https://github.com/jiwoncpark/baobab

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Revision Author Date Message Commit Date
5a6134a Update demo notebooks to latest development, with axis ratio calculation enabled 09 November 2019, 00:04:13 UTC
ee7ca11 Remove manual install_requires 08 November 2019, 23:13:42 UTC
521c16d Pull from lenstronomy master since baobab is in dev mode 08 November 2019, 23:11:09 UTC
d962b04 Provide positional arg eval_at (bug) 08 November 2019, 21:31:03 UTC
303063a Remove custom lenstronomy path 08 November 2019, 21:19:47 UTC
5236782 Move SIS approx for Einstein radius into parameter_models 07 November 2019, 19:45:39 UTC
b043034 Abort Rung1BNNPrior, as I won't need it 07 November 2019, 19:45:18 UTC
75cc730 Pre-set list of params to realize and exclude in prep for enabling distributions whose parameters depend on other, already-realized parameters 07 November 2019, 16:31:41 UTC
96d8ae0 Update generate script to latest BaobabConfig change 07 November 2019, 16:30:01 UTC
f14401a Turn user-defined config as a dictionary for parser to ingest as a Dict object (not backward compatible) 07 November 2019, 16:29:18 UTC
b858c09 Reorg tests according to package structure 07 November 2019, 16:27:07 UTC
432c89b Enable two different redshift sampling, diff comoving volume vs independent normals 06 November 2019, 20:15:58 UTC
f735663 Separate out distributions in its own package in prep for a more generalized sampling 06 November 2019, 20:14:02 UTC
b9285d3 Add uniform PDF and switch to getattr from string comparison for assigning distributions 06 November 2019, 18:53:08 UTC
e304661 Update empirical configs to latest EmpiricalBNNPrior reorg 05 November 2019, 23:36:18 UTC
4375806 Create BaseCosmoBNNPrior class to separate out cosmology-aware sampling 05 November 2019, 23:35:26 UTC
970c8c9 Update docstring for existing BNNPriors 05 November 2019, 23:34:33 UTC
17eee71 Add script for extracting PSF maps from TDLMC data 01 November 2019, 02:15:18 UTC
1d9fad6 Remove hardcoded parent out_data directory 29 October 2019, 22:31:10 UTC
c67e3d1 Enable alternative import for Config object as before 29 October 2019, 22:26:49 UTC
6990248 Streamline import for the Config object, hiding module filenames 29 October 2019, 22:25:24 UTC
2507cdc Index image filenames from 0 (see Issue 24) 26 October 2019, 20:03:59 UTC
68879f7 Fix confusing interpretation of src_light_center_x, src_light_center_y in demo notebooks 11 October 2019, 21:08:41 UTC
f22ecdc Attribute my own paper in prep too 11 October 2019, 00:56:34 UTC
d7b3902 Configure setuptools for md to rest switch 10 October 2019, 23:06:31 UTC
3ba1354 Fix minor rst typos and formatting 10 October 2019, 23:05:32 UTC
cc39e96 Attribute lenstronomy with citation instructions 10 October 2019, 23:03:27 UTC
78314c1 Test generalized normal sampling 06 October 2019, 18:10:24 UTC
3e4c68b Ensure the notebooks run for both gamma and tdlmc 06 October 2019, 07:41:52 UTC
39380c5 Switch from amp to magnitude in viz demo notebooks (bug) 06 October 2019, 07:03:55 UTC
4f473df Increase default magnification cut from 2 to 4 for gamma config 06 October 2019, 06:56:34 UTC
2de3a37 Delete cosmo field of gamma diagonal config, as it's not used and thus misleading 06 October 2019, 06:53:26 UTC
d5858b2 Reject samples with e greater than 1 06 October 2019, 06:49:14 UTC
5748f08 Add fastell4py instructions to RTD (See Issue 19) 06 October 2019, 06:38:02 UTC
ba49a3d Add fastell4py installation instructions in README (See Issue 19) 06 October 2019, 06:36:48 UTC
c986e64 Add scatter due to fitting errors to FP model 02 October 2019, 21:59:12 UTC
a65fda2 Include all config files in import shortcut for package configs 02 October 2019, 21:21:22 UTC
a938df6 Implement AGN UV luminosity function, K-correction still implicit 02 October 2019, 21:20:21 UTC
b6aa7c2 Update data path so that out_dir does not include parent folder out_data 02 October 2019, 21:19:32 UTC
eb2b178 Add feedback section on RTD 02 October 2019, 18:26:49 UTC
9934148 Reorg docs for better filekeeping 02 October 2019, 18:11:21 UTC
965975c Edit path to make baobab importable 02 October 2019, 02:07:28 UTC
9d64a3b Import baobab for RTD 02 October 2019, 01:50:55 UTC
6131b93 Change parameter name from redshift to z for consistency 02 October 2019, 01:44:48 UTC
f1a8feb Improve Sphinx formatting 02 October 2019, 01:21:13 UTC
6a8e9a1 Update bnn_prior RTD page with new BNN prior classes 30 September 2019, 17:44:56 UTC
c9f2772 Add RTD page for to_hdf5.py script 30 September 2019, 17:44:35 UTC
4d1233a Do not hardcode image shape (bug) 30 September 2019, 17:32:06 UTC
5bb016b Add demo notebook for accessing resulting hdf5 file 30 September 2019, 09:31:24 UTC
cd9a21c Test to_hdf5.py script for breakage 30 September 2019, 09:31:04 UTC
21a8aa7 Implement script to convert .npy image files and metadata.csv into hdf5 file with useful metadata 30 September 2019, 09:30:30 UTC
900601d Ignore HDF5 file extensions 30 September 2019, 09:20:15 UTC
3138b1d Requires h5py and tables (not sure about this, as user may not need to run to_hdf5.py) 30 September 2019, 08:21:06 UTC
3936597 Define out_dir as the name of subdirectory inside out_data 30 September 2019, 07:36:44 UTC
ce90e1b Set entry point for to_hdf5.py 30 September 2019, 07:35:47 UTC
529c5aa Only save image filename in metadata, not containing folder 30 September 2019, 07:33:37 UTC
32745ec Add instructions to generate data before running the viz demo notebooks 30 September 2019, 03:35:59 UTC
9fa5200 Merge branch 'master' of https://github.com/jiwoncpark/baobab 30 September 2019, 02:40:38 UTC
d46308b Delete models.py, as it has been further divided into kinematics and parameters models 30 September 2019, 02:36:33 UTC
a5285bc Add template empirical config for gamma project 30 September 2019, 02:34:11 UTC
155fc03 Reorg models into a class structure, for which fit data sample (like SDSS) can be specified upon instantiation 30 September 2019, 02:32:17 UTC
a6a737c Add Rayleigh to list of available distributions for diagonal prior 30 September 2019, 02:31:09 UTC
85d4997 Merge branch 'issue/10' of https://github.com/jiwoncpark/baobab into issue/10 28 September 2019, 05:40:32 UTC
ba4e944 Convert into e1, e2 required by lenstronomy within sample function if config defines q, phi 28 September 2019, 05:40:16 UTC
bd890b2 Merge pull request #15 from jiwoncpark/issue/10 Issue/10 26 September 2019, 19:08:28 UTC
8ea937c Merge branch 'master' into issue/10 26 September 2019, 19:06:51 UTC
34535e0 Add docstring as per Simon's review comments 26 September 2019, 19:01:28 UTC
ff1e561 Start tracking new files, PR approval pending 25 September 2019, 22:13:12 UTC
eb78f1b Visualize samples from EmpiricalBNNPrior, R_sersic for lens and source light seem big 25 September 2019, 21:48:09 UTC
14e5e49 Fix log10 return value for src_light R_eff to linear scale (bug) 25 September 2019, 21:40:34 UTC
e916ba3 Change deprecated keyword psf_model to kernel_point_source in DataAPI constructor 25 September 2019, 21:27:58 UTC
0377da8 Add missing index to lenstronomy path printing (bug) 25 September 2019, 21:04:50 UTC
98127d0 Print lenstronomy version with text 25 September 2019, 21:01:02 UTC
17e7f48 Add Einstein radius selection to all config files 25 September 2019, 21:00:47 UTC
1edee53 Separate out absolute to apparent magnitude conversion for lens light (plus a related bug fix) 25 September 2019, 08:40:23 UTC
36ab108 Set default axis ratios to 0 to initiate sampling (bug) 25 September 2019, 06:37:05 UTC
70f9b94 Extract unitless value out of astropy function output 25 September 2019, 06:36:35 UTC
15a5650 Apply configurable Einstein radius cut 25 September 2019, 06:35:56 UTC
ed2cbcb Do not independently sample empirical parameters (bug) 24 September 2019, 22:40:43 UTC
634e209 Check in running version of EmpiricalBNNPrior, visualization pending 24 September 2019, 21:18:18 UTC
fcc7187 Change formatting 24 September 2019, 20:55:16 UTC
5a43dc4 Complete source parameter sampling for EmpiricalBNNPrior 24 September 2019, 20:54:07 UTC
fb55851 Automatically test all config files 22 September 2019, 05:36:39 UTC
da0af2d Check in sampler lens-related parameters in EmpiricalBNNPrior, version does not run 22 September 2019, 05:35:01 UTC
b309f54 Inherit error utility function to check for valid config entry 22 September 2019, 05:33:48 UTC
cad203d Remove positional arg in check validity 20 September 2019, 21:19:27 UTC
c77877e Set components class variable first 20 September 2019, 21:15:59 UTC
641a821 Fold in cov_info check for components list inside validity method 20 September 2019, 21:10:51 UTC
cd8d47e Allow sampling of parameters that don't land on the image 20 September 2019, 20:54:08 UTC
a4e6a21 Set up barebone structure for EmpiricalBNNPrior 17 September 2019, 01:19:32 UTC
8b09ae0 Clean up viz prior demo notebooks 17 September 2019, 01:18:39 UTC
79a9fe8 Add missing asterisks in multivar sample function call 13 September 2019, 13:26:09 UTC
093fc3d Catch errors in the test for generate.py 13 September 2019, 13:24:51 UTC
256855d Enforce overriding of sample method 13 September 2019, 12:50:12 UTC
fed7aa5 Test CovBNNPrior, breakage tests passing 13 September 2019, 12:49:48 UTC
4e09587 Implement CovBNNPrior 13 September 2019, 12:37:19 UTC
5f9f181 Remove baobab dependency specification 12 September 2019, 23:49:09 UTC
7c27510 Edit data path and add cornerplot cells 10 September 2019, 19:55:29 UTC
97a4121 Unset seed in noise_for_model that was resetting the global seed each time 10 September 2019, 19:16:05 UTC
1fd51ba Update README for optional n_data 10 September 2019, 19:15:36 UTC
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