| 6a85317 | qwangmsk | 14 May 2018, 16:26:27 UTC | Update README.md | 14 May 2018, 16:26:27 UTC |
| 0559a66 | qwangmsk | 14 May 2018, 16:00:24 UTC | Update README.md | 14 May 2018, 16:00:24 UTC |
| 1a20550 | qwangmsk | 14 May 2018, 15:59:04 UTC | Update README.md | 14 May 2018, 15:59:04 UTC |
| 1a884a9 | qwangmsk | 14 May 2018, 15:48:22 UTC | Update README.md | 14 May 2018, 15:48:22 UTC |
| 4fbffbb | qwangmsk | 08 May 2018, 15:10:31 UTC | Update README.md | 08 May 2018, 15:10:31 UTC |
| 79b8065 | qwangmsk | 20 February 2018, 02:01:05 UTC | Update README.md | 20 February 2018, 02:01:05 UTC |
| 112a08d | qwangmsk | 13 October 2017, 17:55:27 UTC | Delete tissue-conf2.txt | 13 October 2017, 17:55:27 UTC |
| 019d55e | qwangmsk | 13 October 2017, 16:02:44 UTC | Update tissue-conf.txt | 13 October 2017, 16:02:44 UTC |
| e17f920 | qwangmsk | 17 August 2017, 23:05:43 UTC | Update README.md | 17 August 2017, 23:05:43 UTC |
| 7b0e387 | qwangmsk | 05 August 2017, 18:10:33 UTC | Rename Description.md to README.md | 05 August 2017, 18:10:33 UTC |
| 609fc4e | qwangmsk | 05 August 2017, 18:09:11 UTC | Update Description.md | 05 August 2017, 18:09:11 UTC |
| 745a1a4 | qwangmsk | 04 August 2017, 15:56:24 UTC | Update README.md | 04 August 2017, 15:56:24 UTC |
| af2bf55 | qwangmsk | 24 July 2017, 14:27:37 UTC | Description of data added | 24 July 2017, 14:27:37 UTC |
| a1c00a1 | qwangmsk | 24 July 2017, 03:31:20 UTC | RSEM-calculated read counts of protein coding genes provided Please enter the commit message for your changes. Lines starting | 24 July 2017, 03:31:20 UTC |
| 47a1ff0 | qwangmsk | 26 May 2017, 03:30:47 UTC | Normalized data converted from log2 to wild type and unnormalized expression data added | 26 May 2017, 03:30:47 UTC |
| e1e9d0e | qwangmsk | 18 February 2017, 16:36:05 UTC | Update README.md | 18 February 2017, 16:36:05 UTC |
| 9206d15 | qwangmsk | 18 February 2017, 16:05:55 UTC | Update README.md | 18 February 2017, 16:05:55 UTC |
| b75042d | wangq | 14 July 2016, 16:59:35 UTC | Expression data from our pipeline uploaded | 14 July 2016, 17:01:05 UTC |
| 8054558 | qwangmsk | 14 July 2016, 15:15:41 UTC | Update README.md | 14 July 2016, 15:15:41 UTC |
| d234aa3 | qwangmsk | 14 July 2016, 15:00:47 UTC | Update README.md | 14 July 2016, 15:00:47 UTC |
| a781a8c | wangq | 07 July 2016, 19:18:38 UTC | Bugs related to data matrix creation fixed | 07 July 2016, 19:18:38 UTC |
| 04adf0b | qwangmsk | 05 July 2016, 14:45:17 UTC | Update README.md | 05 July 2016, 14:45:17 UTC |
| 6c6b491 | wangq | 05 July 2016, 14:31:54 UTC | Bugs causing failure to create data matrix fixed | 05 July 2016, 14:31:54 UTC |
| b02fe59 | wangq | 28 June 2016, 13:17:48 UTC | Code modified to consider different naming mechanism of FASTQ files | 28 June 2016, 13:17:51 UTC |
| 28ad495 | qwangmsk | 24 June 2016, 04:13:50 UTC | Update config-luna-mouse.txt | 24 June 2016, 04:13:50 UTC |
| 782e2cf | qwangmsk | 23 June 2016, 19:34:11 UTC | Update README.md | 23 June 2016, 19:34:11 UTC |
| d6ac071 | qwangmsk | 23 June 2016, 19:29:08 UTC | Update README.md | 23 June 2016, 19:29:08 UTC |
| ad371c5 | qwangmsk | 23 June 2016, 16:59:13 UTC | Update README.md | 23 June 2016, 16:59:13 UTC |
| a2066d0 | wangq | 23 June 2016, 16:50:45 UTC | Readme file updated | 23 June 2016, 16:50:45 UTC |
| 6dc78af | wangq | 22 June 2016, 20:33:12 UTC | Two sub-folders created to better organize the script files | 22 June 2016, 20:33:12 UTC |
| fe2d4f9 | wangq | 20 June 2016, 14:25:08 UTC | Code changed to allow output of normalized isoform expression | 20 June 2016, 14:25:08 UTC |
| 0d0aacb | wangq | 13 June 2016, 16:48:48 UTC | Splitting collect-qc.pl into two script files | 13 June 2016, 16:48:48 UTC |
| 4f3efb2 | wangq | 09 June 2016, 14:51:05 UTC | Allowing creating files to store error output of cluster jobs | 09 June 2016, 14:51:05 UTC |
| 7e1def1 | wangq | 08 June 2016, 16:52:46 UTC | A bug in pipeline.pl fixed | 08 June 2016, 16:52:46 UTC |
| f1f6c36 | wangq | 08 June 2016, 13:10:06 UTC | Addressing samples with multiple biological replicates | 08 June 2016, 13:10:06 UTC |
| 0538a1c | wangq | 06 June 2016, 18:13:03 UTC | Script pipeline-1-study.pl added to process RNA-seq samples other than TCGA and GTEx | 06 June 2016, 18:13:03 UTC |
| 197cea5 | wangq | 03 June 2016, 15:21:04 UTC | Missing code added to process-fastq.pl to make it complete | 03 June 2016, 15:21:04 UTC |
| 8dd234b | wangq | 02 June 2016, 17:15:29 UTC | Cleaning up configuration file | 02 June 2016, 17:15:29 UTC |
| 39e5293 | qwangmsk | 02 June 2016, 10:39:50 UTC | Update README.md | 02 June 2016, 10:39:50 UTC |
| 19e6654 | qwangmsk | 01 June 2016, 21:20:28 UTC | Update README.md | 01 June 2016, 21:20:28 UTC |
| 95f251b | qwangmsk | 01 June 2016, 21:17:31 UTC | Update README.md | 01 June 2016, 21:17:31 UTC |
| edab1d9 | qwangmsk | 01 June 2016, 18:29:19 UTC | Update README.md | 01 June 2016, 18:29:19 UTC |
| 266624b | qwangmsk | 01 June 2016, 18:28:26 UTC | Update README.md | 01 June 2016, 18:28:26 UTC |
| dca987b | qwangmsk | 01 June 2016, 18:27:24 UTC | Update README.md | 01 June 2016, 18:27:24 UTC |
| 10cf1bb | qwangmsk | 01 June 2016, 18:25:33 UTC | Update README.md | 01 June 2016, 18:25:33 UTC |
| dd157c1 | qwangmsk | 01 June 2016, 17:52:38 UTC | Update README.md | 01 June 2016, 17:52:38 UTC |
| 45a15c7 | wangq | 01 June 2016, 17:27:21 UTC | Splitting file tissue-conf.txt so that it contains only tissues with TCGA normal samples | 01 June 2016, 17:27:21 UTC |
| 07f2d46 | qwangmsk | 25 May 2016, 19:31:58 UTC | Update README.md | 25 May 2016, 19:31:58 UTC |
| 20d3c3d | wangq | 20 May 2016, 18:26:36 UTC | Allowing combining multiple tissues for batch effect correction | 20 May 2016, 18:26:36 UTC |
| 602e168 | wangq | 17 May 2016, 13:40:23 UTC | Changed the name of the file run-combat.pl to post-process.pl | 17 May 2016, 13:40:23 UTC |
| 09cfb01 | wangq | 13 May 2016, 17:26:28 UTC | Using a configuration file to allow adjusting batch effect correction | 13 May 2016, 17:26:28 UTC |
| a1e8be9 | wangq | 13 May 2016, 17:23:02 UTC | Removing dependency of download.pl on path | 13 May 2016, 17:23:02 UTC |
| cd6ce7c | wangq | 10 May 2016, 16:34:05 UTC | Multiple changes made and a bug in run-combat.pl fixed | 10 May 2016, 16:34:05 UTC |
| 443a108 | wangq | 20 April 2016, 13:40:09 UTC | README file updated | 20 April 2016, 13:40:09 UTC |
| a9d831c | wangq | 20 April 2016, 13:18:36 UTC | Enabling collect-qc.pl to create a matrix of FeatureCounts read counts | 20 April 2016, 13:20:41 UTC |
| 690a521 | qwangmsk | 28 March 2016, 14:37:24 UTC | Update README.md | 28 March 2016, 14:37:24 UTC |
| 1737ae9 | qwangmsk | 23 March 2016, 20:19:52 UTC | Update README.md | 23 March 2016, 20:19:52 UTC |
| 04b5119 | qwangmsk | 23 March 2016, 18:21:08 UTC | Create README.md | 23 March 2016, 18:21:08 UTC |
| 5a95551 | wangq | 22 March 2016, 14:38:22 UTC | Add configuration file used in luna | 22 March 2016, 14:38:22 UTC |
| 06003ed | wangq | 22 March 2016, 14:24:03 UTC | Initial creation of the project | 22 March 2016, 14:24:03 UTC |
