29 UTC | Bump tensorflow version requirement to 1.5 | 11 April 2018, 22:01:29 UTC |
5e57df5 | Artem Artemev | 11 April 2018, 21:34:46 UTC | TensorFlow optimize initilizer. | 11 April 2018, 21:34:46 UTC |
d05309e | Artem Artemev | 11 April 2018, 20:00:19 UTC | Fixes after code review. | 11 April 2018, 20:20:35 UTC |
ebc8d56 | Artem Artemev | 11 April 2018, 16:01:55 UTC | Merge branch 'awav/github-templates' of github.com:GPflow/GPflow into awav/github-templates | 11 April 2018, 16:01:55 UTC |
96e918d | st-- | 11 April 2018, 16:00:43 UTC | Update contributing.md | 11 April 2018, 16:00:43 UTC |
a6f48fa | Artem Artemev | 11 April 2018, 15:31:36 UTC | Fix typo. | 11 April 2018, 15:31:36 UTC |
1c5c7fb | st-- | 11 April 2018, 15:27:13 UTC | Update README.md Small changes inline | 11 April 2018, 15:27:13 UTC |
6d58de8 | st-- | 11 April 2018, 15:23:32 UTC | Update PULL_REQUEST_TEMPLATE.md Small changes inline | 11 April 2018, 15:23:32 UTC |
28e043c | Artem Artemev | 11 April 2018, 15:10:17 UTC | Brushing up parts of PR template. | 11 April 2018, 15:10:17 UTC |
6d5e10d | Artem Artemev | 11 April 2018, 14:34:36 UTC | Compatibility section in README.md | 11 April 2018, 14:34:36 UTC |
ea4f07d | Artem Artemev | 11 April 2018, 14:19:34 UTC | Modify contributing.md file and add github templates. | 11 April 2018, 14:19:34 UTC |
f5d8cc4 | Guido Kraemer | 04 April 2018, 11:10:45 UTC | Name attribute for Gaussian likelihood. | 04 April 2018, 11:10:45 UTC |
70f18c1 | st-- | 04 April 2018, 10:13:53 UTC | allow params_as_tensors_for() to take several objects as varargs (#672) Allow params_as_tensors_for() to take several objects as varargs | 04 April 2018, 10:13:53 UTC |
455a71f | Artem Artemev | 04 April 2018, 08:27:29 UTC | Merge pull request #701 from ialong/expectations expectations: pass num hermite points to _expectation() and minor cleaning | 04 April 2018, 08:27:29 UTC |
731c5dc | Artem Artemev | 04 April 2018, 08:02:40 UTC | Merge branch 'master' into expectations | 04 April 2018, 08:02:40 UTC |
919ea6f | Artem Artemev | 03 April 2018, 22:32:39 UTC | Docstring updates. | 03 April 2018, 22:32:39 UTC |
29fe092 | Adrià Garriga | 03 April 2018, 22:18:10 UTC | Fixed regression to bug in #615 (#700) * Fixed regression to bug in #615 Refactoring `expectations.py` re-introduced the bug fixed by #615, for which we decided to not introduce a test. This contains the bug fix and the test. * Removed magic number, rewrote test to convention, removed unused import Basically incorporated all of @awav's suggestions + removed an unused import. | 03 April 2018, 22:18:10 UTC |
f076951 | Alessandro Davide Ialongo | 28 March 2018, 16:45:06 UTC | expectations: pass num hermite points to _expectation() and minor cleaning | 03 April 2018, 17:06:16 UTC |
16570be | Artem Artemev | 29 March 2018, 10:51:23 UTC | NatGrads notebook cleanup (#696) * added notebook * added callback to first example * Clean up Natural Gradients notebook. * Final change in NatGrads notebook. * Address PR review. Typo in conjugate case. Likelihood printing. * Conjugate to non-conjugate. | 29 March 2018, 10:51:23 UTC |
e2acd61 | Hugh Salimbeni | 28 March 2018, 11:10:42 UTC | Natural gradients notebook (#691) * added notebook * added callback to first example | 28 March 2018, 11:10:42 UTC |
c283fec | Artem Artemev | 27 March 2018, 10:27:17 UTC | GPflow Actions. (#678) * Action initials. * Introducing actions. * Change implicit interfaces for an optimizer. * Add simple action tests. * Natural gradient integration. * Unify natural gradient optimizer interface. * Fix NatGradOptimizer test. * Forgot to add actions.py file. | 27 March 2018, 10:27:17 UTC |
f3fe7da | ADAM | 26 March 2018, 13:21:04 UTC | Update gauss_kl to work with K matrices of shape L x M x M (previously M x M only) (#682) Update gauss_kl to work with K matrices of shape L x M x M | 26 March 2018, 13:21:04 UTC |
25116dc | Artem Artemev | 26 March 2018, 09:20:50 UTC | Merge pull request #688 from a5a/master Fixed ModuleNotFoundError | 26 March 2018, 09:20:50 UTC |
5fbff19 | asa | 22 March 2018, 17:17:56 UTC | fixed ModuleNotFoundError in natgrad_optimizer | 22 March 2018, 17:17:56 UTC |
ef45c39 | Artem Artemev | 20 March 2018, 12:37:23 UTC | Merge pull request #674 from GPflow/awav/natural-gradient-optimizer Natural Gradient Optimizer | 20 March 2018, 12:37:23 UTC |
aa3821b | Hugh Salimbeni | 16 March 2018, 14:59:38 UTC | Update doc strings for XiTransformation and add explanation to NatGrad tests. | 20 March 2018, 10:16:55 UTC |
9d8f3c1 | Artem Artemev | 15 March 2018, 23:19:55 UTC | Merge with updated branch. | 15 March 2018, 23:27:18 UTC |
0342cb9 | Artem Artemev | 15 March 2018, 23:18:25 UTC | SVGP vs SGPR optimization test fixed. | 15 March 2018, 23:18:25 UTC |
80528a3 | hrs13 | 14 March 2018, 13:25:41 UTC | added tests for xi transforms, and added nasty placeholder_with_default | 14 March 2018, 13:25:41 UTC |
6014011 | James Hensman | 14 March 2018, 11:48:31 UTC | Merge branch 'master' into awav/natural-gradient-optimizer | 14 March 2018, 11:48:31 UTC |
0bb77c3 | Artem Artemev | 11 March 2018, 23:15:40 UTC | Merge pull request #652 from GPflow/james/py27_docfix Py27 doc fix. | 11 March 2018, 23:15:40 UTC |
9c84c43 | Artem Artemev | 11 March 2018, 22:02:25 UTC | Merge branch 'master' into james/py27_docfix | 11 March 2018, 22:02:25 UTC |
c1be47a | Artem Artemev | 11 March 2018, 17:20:31 UTC | Change support message for python 3.5 | 11 March 2018, 17:20:31 UTC |
2a41df8 | Artem Artemev | 11 March 2018, 09:30:33 UTC | Merge branch 'master' into awav/natural-gradient-optimizer | 11 March 2018, 09:30:33 UTC |
236c4a6 | Artem Artemev | 10 March 2018, 23:18:59 UTC | Fixing bug in tf.group. Cleaning up documentation. | 10 March 2018, 23:18:59 UTC |
43ba8f8 | Artem Artemev | 09 March 2018, 22:12:58 UTC | Revert changes in "likelihood.py" | 09 March 2018, 22:12:58 UTC |
54dd63f | Artem Artemev | 09 March 2018, 22:10:44 UTC | Change python version title | 09 March 2018, 22:10:44 UTC |
2ab6c18 | Artem Artemev | 09 March 2018, 22:08:30 UTC | Merge pull request #653 from ialong/master remove conditional shape changes from multivariate_normal | 09 March 2018, 22:08:30 UTC |
4be4f07 | Hugh Salimbeni | 08 March 2018, 19:02:33 UTC | reverted to tuple | 08 March 2018, 19:02:33 UTC |
9335859 | Hugh Salimbeni | 08 March 2018, 18:59:59 UTC | group op has list rather than tuple | 08 March 2018, 18:59:59 UTC |
5f0c251 | Hugh Salimbeni | 08 March 2018, 18:35:01 UTC | Merge branch 'master' into awav/natural-gradient-optimizer | 08 March 2018, 18:35:01 UTC |
00674d4 | Hugh Salimbeni | 08 March 2018, 18:33:07 UTC | Merge branch 'awav/natural-gradient-optimizer' of https://github.com/GPflow/GPflow into awav/natural-gradient-optimizer | 08 March 2018, 18:33:07 UTC |
4edfd9d | Hugh Salimbeni | 08 March 2018, 18:32:54 UTC | added test with excluded vars | 08 March 2018, 18:32:54 UTC |
83f52d4 | Artem Artemev | 08 March 2018, 17:33:11 UTC | Modify notation with unicode symbols | 08 March 2018, 17:33:11 UTC |
a5b06ef | Hugh Salimbeni | 08 March 2018, 14:08:21 UTC | formatting | 08 March 2018, 14:08:21 UTC |
2e42560 | Hugh Salimbeni | 08 March 2018, 14:06:55 UTC | added more tests | 08 March 2018, 14:06:55 UTC |
653babe | Hugh Salimbeni | 08 March 2018, 12:12:55 UTC | added nat grads tests | 08 March 2018, 12:12:55 UTC |
08333e2 | Alessandro Davide Ialongo | 08 March 2018, 11:27:31 UTC | hit warning lines | 08 March 2018, 11:27:31 UTC |
dac1c73 | Artem Artemev | 07 March 2018, 18:45:34 UTC | Merge branch 'master' into master | 07 March 2018, 18:45:34 UTC |
4196ef5 | Artem Artemev | 07 March 2018, 18:44:02 UTC | Merge pull request #665 from GPflow/stj/autoflow_fix_docstr Minor improvement to decorators and AutoBuild | 07 March 2018, 18:44:02 UTC |
545cf74 | Alessandro Davide Ialongo | 07 March 2018, 16:30:00 UTC | Merge branch 'master' of github.com:GPflow/GPflow | 07 March 2018, 16:30:00 UTC |
24dd403 | Artem Artemev | 07 March 2018, 16:15:03 UTC | Merge branch 'master' into stj/autoflow_fix_docstr | 07 March 2018, 16:15:03 UTC |
6ebe0c6 | Alessandro Davide Ialongo | 07 March 2018, 16:05:03 UTC | update density tests | 07 March 2018, 16:05:03 UTC |
1fa2fb4 | Alessandro Davide Ialongo | 07 March 2018, 16:02:44 UTC | change copy paste error x has to be changed to mu on line 94 | 07 March 2018, 16:02:44 UTC |
ad97bf4 | Artem Artemev | 07 March 2018, 15:41:31 UTC | Clarify user messages. | 07 March 2018, 15:41:31 UTC |
ba69996 | Artem Artemev | 07 March 2018, 15:30:43 UTC | Copy original docstring always | 07 March 2018, 15:30:43 UTC |
d15e445 | ST John | 07 March 2018, 10:21:06 UTC | add ``` | 07 March 2018, 10:21:06 UTC |
80b82c5 | Artem Artemev | 06 March 2018, 21:46:25 UTC | Merge pull request #656 from GPflow/hugh/fix_triangular_transform fix consistency of triangular transform | 06 March 2018, 21:46:25 UTC |
9d04e3d | James Hensman | 06 March 2018, 18:15:36 UTC | docstrings in LowerTriangular transform, with help from Artem | 06 March 2018, 18:15:36 UTC |
3bf5314 | James Hensman | 06 March 2018, 17:59:21 UTC | Merge branch 'master' into hugh/fix_triangular_transform | 06 March 2018, 17:59:21 UTC |
7e8dc9f | st-- | 05 March 2018, 19:41:14 UTC | Adds rational-quadratic kernel and minor clean-up of notation (#666) * (square|euclid)_dist -> scaled_(square|euclid)_dist to make clear that it is already divided by lengthscale * add RationalQuadratic kernel * SquaredExponential * add test case * reoder * add DeprecationWarnings * improve docstrings * space * add no-cover pragmas for deprecated methods | 05 March 2018, 19:41:14 UTC |
1e0b45b | ST John | 04 March 2018, 14:34:59 UTC | fix typo in docstring | 04 March 2018, 14:34:59 UTC |
5ce105f | James Hensman | 02 March 2018, 16:10:31 UTC | improving dosctrings for LowerTriangular transform | 02 March 2018, 16:10:31 UTC |
91e6e65 | ST John | 02 March 2018, 10:03:15 UTC | tidy up decorators | 02 March 2018, 10:03:15 UTC |
785c537 | ST John | 02 March 2018, 10:03:00 UTC | keep original __init__'s docstring for Node subclasses | 02 March 2018, 10:03:00 UTC |
f9eeb64 | James Hensman | 28 February 2018, 11:46:58 UTC | Merge branch 'hugh/fix_triangular_transform' of github.com:GPflow/GPflow into hugh/fix_triangular_transform | 28 February 2018, 11:46:58 UTC |
4ed6aa5 | James Hensman | 28 February 2018, 11:43:03 UTC | even more triangular_transform tests | 28 February 2018, 11:43:03 UTC |
9e7cd3f | James Hensman | 28 February 2018, 10:00:54 UTC | Merge branch 'master' into hugh/fix_triangular_transform | 28 February 2018, 10:00:54 UTC |
47d119d | James Hensman | 28 February 2018, 09:59:45 UTC | more tests for lowerTriangular transofrms | 28 February 2018, 09:59:45 UTC |
8fac3c4 | vdutor | 27 February 2018, 17:02:09 UTC | Corrected the PCA implementation (#661) | 27 February 2018, 17:02:09 UTC |
5809cb0 | James Hensman | 26 February 2018, 17:08:53 UTC | updating triangular transforms (no longer flat) | 26 February 2018, 17:08:53 UTC |
fa79152 | Hugh Salimbeni | 23 February 2018, 13:01:45 UTC | started combination optimizer | 23 February 2018, 13:01:45 UTC |
c61a002 | Artem Artemev | 23 February 2018, 12:03:59 UTC | Small fixes in natgrads module. | 23 February 2018, 12:03:59 UTC |
49a8be4 | hrs13 | 22 February 2018, 19:10:34 UTC | added test and applied flattening | 22 February 2018, 19:10:34 UTC |
6c43de1 | Stefanos Eleftheriadis | 21 February 2018, 17:27:10 UTC | fixed squeezing bug in LowerTriangular transform (#654) | 21 February 2018, 17:27:10 UTC |
830858e | Alessandro Davide Ialongo | 21 February 2018, 12:19:10 UTC | remove conditional shape changes from multivariate_normal | 21 February 2018, 12:19:10 UTC |
bc2de16 | Mark van der Wilk | 19 February 2018, 12:03:05 UTC | Small typo | 19 February 2018, 12:03:05 UTC |
d0f5fe8 | James Hensman | 19 February 2018, 09:40:20 UTC | updating contributing page | 19 February 2018, 09:40:20 UTC |
cddb34b | James Hensman | 19 February 2018, 09:38:04 UTC | Merge branch 'master' of github.com:GPflow/GPflow | 19 February 2018, 09:38:04 UTC |
1ffbcd2 | Artem Artemev | 19 February 2018, 09:36:28 UTC | Add NatGradOptimizer. | 19 February 2018, 09:36:28 UTC |
e055218 | Ahsan Alvi | 18 February 2018, 11:03:32 UTC | fixed merge conflicts in the notebooks (#649) | 18 February 2018, 11:03:32 UTC |
0eaa40d | Artem Artemev | 13 February 2018, 22:11:51 UTC | Refactor index & naming rules. (#645) * shows short info about gpflow object. * Remove hidden names from core parentable class. * Intermediate result. * Add distinguishable pathname. * Refactor indices generation, parentable naming managment. * Transitioning to new indixes. * Rename full_name property on pathname. * Fixing tests. * Travis ignore user warnings. * Increase timeout notebook. * Tests for parentable cases. * Remove Node __repr__. * Renaming for build_name and build_pathname. Add deprication for full_name property. * Adding tests for depricated function. | 13 February 2018, 22:11:51 UTC |
a8f487a | Mark van der Wilk | 08 February 2018, 13:01:45 UTC | Some more Parameter inits respect default parameters. (#647) | 08 February 2018, 13:01:45 UTC |
d1ac7b8 | Alessandro Davide Ialongo | 07 February 2018, 13:36:57 UTC | Expectations speedup and refactoring: * new implementations of RBF and Linear kernel expectations as well as the RBF-Linear cross kernel expectation * more efficient mean function expectation handling * Streamline quadrature expectations and unified the expectations files * clearer distinction between quadrature_expectation and expectation which makes @quadrature_fallback superfluous * "Private" _expectation methods are kept private * Improve handling of Sum kernels (with 1 bug fixed on when cross expectations simplify) * switch to assert_allclose instead of the less advisable assert_almost_equal * switch around (feat, kern) to (kern, feat) in expectations for consistency * improve test coverage and reduced error tolerance * add, correct and improve docstrings * make covariance name consistent for all Gaussian probability_distributions: p.cov * add shape inference for guassian covariances | 07 February 2018, 14:00:17 UTC |