| 5ce6079 | Vladislav Kamenev | 24 December 2017, 09:05:07 UTC | New K-Means screenshots | 24 December 2017, 09:05:07 UTC |
| 8c52fe9 | Vladislav Kamenev | 20 December 2017, 05:16:58 UTC | New tutorial | 24 December 2017, 08:24:39 UTC |
| fd008ce | Alexey Sergushichev | 23 December 2017, 12:36:24 UTC | k-means returns a vector of correct length | 23 December 2017, 12:36:24 UTC |
| 5ce7a77 | Alexey Sergushichev | 23 December 2017, 10:59:47 UTC | remove name conflict for httr::content | 23 December 2017, 10:59:47 UTC |
| f4290d9 | Alexey Sergushichev | 21 December 2017, 19:40:48 UTC | Using upstream GEOquery | 21 December 2017, 19:40:48 UTC |
| 4d8281b | Alexey Sergushichev | 21 December 2017, 18:23:54 UTC | getGSE refactored | 21 December 2017, 18:23:54 UTC |
| 8a92646 | Alexey Sergushichev | 20 December 2017, 10:58:50 UTC | Updated js | 20 December 2017, 10:58:50 UTC |
| 0e32682 | Alexey Sergushichev | 13 December 2017, 10:31:13 UTC | Merged PCA label zoom fix | 13 December 2017, 10:31:13 UTC |
| 277aab2 | Alexey Sergushichev | 01 December 2017, 13:54:46 UTC | Partial import from httr | 01 December 2017, 13:58:11 UTC |
| 6252abd | Alexey Sergushichev | 01 December 2017, 13:00:31 UTC | Updated JS code | 01 December 2017, 13:00:31 UTC |
| 7106ddb | Alexey Sergushichev | 01 December 2017, 12:56:06 UTC | Merge branch 'vlakam-shinygam' | 01 December 2017, 12:56:06 UTC |
| fdd67bf | Alexey Sergushichev | 01 December 2017, 12:55:50 UTC | Better DE table handling for Shiny GAM | 01 December 2017, 12:55:50 UTC |
| 1d98e9c | Vladislav Kamenev | 01 December 2017, 03:22:50 UTC | Shiny GAM Analysis function | 01 December 2017, 03:22:50 UTC |
| 5638f06 | Alexey Sergushichev | 30 November 2017, 19:58:45 UTC | Merge branch 'master' of github.com:ctlab/phantasus | 30 November 2017, 19:58:45 UTC |
| 0c904c5 | Alexey Sergushichev | 30 November 2017, 19:58:02 UTC | fix for #68 | 30 November 2017, 19:58:02 UTC |
| c43ba6b | Alexey Sergushichev | 30 November 2017, 18:41:23 UTC | Merge pull request #71 from vlakam/vlakam-readme Small readme fixes | 30 November 2017, 18:41:23 UTC |
| ac8cf6c | Vladislav Kamenev | 30 November 2017, 04:09:59 UTC | Update README.md ERROR: dependency ‘XML’ is not available for package ‘GEOquery’ CRAN репозиторий для devtools | 30 November 2017, 04:09:59 UTC |
| 54dc865 | Alexey Sergushichev | 23 November 2017, 14:12:36 UTC | Auto PCA + d3labeler | 23 November 2017, 14:12:36 UTC |
| e73634c | Alexey Sergushichev | 21 November 2017, 09:05:51 UTC | temp fix for #68 | 21 November 2017, 09:05:51 UTC |
| eb4aa6f | Alexey Sergushichev | 21 November 2017, 08:37:10 UTC | test and fix for #36 related issue | 21 November 2017, 08:37:10 UTC |
| b305f21 | Alexey Sergushichev | 20 November 2017, 22:31:50 UTC | test and fix for #70 | 20 November 2017, 22:31:50 UTC |
| dc89bf0 | Alexey Sergushichev | 20 November 2017, 21:44:47 UTC | test and fix for loadGEO working with multi-platform GSEs | 20 November 2017, 21:44:47 UTC |
| 827f546 | Alexey Sergushichev | 20 November 2017, 21:24:29 UTC | limma code simplified | 20 November 2017, 21:24:29 UTC |
| 33e4392 | Alexey Sergushichev | 20 November 2017, 20:57:18 UTC | test and fix for limma working with a signle phenotype attribute | 20 November 2017, 20:57:18 UTC |
| 7682b61 | baba-beda | 17 October 2017, 15:08:52 UTC | V0.99.23 | 17 October 2017, 15:08:52 UTC |
| b19c321 | baba-beda | 17 October 2017, 15:06:53 UTC | collapse options for selecting maximum mean/median probe #69 | 17 October 2017, 15:06:53 UTC |
| 11d05e5 | baba-beda | 15 October 2017, 11:59:09 UTC | V0.99.22 | 15 October 2017, 11:59:09 UTC |
| daafab9 | baba-beda | 15 October 2017, 11:57:51 UTC | shortened some lines | 15 October 2017, 11:57:51 UTC |
| bd224be | baba-beda | 15 October 2017, 11:44:27 UTC | clarifying the function | 15 October 2017, 11:44:27 UTC |
| 6e6a45e | baba-beda | 15 October 2017, 11:39:09 UTC | updated vignette + removed ocpu output from servePhantasus + updated static files | 15 October 2017, 11:39:09 UTC |
| 5f45c6c | baba-beda | 14 October 2017, 19:08:21 UTC | fixed NEWS + V0.99.21 | 14 October 2017, 19:08:21 UTC |
| 265f5ba | baba-beda | 14 October 2017, 19:03:59 UTC | removed currently ignored js test files | 14 October 2017, 19:03:59 UTC |
| 860535b | baba-beda | 14 October 2017, 18:56:38 UTC | using merge version of js | 14 October 2017, 18:56:38 UTC |
| 8db03e1 | Alexey Sergushichev | 13 October 2017, 13:31:42 UTC | typo in example | 13 October 2017, 13:31:42 UTC |
| d5d7ba6 | Alexey Sergushichev | 13 October 2017, 12:40:11 UTC | file paths in servePhantasus options are normalized automatically | 13 October 2017, 12:40:11 UTC |
| 7061873 | Alexey Sergushichev | 13 October 2017, 12:33:01 UTC | reparseCachedESs | 13 October 2017, 12:33:01 UTC |
| 605564b | Daria | 12 October 2017, 14:04:25 UTC | Update .gitmodules | 12 October 2017, 14:04:25 UTC |
| 8b296ee | baba-beda | 12 October 2017, 13:53:44 UTC | trying to fix module problem | 12 October 2017, 13:53:44 UTC |
| 04a7cd1 | baba-beda | 12 October 2017, 13:14:59 UTC | changed gitmodules | 12 October 2017, 13:14:59 UTC |
| 7935004 | baba-beda | 09 October 2017, 13:08:33 UTC | V0.99.20 better code coverage | 09 October 2017, 13:08:33 UTC |
| 97c55f6 | baba-beda | 09 October 2017, 11:48:48 UTC | true V0.99.19 (forgot static again) | 09 October 2017, 11:48:48 UTC |
| ee35a45 | baba-beda | 09 October 2017, 11:40:41 UTC | V0.99.19 | 09 October 2017, 11:40:41 UTC |
| 226a4d3 | baba-beda | 09 October 2017, 10:11:54 UTC | push to check hypothesis | 09 October 2017, 10:11:54 UTC |
| f26c998 | baba-beda | 05 October 2017, 13:45:25 UTC | a bit safer code | 05 October 2017, 13:45:25 UTC |
| 0b68529 | baba-beda | 05 October 2017, 10:53:23 UTC | parsing phenoData correctly #64 | 05 October 2017, 10:53:23 UTC |
| bff2115 | baba-beda | 04 October 2017, 11:24:43 UTC | forgot to change static | 04 October 2017, 11:24:43 UTC |
| 329c030 | baba-beda | 04 October 2017, 11:23:01 UTC | fix for #67 | 04 October 2017, 11:23:01 UTC |
| bc36a15 | baba-beda | 04 October 2017, 10:52:21 UTC | fix for #68 | 04 October 2017, 10:52:21 UTC |
| afd1a5f | baba-beda | 29 September 2017, 13:56:03 UTC | updated tutorial | 29 September 2017, 13:56:03 UTC |
| f8e91e9 | Daria | 29 September 2017, 13:06:30 UTC | Merge pull request #66 from ctlab/develop error messages | 29 September 2017, 13:06:30 UTC |
| 88c7c14 | baba-beda | 29 September 2017, 12:42:48 UTC | #65 added error messages | 29 September 2017, 12:42:48 UTC |
| 93700d1 | baba-beda | 26 September 2017, 16:07:44 UTC | error is thrown when dataset is not found | 26 September 2017, 16:07:44 UTC |
| c85710f | Daria | 20 September 2017, 16:07:01 UTC | Merge pull request #63 from ctlab/develop Fixed some problems with hpages comments and added several features | 20 September 2017, 16:07:01 UTC |
| 49e04e7 | baba-beda | 20 September 2017, 15:35:09 UTC | added changes description to news and version bump | 20 September 2017, 15:35:09 UTC |
| e7fafb7 | baba-beda | 20 September 2017, 15:29:32 UTC | checkout to master before merge | 20 September 2017, 15:29:32 UTC |
| 85c51c7 | baba-beda | 19 September 2017, 15:18:45 UTC | merge | 19 September 2017, 15:18:45 UTC |
| c8dac28 | baba-beda | 19 September 2017, 15:18:22 UTC | updated NAMESPACE, biocViews, servePhantasus (opening browser automatically), phantasus-tutorial | 19 September 2017, 15:18:22 UTC |
| ccc01f2 | Daria | 18 September 2017, 17:27:47 UTC | Update Dockerfile | 18 September 2017, 17:27:47 UTC |
| 96985ef | baba-beda | 18 September 2017, 16:02:47 UTC | for correct check: | 18 September 2017, 16:02:47 UTC |
| aa21ba4 | baba-beda | 18 September 2017, 15:39:37 UTC | again I forgot to update static files | 18 September 2017, 15:39:37 UTC |
| 18a7914 | baba-beda | 18 September 2017, 15:36:32 UTC | temporarily removed changes from serve to fix minor bugs | 18 September 2017, 15:36:32 UTC |
| 1979587 | baba-beda | 18 September 2017, 13:56:39 UTC | tutorial changes | 18 September 2017, 13:56:39 UTC |
| 40fb0fd | baba-beda | 18 September 2017, 13:56:07 UTC | merge | 18 September 2017, 13:56:07 UTC |
| d5a263d | baba-beda | 18 September 2017, 13:54:56 UTC | added more options to servePhantasus and specified default values for them | 18 September 2017, 13:54:56 UTC |
| bcee445 | Alexey Sergushichev | 16 September 2017, 09:34:02 UTC | fixed loading rna-seq GSEs when not all samples are quantified | 16 September 2017, 09:34:02 UTC |
| 143dac1 | Alexey Sergushichev | 15 September 2017, 21:30:08 UTC | Experimental support for loading RNA-seq dataset from GEO via ARCHS4 | 15 September 2017, 21:30:08 UTC |
| 7a56b97 | baba-beda | 14 September 2017, 15:39:06 UTC | loading dataset from preloaded directory runs as expected (I suppose) | 14 September 2017, 15:39:06 UTC |
| 181172b | baba-beda | 14 September 2017, 15:32:34 UTC | minor beautifying fix | 14 September 2017, 15:32:34 UTC |
| d7f377d | baba-beda | 14 September 2017, 15:28:05 UTC | forgot to load updates | 14 September 2017, 15:28:05 UTC |
| 6e65e90 | baba-beda | 14 September 2017, 15:25:36 UTC | added loading saved datasets from open-menu | 14 September 2017, 15:25:36 UTC |
| c52ffb3 | baba-beda | 14 September 2017, 14:50:37 UTC | fix for latest failed build | 14 September 2017, 14:50:37 UTC |
| b1115e0 | baba-beda | 14 September 2017, 14:23:14 UTC | testes checkPreloaded and fixed some bugs | 14 September 2017, 14:23:14 UTC |
| f7f124d | baba-beda | 13 September 2017, 23:14:57 UTC | update static must be run from working dir; added additional volume to dockerfiles for preloaded | 13 September 2017, 23:14:57 UTC |
| c35882e | baba-beda | 13 September 2017, 23:03:21 UTC | added tests for loadPreloaded; but bioccheck failing, no examples now | 13 September 2017, 23:06:27 UTC |
| 083c6d1 | baba-beda | 13 September 2017, 18:50:28 UTC | added functionality of loading datasets by name from some directory on server | 13 September 2017, 18:50:28 UTC |
| 947dcb1 | baba-beda | 13 September 2017, 18:49:59 UTC | R | 13 September 2017, 18:49:59 UTC |
| de96c12 | baba-beda | 13 September 2017, 16:37:04 UTC | added tutorial as html to static files | 13 September 2017, 16:37:04 UTC |
| 3d1ba87 | baba-beda | 13 September 2017, 16:18:43 UTC | fixed help-menu links and script for updating static files | 13 September 2017, 16:18:43 UTC |
| ba3d535 | baba-beda | 13 September 2017, 15:13:45 UTC | shame on me; develop folder wasn't added | 13 September 2017, 15:13:45 UTC |
| e2630e5 | baba-beda | 13 September 2017, 14:56:53 UTC | renamed develop dockerfile | 13 September 2017, 14:56:53 UTC |
| 1c9939d | baba-beda | 13 September 2017, 14:55:48 UTC | trying to separate two dockerfiles, so develop docker image is built from the corresponding context | 13 September 2017, 14:55:48 UTC |
| b94fcf7 | baba-beda | 13 September 2017, 00:55:28 UTC | trying to build develop docker from travis | 13 September 2017, 00:55:28 UTC |
| 6aa8209 | baba-beda | 13 September 2017, 00:50:16 UTC | added line about links with parameters to tutorial | 13 September 2017, 00:50:16 UTC |
| af70c19 | Daria | 13 September 2017, 00:45:37 UTC | Merge pull request #60 from ctlab/master Before going further in developing | 13 September 2017, 00:45:37 UTC |
| a0df020 | baba-beda | 12 September 2017, 13:51:30 UTC | added possibility to load GEO-dataset by specifying its id in link parameters #51 | 12 September 2017, 13:51:30 UTC |
| 88f6b62 | baba-beda | 11 September 2017, 11:54:02 UTC | version + restructure | 11 September 2017, 11:54:02 UTC |
| 364c842 | baba-beda | 11 September 2017, 11:39:38 UTC | fixed kmeans issue #54 | 11 September 2017, 11:39:38 UTC |
| e408ded | baba-beda | 08 September 2017, 14:04:50 UTC | let's check it out | 08 September 2017, 14:04:50 UTC |
| 52d081a | baba-beda | 08 September 2017, 13:56:37 UTC | updated phantasus.js | 08 September 2017, 13:56:37 UTC |
| 36fff93 | baba-beda | 05 September 2017, 16:27:15 UTC | forgot to update static files inside package | 05 September 2017, 16:27:15 UTC |
| 8c79cc4 | baba-beda | 05 September 2017, 15:53:36 UTC | update messages | 05 September 2017, 15:53:36 UTC |
| 291338d | baba-beda | 05 September 2017, 13:36:56 UTC | loading existing files if there is no connection | 05 September 2017, 13:36:56 UTC |
| 0515747 | baba-beda | 05 September 2017, 11:14:19 UTC | better downloading strategy | 05 September 2017, 11:14:19 UTC |
| c23da33 | Alexey Sergushichev | 05 September 2017, 09:46:05 UTC | Update .gitmodules removed old submodule | 05 September 2017, 09:46:05 UTC |
| 3fa5990 | baba-beda | 04 September 2017, 15:45:24 UTC | let's just expect warnings in tests of unreal datasets | 04 September 2017, 15:45:24 UTC |
| c247b65 | baba-beda | 04 September 2017, 15:39:24 UTC | fixed a bit downloading part | 04 September 2017, 15:39:24 UTC |
| d870b9f | baba-beda | 04 September 2017, 15:21:31 UTC | downloading gds files manually | 04 September 2017, 15:21:31 UTC |
| 0a150cd | baba-beda | 04 September 2017, 14:59:36 UTC | updated getES documentation with mirrorPath | 04 September 2017, 14:59:36 UTC |
| 0af69fe | baba-beda | 04 September 2017, 14:42:03 UTC | version | 04 September 2017, 14:42:03 UTC |
| 1c93db9 | baba-beda | 04 September 2017, 14:02:53 UTC | moved js files explicitly | 04 September 2017, 14:02:53 UTC |
