| ddf7d40 | Matt Newville | 07 February 2021, 22:30:42 UTC | faq rst fixes | 07 February 2021, 22:30:42 UTC |
| 24a569a | Matt Newville | 07 February 2021, 22:15:45 UTC | add FAQ entries for more common fitting problems | 07 February 2021, 22:15:45 UTC |
| 00361b5 | Matt Newville | 07 February 2021, 22:15:08 UTC | remove link to GSECARS conda channel | 07 February 2021, 22:15:08 UTC |
| 4edb1ea | reneeotten | 07 February 2021, 17:01:51 UTC | MAINT: update pygrep-hooks for pre-commit | 07 February 2021, 17:01:51 UTC |
| e966106 | reneeotten | 07 February 2021, 17:00:45 UTC | DOC: a few more minor corrections | 07 February 2021, 17:00:45 UTC |
| c6cd665 | reneeotten | 07 February 2021, 04:21:08 UTC | DOC: minor changes, correct typos, update links | 07 February 2021, 04:22:01 UTC |
| 802bb28 | reneeotten | 06 February 2021, 04:53:34 UTC | CI: install asteval from GitHub master branch - to remove DeprecationWarnings coming from NumPy v1.20.0; go back to the PyPI version after the next release | 07 February 2021, 00:44:50 UTC |
| 203de45 | reneeotten | 06 February 2021, 03:45:45 UTC | CI: fix running the test-suite with Python3.10-devel | 07 February 2021, 00:44:50 UTC |
| c1dd868 | Matthew Newville | 05 February 2021, 21:36:19 UTC | FIX: better support for save/load of ExpressionModel - make sure init_params and init_fit get restored for ModelResult See: https://groups.google.com/g/lmfit-py/c/osukDLEbYT8/m/ATUEu-9rBgAJ | 07 February 2021, 00:44:34 UTC |
| 2e541db | reneeotten | 06 February 2021, 03:04:13 UTC | DOC: add badge to README with link to GitHub Pages | 06 February 2021, 03:07:47 UTC |
| 8513f96 | Matt Newville | 05 February 2021, 15:09:25 UTC | Merge pull request #703 from reneeotten/documentation DOC: last changes for new release | 05 February 2021, 15:09:25 UTC |
| eaa240f | reneeotten | 05 February 2021, 03:40:34 UTC | CI: install wheel package To avoid the message: Using legacy 'setup.py install' for <package<, since package 'wheel' is not installed. | 05 February 2021, 03:42:53 UTC |
| 668910f | reneeotten | 05 February 2021, 03:34:15 UTC | CI: minimize dependencies for building documentation | 05 February 2021, 03:42:53 UTC |
| 8c6d264 | Matt Newville | 05 February 2021, 03:38:48 UTC | Merge pull request #701 from lmfit/relax_epsilon Relax epsilon, some testing updates | 05 February 2021, 03:38:48 UTC |
| 06609e8 | Matt Newville | 04 February 2021, 21:01:09 UTC | MAINT: update issue template and contributing guidelines | 05 February 2021, 02:27:51 UTC |
| d692b24 | Matt Newville | 04 February 2021, 20:08:36 UTC | TST: add test for SineModel.guess() | 05 February 2021, 02:21:23 UTC |
| c8ed043 | reneeotten | 02 February 2021, 02:34:08 UTC | REL: update publish_docs.sh | 04 February 2021, 03:34:38 UTC |
| 38ba520 | reneeotten | 02 February 2021, 02:19:08 UTC | DOC: link to documentation on GitHub Pages - add the PDF/EPUB/HTML documentation to GitHub Pages instead of linking to (outdated) https://cars9.uchicago.edu/software/python/lmfit/ | 04 February 2021, 03:34:38 UTC |
| 7888368 | reneeotten | 02 February 2021, 02:03:09 UTC | DOC: link version number to release notes in sidebar | 04 February 2021, 03:34:38 UTC |
| 29640b0 | reneeotten | 02 February 2021, 01:50:23 UTC | DOC: add entries to whatsnew.rst and thank contributors | 04 February 2021, 03:34:34 UTC |
| b6bbc28 | Matthew Newville | 03 February 2021, 04:44:03 UTC | ENH: add 'max_nfev' to basinhopping and brute methods - use more uniform values of 'max_nfev' for different optimizers | 04 February 2021, 03:22:49 UTC |
| e1bfeee | Matthew Newville | 02 February 2021, 21:47:24 UTC | TST: relax text size for save/load model | 04 February 2021, 03:22:49 UTC |
| b7a45c4 | Matthew Newville | 02 February 2021, 19:31:08 UTC | MAINT: allow SineModel phase shift to be [-2*pi:2*pi] | 04 February 2021, 03:22:49 UTC |
| ddc5a68 | Matthew Newville | 04 February 2021, 02:44:31 UTC | ENH: check for "tiny internal value" for bounded parameters If smaller than "tiny" set it to 0, avoiding "parameter not moving from initial value" See: #700 | 04 February 2021, 03:22:48 UTC |
| a87d797 | Matthew Newville | 02 February 2021, 19:26:36 UTC | ENH: increase "tiny" to 1.e-15 | 04 February 2021, 03:22:48 UTC |
| 474affa | reneeotten | 02 February 2021, 01:29:53 UTC | MAINT: remove duplicated pre-commit hook, upgrade pyupgrade hook | 04 February 2021, 01:16:54 UTC |
| 5c4e7ba | Matt Newville | 03 February 2021, 13:00:25 UTC | Merge pull request #702 from reneeotten/azure-pipelines CI: updates to Azure pipelines | 03 February 2021, 13:00:25 UTC |
| 11c280c | reneeotten | 03 February 2021, 01:14:10 UTC | CI: remove Travis and add Azure pipelines badge | 03 February 2021, 04:20:06 UTC |
| 5ed5ad7 | reneeotten | 03 February 2021, 01:32:07 UTC | TST/CI: ignore lmfit/_version.py for test coverage | 03 February 2021, 04:16:55 UTC |
| 152684e | reneeotten | 03 February 2021, 02:48:33 UTC | CI: make stage build_documentation independent | 03 February 2021, 04:16:55 UTC |
| 01d5f68 | reneeotten | 03 February 2021, 02:01:30 UTC | CI: hack to allow_failure for Python development version | 03 February 2021, 04:16:48 UTC |
| 4873f08 | reneeotten | 03 February 2021, 01:13:49 UTC | CI: collect covarage and upload to codecov.io | 03 February 2021, 03:22:38 UTC |
| 2cf42dd | Matt Newville | 02 February 2021, 14:53:19 UTC | Merge pull request #697 from lmfit/azure-pipelines Set up CI with Azure Pipelines | 02 February 2021, 14:53:19 UTC |
| 541ff62 | Matt Newville | 01 February 2021, 21:08:31 UTC | Merge pull request #694 from rbnvrw/kws_to_minimizer_emcee Add the run_mcmc_kwargs argument to Minimizer.emcee | 01 February 2021, 21:08:31 UTC |
| 999eab4 | Matt Newville | 01 February 2021, 16:59:01 UTC | Merge pull request #699 from reneeotten/fix_numpy_deprecation_warnings Fix NumPy deprecation warnings | 01 February 2021, 16:59:01 UTC |
| 35b35fd | reneeotten | 01 February 2021, 00:30:54 UTC | TST: xfail two tests when NumPy is 1.20.0 The warning message is now a DeprecationWarning from NumPy instead of the warning that is otherwise given by lmfit. The warnings come from the asteval package, so allow the tests to fail until we have resolved it. | 01 February 2021, 01:29:57 UTC |
| 0adb5ec | reneeotten | 31 January 2021, 23:20:06 UTC | MAINT: fix usage of aliases to builtin types NumPy v1.20.0 deprecated the usage aliases like np.int, np.float, np.complex, np.str, etcetera. See: https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations | 01 February 2021, 01:24:51 UTC |
| 5b6371c | reneeotten | 31 January 2021, 22:28:27 UTC | MAINT: remove use of numpy.dual, import directly from SciPy | 31 January 2021, 22:28:27 UTC |
| 8a44d2d | reneeotten | 31 January 2021, 19:45:41 UTC | MAINT: update pyupgrade pre-commit hook | 31 January 2021, 19:46:24 UTC |
| e67f02a | reneeotten | 30 January 2021, 17:13:08 UTC | DOC: add fix to release notes | 30 January 2021, 17:13:08 UTC |
| 6610187 | Till Stensitzki | 29 January 2021, 13:13:57 UTC | TST: update tests for change in encoding | 30 January 2021, 17:10:59 UTC |
| 7e34bfc | jedzill4 | 29 January 2021, 02:22:19 UTC | FIX: json encode should preserve numbers type Previously both int/float values were encoded as floats, which causes trouble with NumPy functions like np.zeros(value). Newer NumPy versions do not accept floats anymore. | 30 January 2021, 17:10:59 UTC |
| b8c5782 | Renee Otten | 30 January 2021, 01:04:15 UTC | CI: set up CI with Azure Pipelines | 30 January 2021, 17:01:11 UTC |
| 76db16a | reneeotten | 01 January 2021, 05:03:46 UTC | MAINT: update copyright year | 29 January 2021, 21:59:39 UTC |
| 9251e43 | reneeotten | 01 January 2021, 05:02:14 UTC | MAINT: update isort pre-commit hook | 29 January 2021, 21:59:39 UTC |
| 20e09ec | Matt Newville | 24 December 2020, 04:18:58 UTC | Merge pull request #695 from reneeotten/whats-new DOC: add changes in master branch to release notes | 24 December 2020, 04:18:58 UTC |
| e65e971 | reneeotten | 24 December 2020, 01:45:15 UTC | DOC: add changes in master branch to release notes - acknowledge the new contributors in THANKS.txt | 24 December 2020, 01:58:03 UTC |
| 34365eb | Ruben Verweij | 21 December 2020, 10:19:38 UTC | PR #694: Add the run_mcmc_kwargs argument to Minimizer.emcee | 21 December 2020, 10:59:15 UTC |
| c57067f | Matt Newville | 20 December 2020, 21:26:39 UTC | Merge pull request #693 from reneeotten/bump_numpy Require numpy>=1.18.0 | 20 December 2020, 21:26:39 UTC |
| 80220c3 | reneeotten | 19 December 2020, 03:13:09 UTC | CI: use scipy==1.3.2 as minimum version for Python 3.9 This is the earliest version in the 1.3-branch that can be installed using pip for Python 3.9. | 19 December 2020, 16:42:43 UTC |
| 50278d9 | reneeotten | 17 December 2020, 01:17:34 UTC | MAINT: require numpy>=1.18 NumPy v1.16 cannot be build with PY39 anymore due to the removal of "the tp_print slot of PyTypeObject" (see Python 3.9 release notes). The earliest version that works is v1.17.2 (September 2019). Just skip ahead now to version 1.18.0 (released December 22, 2019), so we still support a 1-year old version. | 17 December 2020, 01:17:42 UTC |
| 2cdd37e | reneeotten | 17 December 2020, 00:49:06 UTC | MAINT: update pre-commit-hooks | 17 December 2020, 00:49:06 UTC |
| c35f96c | reneeotten | 17 December 2020, 00:48:22 UTC | TST: skip flaky test for SineModel on macOS | 17 December 2020, 00:48:22 UTC |
| 59b04f8 | Matt Newville | 14 December 2020, 13:21:21 UTC | Merge pull request #689 from reneeotten/various_minor_changes A few minor changes to the test-suite and model.py | 14 December 2020, 13:21:21 UTC |
| b858263 | reneeotten | 14 December 2020, 05:10:52 UTC | STY: fix warning from isort pre-commit hook | 14 December 2020, 05:10:52 UTC |
| 89c475d | Matt Newville | 14 December 2020, 04:57:58 UTC | Merge pull request #688 from reneeotten/update_deps_python_versions Update supported Python and dependency versions | 14 December 2020, 04:57:58 UTC |
| 6c982f8 | Matt Newville | 14 December 2020, 04:06:55 UTC | Merge pull request #687 from reneeotten/documentation_layout DOC: updates/fixes to layout and building of documentation | 14 December 2020, 04:06:55 UTC |
| 1fbc3af | reneeotten | 13 December 2020, 21:56:23 UTC | TST: start rewrite of test_model.py to improve coverage | 13 December 2020, 21:58:15 UTC |
| 134c6d8 | reneeotten | 03 July 2020, 18:27:25 UTC | MAINT: add check for equal sized arrays Arrays for z and dz in propagate_err should be the same shape; raise a ValueError if that is not the case. | 13 December 2020, 19:21:29 UTC |
| 1126a46 | reneeotten | 03 July 2020, 17:50:15 UTC | MAINT: clarify message when raising a ValueError | 13 December 2020, 19:21:19 UTC |
| d54aa2f | reneeotten | 13 December 2020, 01:23:59 UTC | MAINT: add and run isort pre-commit hook | 13 December 2020, 16:33:18 UTC |
| a2fc065 | reneeotten | 13 December 2020, 01:18:47 UTC | MAINT: add py36-plus flag to pyupgrade - run the pre-commit hook and accept changes to formatting-strings; to fully convert the codebase this will require much more manual work... | 13 December 2020, 16:33:18 UTC |
| cb897ac | reneeotten | 13 December 2020, 01:07:50 UTC | MAINT: require scipy>=1.3 | 13 December 2020, 16:33:18 UTC |
| 90bd931 | reneeotten | 13 December 2020, 01:03:33 UTC | MAINT: officially support Python 3.9 - update dependency: asteval>=0.9.21 is required for PY39 (but will work for all), so just require it | 13 December 2020, 16:33:18 UTC |
| d6ef040 | reneeotten | 13 December 2020, 00:59:32 UTC | MAINT: officially drop support for Python 3.5 - EOL since September 5, 2020 - not tested anymore since commit 0e907a7854b589aacc21bd17a0b8166cbad20ba9 | 13 December 2020, 16:33:18 UTC |
| 4b666fb | reneeotten | 03 July 2020, 17:28:22 UTC | TST: add additional test for value.setter of Parameter class | 13 December 2020, 16:31:33 UTC |
| a8b7301 | reneeotten | 03 July 2020, 17:19:14 UTC | TST: confidence interval with sigma=None | 13 December 2020, 16:31:33 UTC |
| 574268a | reneeotten | 30 June 2020, 01:07:15 UTC | TST: remove lmfit_testutils | 13 December 2020, 16:31:33 UTC |
| 2d7715d | reneeotten | 13 December 2020, 02:19:48 UTC | DOC: fix DeprecationWarnings in examples - MatplotlibDeprecationWarning: shading='flat' when X and Y have the same dimensions as C is deprecated since 3.3. - SymPyDeprecationWarning: The list of arguments is a `set` (of function lambdify). This leads to unpredictable results has been deprecated since Sympy 1.6.3. | 13 December 2020, 16:22:02 UTC |
| 95ba362 | reneeotten | 13 December 2020, 00:45:59 UTC | CI: test building all variants for documentation | 13 December 2020, 16:22:02 UTC |
| 6e38ecb | reneeotten | 12 December 2020, 23:47:47 UTC | DOC/BLD: filter links to Gallery index from examples | 13 December 2020, 16:22:02 UTC |
| 85e04c0 | reneeotten | 07 December 2020, 02:24:10 UTC | DOC/BLD: use sphinxcontrib-svg2pdfconverter and cairosvg - convert images to PDF instead of PNG, resulting in better quality images in the PDF output - removes the dependency on ImageMagick in favor of a Python-only packages - have the Makefile targets epub depend on gallery instead of html so that it can be built separately if needed | 13 December 2020, 16:22:02 UTC |
| 55ca1be | reneeotten | 08 December 2020, 01:42:07 UTC | Revert "DOC/STY: fix issues reported by rstcheck pre-commit hook" This reverts commit c8b918e851bf63174a5608d3461b05d43b2dd801. The removal of 'nowrap' made the rstcheck pre-commit hook happy, but broke the building of EPUB/PDF documentation. Until a better fix is found, for now ignore the "math" directive when checking RST files. | 13 December 2020, 16:22:02 UTC |
| b6d3606 | reneeotten | 06 December 2020, 02:39:18 UTC | DOC: fix building epub, suppress warning about unknown mimetype | 13 December 2020, 16:22:02 UTC |
| 0ce488b | reneeotten | 07 December 2020, 03:00:34 UTC | DOC/STY: minor cleanup docstring for SineModel | 13 December 2020, 16:22:02 UTC |
| 4fd7e3f | reneeotten | 06 December 2020, 02:11:17 UTC | BLD/DOC: require sphinx-gallery >= 0.8 This version removes the matplotlib agg warning, so we do not need to do this ourselves anymore in conf.py | 13 December 2020, 16:22:02 UTC |
| b6c1ff6 | reneeotten | 06 December 2020, 01:06:09 UTC | DOC: do not show source file in sidebar | 13 December 2020, 16:22:02 UTC |
| 7f316a3 | reneeotten | 06 December 2020, 00:48:21 UTC | DOC: center titles in indexsidebar.html | 13 December 2020, 16:22:02 UTC |
| fe7a58d | reneeotten | 06 December 2020, 04:01:56 UTC | DOC: show menu also on index page | 13 December 2020, 16:22:02 UTC |
| 29e4712 | reneeotten | 06 December 2020, 01:00:46 UTC | DOC: vendor update basic/layout.html - apply the same change as in 7979699bc17e9fc97bc47c684b73fdd17002016a to render our "menu" | 13 December 2020, 16:22:02 UTC |
| 688c0e4 | reneeotten | 06 December 2020, 06:04:22 UTC | DOC: update sphinx13 layout for lmfit | 13 December 2020, 16:22:02 UTC |
| 5b1878b | reneeotten | 05 December 2020, 20:56:33 UTC | DOC: vendor and use sphinx13 theme - fixes issue with the layout of code blocks and sidebar - sidebar remains now visible when scrolling down | 13 December 2020, 16:22:02 UTC |
| b1ab243 | Matt Newville | 07 December 2020, 12:04:59 UTC | Merge pull request #685 from reneeotten/updates_to_BLD_and_CI Updates to building and Travis CI | 07 December 2020, 12:04:59 UTC |
| 8ea52a8 | reneeotten | 05 December 2020, 04:00:48 UTC | CI: build documentation and run pre-commit hooks in separate stages | 05 December 2020, 14:43:49 UTC |
| 2818c97 | reneeotten | 05 December 2020, 03:36:39 UTC | BLD: update versioneer to 0.19 | 05 December 2020, 14:43:49 UTC |
| b252475 | reneeotten | 27 November 2020, 06:08:46 UTC | DOC: minor docstring updates | 05 December 2020, 14:43:49 UTC |
| 8068098 | reneeotten | 27 November 2020, 05:52:44 UTC | BLD: remove __pycache__ directories from source archive Closes: #661 | 05 December 2020, 14:43:49 UTC |
| c8b918e | reneeotten | 27 November 2020, 05:30:45 UTC | DOC/STY: fix issues reported by rstcheck pre-commit hook | 05 December 2020, 14:43:49 UTC |
| 507e6d8 | reneeotten | 27 November 2020, 05:26:27 UTC | STY: fix issue reported by codespell pre-commit hook | 05 December 2020, 14:43:49 UTC |
| 257b977 | reneeotten | 27 November 2020, 05:21:36 UTC | STY: fix issues reported by flake8 pre-commit hook | 05 December 2020, 14:43:49 UTC |
| 15d6b8c | reneeotten | 27 November 2020, 05:13:00 UTC | MAINT: add/update pre-commit hooks | 05 December 2020, 14:43:49 UTC |
| d92c13a | reneeotten | 27 November 2020, 05:12:02 UTC | CI: test with Python 3.9 on Travis Allow for now failure with minimum versions of dependencies as these are not available on PyPI for NumPy/SciPy and they do not build either. It is probably time to update our minimum requirements of dependencies anyway, so this failure should hopefully disappear soon. | 05 December 2020, 14:43:49 UTC |
| 77e6ed8 | Matt Newville | 19 November 2020, 03:41:25 UTC | Merge pull request #681 from mstimberg/fix_Dfun_jac Fix use of callable Jacobian for scalar methods | 19 November 2020, 03:41:25 UTC |
| a70ef7e | Marcel Stimberg | 16 November 2020, 15:40:19 UTC | Fix use of callable Jacobian for scalar methods | 16 November 2020, 15:40:19 UTC |
| c3d0772 | Matt Newville | 29 October 2020, 04:07:59 UTC | Merge pull request #678 from leonfoks/master Fix #677 | 29 October 2020, 04:07:59 UTC |
| e1366fc | Leon Foks | 28 October 2020, 04:07:40 UTC | Only modify message if bytes | 28 October 2020, 04:07:40 UTC |
| 264db1e | Leon Foks | 27 October 2020, 03:02:22 UTC | added lbfgsb test to save load | 27 October 2020, 03:02:22 UTC |
| 3078a8a | Leon Foks | 27 October 2020, 02:52:58 UTC | Fix #677. Force assignment of message as str, lbfgsb method was returning a bytes object. utf-8 specification was not needed. | 27 October 2020, 02:52:58 UTC |
| 7b45bbb | Matt Newville | 27 October 2020, 02:01:01 UTC | Merge pull request #676 from lneuhaus/add-sine-model Add sine model | 27 October 2020, 02:01:01 UTC |
| 75fd53a | lneuhaus | 27 October 2020, 01:29:40 UTC | Update lmfit/models.py | 27 October 2020, 01:29:40 UTC |
