| bc69997 | jonbmartin | 31 May 2022, 23:45:20 UTC | fix additional deprecated aliases | 31 May 2022, 23:45:20 UTC |
| e9b2cf0 | jonbmartin | 31 May 2022, 23:39:26 UTC | update gaussian filter namespace | 31 May 2022, 23:39:26 UTC |
| 3dc4aca | jonbmartin | 31 May 2022, 23:01:40 UTC | remove deprecated type aliases for python 3.8 compatibility | 31 May 2022, 23:01:40 UTC |
| 1817ff8 | Siddharth Srinivasan | 23 January 2022, 00:58:22 UTC | Add DOI badge | 23 January 2022, 00:58:22 UTC |
| 85739ee | Siddharth Srinivasan | 17 December 2021, 00:08:02 UTC | Add datatype for MPI Bcast. | 17 December 2021, 00:17:06 UTC |
| 815e17d | Siddharth Srinivasan | 08 December 2021, 16:15:11 UTC | Move location of adding calibration in _poisson Unsure why, but if the calibration region is added at the end versus at the beginning, the _poisson function segmentation faults when decorated with numba.jit. Moving the calibration region to the beginning alleviates this. | 08 December 2021, 16:15:11 UTC |
| 278f9b3 | Siddharth Srinivasan | 18 November 2021, 00:23:39 UTC | add qa comment | 18 November 2021, 00:23:39 UTC |
| 61a049e | Siddharth Srinivasan | 17 November 2021, 23:35:42 UTC | Merge pull request #101 from ad12/fix-cupy-config try/except protection to warn for cudnn_enabled | 17 November 2021, 23:35:42 UTC |
| 0e60ac1 | Siddharth Srinivasan | 17 November 2021, 23:34:45 UTC | Remove comment | 17 November 2021, 23:34:45 UTC |
| 11565a1 | Arjun Desai | 08 November 2021, 00:17:49 UTC | try/except protection to warn for cudnn_enabled | 08 November 2021, 00:17:49 UTC |
| dde242d | Siddharth Srinivasan | 30 August 2021, 15:56:59 UTC | Merge pull request #96 from mikgroup/dev | 30 August 2021, 15:56:59 UTC |
| 9c4723d | Siddharth Srinivasan | 30 August 2021, 15:53:08 UTC | Merge pull request #95 from kmjohnson3/bugfixes Fix casting for complex GE RF | 30 August 2021, 15:53:08 UTC |
| d6199e9 | Kevin M. Johnson | 30 August 2021, 14:50:45 UTC | Fix casting for complex GE RF | 30 August 2021, 14:50:45 UTC |
| f64ae29 | Siddharth Srinivasan | 23 August 2021, 22:05:04 UTC | Merge pull request #93 from julioscanoa/dev Fix SENSE linop to work with coil_batch_size > 1 + Minor change to pip install for travis | 23 August 2021, 22:05:04 UTC |
| dad0276 | Julio Oscanoa | 23 August 2021, 21:30:00 UTC | Add upgrade option to pip install | 23 August 2021, 21:46:45 UTC |
| 23d9ef6 | Julio Oscanoa | 18 August 2021, 20:50:36 UTC | Fix SENSE linop to work with coil_batch_size > 1 Fix: When using coil_batch_size, SENSE linop stacked coil sensitivity maps interleavedly, which does not work properly for coil_batch_size > 1. Now, SENSE linop stacks them successively. Test: Modified function in test_app (test_shepp_logan_SenseRecon) and modified two in test_linop (test_sense_model_batch and test_noncart_sense_model_batch) for coil_batch_size >= 1. | 23 August 2021, 21:18:14 UTC |
| 2f633e0 | Siddharth Srinivasan | 19 August 2021, 01:22:21 UTC | Minor doc update for Toeplitz NUFFT | 19 August 2021, 01:22:21 UTC |
| 15343d6 | Siddharth Srinivasan | 18 August 2021, 23:19:11 UTC | Merge pull request #92 from mikgroup/dev Normal Operator API with Toeplitz NUFFT | 18 August 2021, 23:19:11 UTC |
| e84ca32 | Siddharth Srinivasan | 18 August 2021, 20:53:28 UTC | Toeplitz NUFFT option added to NUFFT linop - Added normal operators tests - Relaxed previous tests | 18 August 2021, 23:08:02 UTC |
| 15cff4c | Siddharth Srinivasan | 18 August 2021, 20:38:37 UTC | Remove sampling number from nufft documentation as it is not used. | 18 August 2021, 20:38:37 UTC |
| b819a54 | Siddharth Srinivasan | 18 August 2021, 20:35:58 UTC | Toeplitz PSF Calculates Toeplitz PSF for fast normal NUFFT calculation. | 18 August 2021, 20:35:58 UTC |
| 74d5ccc | Siddharth Srinivasan | 23 June 2021, 16:50:31 UTC | Normal Operator API Goal: - Enable use of normal operators for use in cases like the Toeplitz nuFFT where the normal operator can be efficiently calculated. Summary of changes: - Updated the linop class to allow for normal operators. - Modified app classes to utilize normal operator with a single evaluation of AHy. | 15 August 2021, 01:16:52 UTC |
| dd77e16 | Frank Ong | 01 July 2021, 23:57:16 UTC | Merge pull request #89 from mikgroup/remove-learn Remove learn module | 01 July 2021, 23:57:16 UTC |
| 00b75e5 | Frank Ong | 01 July 2021, 23:46:15 UTC | Remove learn module | 01 July 2021, 23:46:15 UTC |
| 62f3ecd | Frank Ong | 01 July 2021, 20:59:05 UTC | Merge pull request #88 from mikgroup/fix-convolve-1d Fix 1D convolve in CUDA | 01 July 2021, 20:59:05 UTC |
| 618c454 | Frank Ong | 01 July 2021, 20:20:47 UTC | Fix docstring indent | 01 July 2021, 20:20:47 UTC |
| 95a8def | Frank Ong | 01 July 2021, 19:52:10 UTC | Fix cudnn convolve for 1D functions and add errors for >3d For 1D convolve, do expand_dims to 2D | 01 July 2021, 19:52:10 UTC |
| 2de56af | Frank Ong | 01 July 2021, 18:52:35 UTC | Replace long with int64 to suppress numpy warning | 01 July 2021, 19:12:50 UTC |
| ca5f9db | Frank Ong | 17 June 2021, 01:13:29 UTC | Merge pull request #85 from cth7/patch-1 Correct default value for gfin in min_time_gradient | 17 June 2021, 01:13:29 UTC |
| 5a05fb9 | Chris Huynh | 17 June 2021, 00:42:29 UTC | Correct default value for gfin in min_time_gradient This makes the behaviour consistent with Michael Lustig's code | 17 June 2021, 00:42:29 UTC |
| 350ab6a | Frank Ong | 15 June 2021, 17:17:41 UTC | Add conda build config to explicitly specify Python versions | 15 June 2021, 17:17:41 UTC |
| 449dc7f | Frank Ong | 15 June 2021, 17:13:26 UTC | Set minimum python version to 3.6 | 15 June 2021, 17:13:26 UTC |
| c9159ca | Frank Ong | 15 June 2021, 16:45:22 UTC | Bump version: 0.1.22 → 0.1.23 | 15 June 2021, 16:45:22 UTC |
| 99e13e5 | Frank Ong | 09 May 2021, 00:01:01 UTC | Fix conda receipe | 15 June 2021, 16:43:53 UTC |
| 4f2e550 | Jonathan Martin | 19 May 2021, 00:34:29 UTC | Merge pull request #82 from nmickevicius/siemens-pulse-save new siemens_rf tool | 19 May 2021, 00:34:29 UTC |
| d003354 | jonbmartin | 19 May 2021, 00:26:19 UTC | remove venv folder | 19 May 2021, 00:26:19 UTC |
| 8b09617 | jonbmartin | 19 May 2021, 00:18:19 UTC | clean up formatting of siemens export | 19 May 2021, 00:18:19 UTC |
| 34850e2 | nmickevicius | 17 May 2021, 21:52:08 UTC | new siemens_rf tool | 17 May 2021, 21:52:08 UTC |
| b96e206 | Frank Ong | 08 May 2021, 23:58:41 UTC | Bump version: 0.1.21 → 0.1.22 | 08 May 2021, 23:58:41 UTC |
| da00def | Frank Ong | 22 September 2020, 23:07:37 UTC | Update conda numpy version to 1.12 or above | 08 May 2021, 23:58:35 UTC |
| 40cb8f5 | Jonathan Martin | 08 May 2021, 05:01:12 UTC | Merge pull request #80 from jonbmartin/spokes-to-sigpy pTx spokes designer & tweaks to trajgrad.py | 08 May 2021, 05:01:12 UTC |
| 3750b7a | jonbmartin | 08 May 2021, 04:55:57 UTC | correct stspk docstring | 08 May 2021, 04:55:57 UTC |
| eda0fbb | jonbmartin | 07 May 2021, 23:29:33 UTC | remove extra blank lines | 07 May 2021, 23:29:33 UTC |
| 7da518f | jonbmartin | 07 May 2021, 23:06:33 UTC | blank line to end of stspk | 07 May 2021, 23:06:33 UTC |
| 9c456b7 | jonbmartin | 07 May 2021, 22:09:56 UTC | update documentation | 07 May 2021, 22:50:33 UTC |
| 8bd71b7 | jonbmartin | 07 May 2021, 21:52:01 UTC | clarification to trapezoid descriptions | 07 May 2021, 22:50:23 UTC |
| 54121f0 | jonbmartin | 07 May 2021, 21:46:45 UTC | correct ramp on min_trap_grad | 07 May 2021, 22:50:13 UTC |
| bde37d6 | jonbmartin | 07 May 2021, 21:43:04 UTC | add amplitude check to trapgrad tests | 07 May 2021, 22:50:04 UTC |
| e743567 | jonbmartin | 07 May 2021, 21:38:13 UTC | add trapezoid designer tests | 07 May 2021, 22:49:54 UTC |
| b1b1ffb | jonbmartin | 07 May 2021, 21:23:08 UTC | remove fov field from explicit linop | 07 May 2021, 22:49:43 UTC |
| aae8f72 | jonbmartin | 07 May 2021, 21:22:54 UTC | clean up test code | 07 May 2021, 22:49:28 UTC |
| f4f1deb | jonbmartin | 24 March 2021, 17:59:51 UTC | correction to ramps on trap_grad() and min_trap_grad() | 07 May 2021, 22:49:21 UTC |
| 58e1c33 | jonbmartin | 06 May 2021, 21:25:32 UTC | add spokes gradient designer | 07 May 2021, 22:49:12 UTC |
| 8b40d0e | jonbmartin | 06 May 2021, 21:25:57 UTC | test for stspk spokes designer | 07 May 2021, 22:49:02 UTC |
| 2ca4ddc | jonbmartin | 06 May 2021, 22:11:40 UTC | add spokes designer to doc | 07 May 2021, 22:48:55 UTC |
| e8d5815 | jonbmartin | 06 May 2021, 21:25:01 UTC | spokes designer | 07 May 2021, 22:48:45 UTC |
| f815e1c | Frank Ong | 03 May 2021, 18:27:54 UTC | Merge pull request #78 from ad12/master | 03 May 2021, 18:27:54 UTC |
| 11ac71c | Arjun Desai | 03 May 2021, 18:13:51 UTC | update config.py to treat cupy as an optional dependency | 03 May 2021, 18:13:51 UTC |
| 6373e21 | Frank Ong | 27 April 2021, 16:37:33 UTC | Merge pull request #76 from sidward/main Fixes to BlocksToArray and ArrayToBlocks | 27 April 2021, 16:37:33 UTC |
| 920197c | Siddharth Srinivasan | 27 April 2021, 16:32:12 UTC | Dimensions fix to blocks linop | 27 April 2021, 16:32:12 UTC |
| bf8dea6 | Siddharth Srinivasan | 27 April 2021, 15:56:11 UTC | Cast to list to allow for concat | 27 April 2021, 15:56:11 UTC |
| 5468aee | Frank Ong | 26 April 2021, 23:57:22 UTC | Merge pull request #75 from kmjohnson3/master Add min time gradient code for arbitrary trajectories. | 26 April 2021, 23:57:22 UTC |
| a1da1a6 | Kevin M. Johnson | 26 April 2021, 22:58:53 UTC | Remove plot from gradient calc | 26 April 2021, 22:58:53 UTC |
| 47093ff | Kevin M. Johnson | 26 April 2021, 22:46:25 UTC | Code convention for pytorch | 26 April 2021, 22:47:36 UTC |
| 19bc39e | Kevin M. Johnson | 26 April 2021, 22:36:49 UTC | Added back zero copy test for pytorch | 26 April 2021, 22:36:49 UTC |
| ce089c0 | Kevin M. Johnson | 26 April 2021, 22:26:38 UTC | Cleanup some formatting errors | 26 April 2021, 22:26:38 UTC |
| e6f6825 | Kevin M. Johnson | 26 April 2021, 22:16:01 UTC | Added tests for arc length gradient design | 26 April 2021, 22:16:01 UTC |
| b5b904f | Kevin M. Johnson | 26 April 2021, 16:52:40 UTC | Add arc length gradient design. Changed torch testing, and changed import to avoid cudnn conflict | 26 April 2021, 16:55:37 UTC |
| 3b6c565 | Kevin M. Johnson | 22 April 2021, 21:30:28 UTC | Merge pull request #3 from mikgroup/master Merge sigpy core | 22 April 2021, 21:30:28 UTC |
| f076879 | Frank Ong | 22 April 2021, 06:35:46 UTC | Merge pull request #74 from sidward/main Add tol option to other algs in LinearLeastSquares | 22 April 2021, 06:35:46 UTC |
| a637ce0 | Siddharth Srinivasan | 16 April 2021, 16:11:08 UTC | Add tol option to other algs in LinearLeastSquares | 16 April 2021, 16:11:08 UTC |
| 4a5e0f6 | Frank Ong | 12 April 2021, 15:38:08 UTC | Merge pull request #72 from sidward/master | 12 April 2021, 15:38:08 UTC |
| 02d5a44 | Siddharth Srinivasan | 09 April 2021, 20:32:08 UTC | Minor changes to Linear Least Squares * Add ``tol`` option to constructor that is used when using the "GradientMethod" solver. * Move residual to CPU (otherwise it errors when using "GradientMethod".) | 12 April 2021, 13:05:26 UTC |
| e7f1ba2 | Frank Ong | 04 February 2021, 04:20:20 UTC | Merge pull request #70 from sickkids-mri/est_shp | 04 February 2021, 04:20:20 UTC |
| 3203d55 | Chris Huynh | 02 February 2021, 20:19:58 UTC | Add option to specify grd_shape | 02 February 2021, 20:30:34 UTC |
| fa1acc0 | Chris Huynh | 20 January 2021, 18:13:09 UTC | Add option to specify img_shape | 21 January 2021, 02:58:59 UTC |
| 8c25c53 | Frank Ong | 27 October 2020, 01:01:30 UTC | Merge pull request #66 from sickkids-mri/memleak Fix memory leak caused by alg referencing app object | 27 October 2020, 01:01:30 UTC |
| 11dc18f | Chris Huynh | 27 October 2020, 00:03:00 UTC | Fix memory leak caused by alg referencing app object | 27 October 2020, 00:03:00 UTC |
| ac449e7 | Frank Ong | 23 October 2020, 23:40:29 UTC | Create python-publish.yml | 23 October 2020, 23:40:29 UTC |
| 6e15434 | Jonathan Martin | 16 October 2020, 04:40:49 UTC | Merge pull request #64 from jonbmartin/tseg-bug-fix SENSE time-segmented off-resonance correction bug fix | 16 October 2020, 04:40:49 UTC |
| aa117d8 | jonbmartin | 15 October 2020, 18:51:37 UTC | remove mask lines- unnecessary | 15 October 2020, 18:51:37 UTC |
| 2fca305 | jonbmartin | 15 October 2020, 18:46:19 UTC | add test of SENSE model with simple 1 seg time segmented off resonance correction | 15 October 2020, 18:46:19 UTC |
| a83c96c | jonbmartin | 15 October 2020, 17:27:17 UTC | fix bug in tseg_off_res_b_ct by casting number of points in time vector to int. | 15 October 2020, 17:45:07 UTC |
| a125b77 | Frank Ong | 22 September 2020, 23:22:11 UTC | Merge branch 'master' of https://github.com/mikgroup/sigpy | 22 September 2020, 23:22:11 UTC |
| cd27418 | Frank Ong | 22 September 2020, 23:21:47 UTC | Add exception if accel is less than 1 for poisson | 22 September 2020, 23:21:47 UTC |
| fe386f9 | Frank Ong | 22 September 2020, 23:02:38 UTC | Bump version: 0.1.20 → 0.1.21 | 22 September 2020, 23:02:38 UTC |
| fd9a970 | Frank Ong | 22 September 2020, 22:44:59 UTC | Remove bloch tests | 22 September 2020, 22:44:59 UTC |
| 2c6fd63 | Frank Ong | 22 September 2020, 22:44:28 UTC | Fix poisson disk documentation typo | 22 September 2020, 22:44:28 UTC |
| d496c01 | Frank Ong | 22 September 2020, 22:42:33 UTC | Remove bloch functions from mri module mri.rf contains bloch simulation functions already | 22 September 2020, 22:43:46 UTC |
| 08bef3c | Frank Ong | 22 September 2020, 22:22:16 UTC | Fix poisson disc sampling mask generation Before fixing, the function segfaults or stalls for some rectangular shapes. The main reason is that poisson disc mask requires a radius parameter such that each sample is away from each other. The problem was for rectangular shapes, the radius parameter is adjusted such that it was not stable. | 22 September 2020, 22:33:42 UTC |
| a05b481 | Frank Ong | 07 September 2020, 19:42:22 UTC | Support 3D in ESPIRiT Use batch 3D array_to_block instead of 4D array_to_block in ESPIRiT to support 3D ESPIRiT. | 07 September 2020, 19:42:22 UTC |
| cb57c8f | Frank Ong | 21 August 2020, 21:28:42 UTC | Fix import | 21 August 2020, 21:28:42 UTC |
| 28034d3 | Frank Ong | 21 August 2020, 21:26:02 UTC | Add documentation for new prox/thresh functions | 21 August 2020, 21:26:02 UTC |
| 2f644ee | Frank Ong | 21 August 2020, 21:25:42 UTC | Add psd projection prox operator | 21 August 2020, 21:25:42 UTC |
| d9e7efd | Frank Ong | 21 August 2020, 21:15:34 UTC | Add projection function to PSD matrices | 21 August 2020, 21:15:34 UTC |
| 0000c62 | Frank Ong | 21 August 2020, 21:12:32 UTC | Add LInf prox operator | 21 August 2020, 21:12:32 UTC |
| 0ddc624 | Frank Ong | 21 August 2020, 21:09:50 UTC | Add l infinity threshold | 21 August 2020, 21:09:50 UTC |
| c3594cb | Frank Ong | 21 August 2020, 21:03:28 UTC | Fix vmin/vmax in plot | 21 August 2020, 21:03:28 UTC |
| 6c8f40b | Frank Ong | 21 August 2020, 21:03:01 UTC | Move coord to device in NUFFT linops | 21 August 2020, 21:03:01 UTC |
| 67099ea | Frank Ong | 21 August 2020, 18:09:29 UTC | Bump version: 0.1.19 → 0.1.20 | 21 August 2020, 18:09:29 UTC |
