https://github.com/GPflow/GPflow

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23959d3 Merge branch 'st/new_svgp-redesign' into st/posterior_with_linear_operators 15 April 2021, 16:58 UTC
591d90a Merge branch 'develop' into st/new_svgp-redesign 15 April 2021, 16:58 UTC
8abdc92 update VFF notebook 15 April 2021, 16:45 UTC
1675221 better fallback 15 April 2021, 16:45 UTC
66429d8 remove freeze method 15 April 2021, 16:42 UTC
9f50087 Bump version to 2.1.5 (#1666) * Bump version to 2.1.5 * add release notes section for 2.2.0. 15 April 2021, 15:40 UTC
46b8f33 rename q_dist and associated classes to private 15 April 2021, 09:24 UTC
cc1d9d9 Revert "Experiment: use the caching rather than fused predict_f in SVGP" This reverts commit a9d889beeb63701793a978e45f5a2b2cbeed7a03. 15 April 2021, 09:18 UTC
514ad70 John/start posterior tests (#1659) * Add unit tests * Split the Kuf function over separate and shared inducing points. * Add error messages. * Add parameters for input dimension, number of latent GPs and output dimension. * Add test for white=False * Add test with whiten * Use assert_allclose * Add posterior to tested posteriors set. * Ensure there is an L axis * Add decorator * Add qsqrt shape fixture 15 April 2021, 09:15 UTC
ec25ca6 add WIP LinearOperatorBasePosterior 14 April 2021, 09:36 UTC
1172949 remove WIP LinearOperatorBasePosterior 14 April 2021, 09:35 UTC
e7851ca Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp-redesign 14 April 2021, 09:33 UTC
1d96af4 fix gpflow.config module-level docstring (#1664) 13 April 2021, 16:01 UTC
3884e79 Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp-redesign 13 April 2021, 14:23 UTC
bfb60c0 John/iic whiten (#1663) * Add test with whiten * Make format * Update RELEASE.md Co-authored-by: st-- <st--@users.noreply.github.com> 13 April 2021, 14:22 UTC
0812cd3 John/fc whiten (#1662) * Add test for white=False * Make format * Update RELEASE.md 13 April 2021, 13:46 UTC
ea39cba Add RELEASE.md (#1661) * Add RELEASE.md inspired by TensorFlow and include in PR template * add HOWTO_RELEASE.md 12 April 2021, 15:35 UTC
4e6f9ce Clean up utilities subpackage (#1650) Separates gpflow.utilities.utilities into gpflow.utilities.misc and gpflow.utilities.traversal. Though user code ought to access all functions directly through gpflow.utilities, not its submodules, a backwards-compatible redirect is provided. Also moves tests around to improve module structure. 08 April 2021, 12:46 UTC
afb7699 bring back full list of all contributors throughout time (#1660) * bring back full list of all contributors throughout time * updated PR template * links to github accounts 06 April 2021, 10:44 UTC
a8e182d Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp-redesign 06 April 2021, 10:21 UTC
21e5317 Proposed fix for the fully_correlated_conditional_repeat issue (#1652) Fixes #1651 06 April 2021, 10:15 UTC
5b76536 Fix fallback inducing points with multioutput Kuf. (#1654) Fixes #1653 06 April 2021, 09:31 UTC
405eb97 Update README.md (#1603) * reorganization of structure * update maintainers * update project list, including link to signature covariances project * table of contents 19 March 2021, 14:04 UTC
5c7e091 format 15 March 2021, 18:33 UTC
a9d889b Experiment: use the caching rather than fused predict_f in SVGP 15 March 2021, 18:23 UTC
5103ece _get_kernels was only used by IndependentPosterior; turn it into specialized _get_Kff method in that class 15 March 2021, 17:17 UTC
2f52c3f Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp-redesign 15 March 2021, 17:16 UTC
629e7b2 fix bug (that masked test failure!) in test_method_equivalence (#1649) * fix bug (that masked test failure!) in test_method_equivalence and improve collection speed * optimize non-whitened SVGP model more strongly to get test_equivalence to pass * remove --use-feature=2020-resolver (will become an error in pip 21.0) 15 March 2021, 17:16 UTC
380ce0f update vff notebook 15 March 2021, 15:56 UTC
984b400 Merge branch 'st/fix_test_method_equivalence' into st/new_svgp-redesign 15 March 2021, 15:44 UTC
95bf01c remove --use-feature=2020-resolver (will become an error in pip 21.0) 15 March 2021, 15:43 UTC
f691dbd optimize non-whitened SVGP model more strongly to get test_equivalence to pass 15 March 2021, 15:43 UTC
78ecd71 better handling of mean function (fixes mcmc notebook) 15 March 2021, 15:42 UTC
5a85cde minimal change to get VFF notebook to work with new Posterior objects 15 March 2021, 15:19 UTC
ef3f26a Merge branch 'st/fix_test_method_equivalence' into st/new_svgp-redesign 15 March 2021, 14:34 UTC
3d42bbf optimize non-whitened SVGP model more strongly to get test_equivalence to pass 15 March 2021, 14:31 UTC
7f86e63 fix bug (that masked test failure!) in test_method_equivalence and improve collection speed 15 March 2021, 14:11 UTC
ae9e692 add missing mean_function calls in posterior predict f 15 March 2021, 14:06 UTC
d4d8a44 another fix via mypy 15 March 2021, 12:50 UTC
a11e83f fix test_method_equivalence to only optimise *in test*, not during collection, to trace down bug (and make collecting faster!) 15 March 2021, 12:45 UTC
ad5a758 Merge branch 'st/new_svgp' into st/new_svgp-redesign 15 March 2021, 11:17 UTC
646ca7a format 15 March 2021, 11:16 UTC
d0b4556 Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp 15 March 2021, 11:15 UTC
e68e2fe only run mypy on gpflow/tests (not docs) 15 March 2021, 11:05 UTC
9f3410b fixes via mypy 15 March 2021, 10:41 UTC
ac700bb Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp-redesign 15 March 2021, 10:22 UTC
1831a5d Update README and require TensorFlow>=2.2 (#1647) Add explanation of TensorFlow/TFP dependencies (as brought up by https://github.com/GPflow/GPflow/issues/1623) 07 March 2021, 14:05 UTC
94fa390 New _add_noise_cov method for GPR model class to make it more easily extensible (#1645) 25 February 2021, 16:12 UTC
3ea8731 Compatibility between Monitor API and SciPy optimizer (#1642) Co-authored-by: st-- <st--@users.noreply.github.com> 18 February 2021, 16:29 UTC
5ffd5af use fused_predict_f in NewSVGP 03 February 2021, 14:32 UTC
406d2d0 fix ModelToTensorBoard max_size = -1 (#1619) 03 February 2021, 13:45 UTC
797fed1 Mypy build fix (#1637) 03 February 2021, 12:38 UTC
627c39b commit missing types module 03 February 2021, 10:03 UTC
7fadfd7 fix linearcoreg posterior fused 03 February 2021, 09:54 UTC
7e39e3f more fixes 02 February 2021, 18:19 UTC
65d01fe fix imports and q_sqrt=None case 02 February 2021, 18:08 UTC
8523f4d route all conditionals() through Posterior objects: fused_predict_f 02 February 2021, 17:58 UTC
3ff7923 incorporate code from posterior_conditional.py 28 January 2021, 17:14 UTC
b83864a LinearOperatorBasePosterior -- WIP 28 January 2021, 12:35 UTC
99a8ab7 introduce _set_qdist 28 January 2021, 12:35 UTC
2e08fad bugfix 28 January 2021, 12:34 UTC
25d9abd bugfix in VFF notebook (set is_Positive_definite) 28 January 2021, 12:33 UTC
5eae47a introduce Abstract base class 28 January 2021, 12:29 UTC
bc04306 Quickfix dynamic shapes in quadrature (#1626) 13 January 2021, 16:31 UTC
692ab2f Dispatcher instead of if-elif for posterior_class 13 January 2021, 14:22 UTC
696b30e move out fully_correlated path 13 January 2021, 14:22 UTC
48d2050 less adjoints 12 January 2021, 17:00 UTC
4fd77b4 clean up FUllyCorrelated branching 12 January 2021, 16:51 UTC
cb9ad16 creating additional posterior objects for cleaner structure 12 January 2021, 16:21 UTC
9f5b79b write out iv -> inducing_variable 12 January 2021, 14:39 UTC
fe731ba Merge branch 'develop' of github.com:GPflow/GPflow into st/new_svgp 12 January 2021, 14:14 UTC
0a2c2e3 add comments 12 January 2021, 14:13 UTC
721756a list structured-dgp as downstream project (#1621) Co-authored-by: st-- <st--@users.noreply.github.com> 12 January 2021, 12:31 UTC
7688477 Fix tests for TF 2.4/TFP 0.12 (#1625) * fix test_deepcopy * increase test_scipy_jit tolerance to make it pass 12 January 2021, 11:59 UTC
f6a8bf4 T -> ᵀ in math comments 11 January 2021, 15:06 UTC
c7d3b76 revert to posterior() method to fix printing 21 December 2020, 12:16 UTC
19d735f format 21 December 2020, 12:05 UTC
56c5aff code review suggestions 21 December 2020, 12:05 UTC
870baaf Apply suggestions from code review Co-authored-by: Fergus <fergus2@gmail.com> 21 December 2020, 12:03 UTC
f4cfcc9 slightly increase atol/rtol in test_scipy following Posterior / math reordering changes 21 December 2020, 12:01 UTC
47e5b78 fully correlated mok works, all multioutput tests pass. needs clean-up 18 December 2020, 03:29 UTC
735f6b0 fully correlated mok with full_cov==full_output_cov works 17 December 2020, 20:42 UTC
ff07c9c wip for more general predict_f 17 December 2020, 19:07 UTC
23e532a enable gradient flow through posterior for training 17 December 2020, 14:56 UTC
1337995 correct argument passing to Posterior 17 December 2020, 14:21 UTC
d632732 removing initial None value for the cached variables in posterior class 17 December 2020, 14:04 UTC
2fd59c6 make posterior work with parameter object w/o recreating variables 17 December 2020, 13:56 UTC
ad3b2ba black format 17 December 2020, 12:33 UTC
ba71ff1 added posterior object to new module 17 December 2020, 11:54 UTC
00c4b20 fix printing tests 16 December 2020, 21:21 UTC
ac8c585 avoid recreating parameter 16 December 2020, 18:30 UTC
b15aee1 NewSVGP posterior test 16 December 2020, 18:17 UTC
92e3176 fix imports 16 December 2020, 18:17 UTC
148a92e OldSVGP -> NewSVGP 16 December 2020, 18:05 UTC
dd2e0a5 NewSVGP 16 December 2020, 18:04 UTC
60e19f8 bump version to 2.1.4 (#1612) 01 December 2020, 11:59 UTC
61fc327 list trieste as downstream project (#1611) * list trieste as downstream project Co-authored-by: Joel Berkeley <joel.berkeley@secondmind.ai> Co-authored-by: st-- <st--@users.noreply.github.com> 26 November 2020, 17:14 UTC
282d1cd HeteroskedasticTFPConditional should construct tensors at class-construction, not at module-import time (#1598) 15 October 2020, 17:54 UTC
8562503 Replace len(inducing_variable) with inducing_variable.num inducing property (#1594) Adds support for inducing variables with dynamically changing shape. Change usage from `len(inducing_variable)` to `inducing_variable.num_inducing` instead. Resolves #1578. 08 October 2020, 15:04 UTC
9f95d87 bump version to 2.1.3 (#1590) 07 October 2020, 12:01 UTC
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