| 8e8b5d4 | guerler | 13 November 2015, 18:08:32 UTC | Remove inbound flag | 13 November 2015, 18:08:32 UTC |
| 64b0840 | Martin Cech | 13 November 2015, 15:57:55 UTC | Merge pull request #1076 from natefoo/ie-conditional-import-volume [15.10] Fix a bug in IEs when proxying the proxy | 13 November 2015, 15:57:55 UTC |
| c435141 | Nate Coraor | 13 November 2015, 15:55:25 UTC | Built image tag differs from intended. | 13 November 2015, 15:55:25 UTC |
| d824cca | Nate Coraor | 12 November 2015, 21:56:16 UTC | In interactive environments, the /import volume can now be made conditional. Also, fix a bug when using a proxy for the node proxy and cookie_path is / | 12 November 2015, 21:56:16 UTC |
| a3034ab | Björn Grüning | 12 November 2015, 02:17:33 UTC | Merge pull request #1065 from jmchilton/test_fix_3 [15.10] Testing: update casperjs functional tests; change expected size strin… | 12 November 2015, 02:17:33 UTC |
| 3a78d9d | Nicola Soranzo | 11 November 2015, 21:59:15 UTC | Merge pull request #1062 from jmchilton/test_fixes [15.10] Test timeout fixes? | 11 November 2015, 21:59:15 UTC |
| 559c89a | carlfeberhard | 19 October 2015, 19:45:13 UTC | Testing: update casperjs functional tests; change expected size string; remove nice_size from expected history api keys; remove test for rerun button on uploaded dataset; attempt to fix linux+python unicode error in hda api tests | 11 November 2015, 17:09:04 UTC |
| 6953bdf | Dannon Baker | 11 November 2015, 15:03:24 UTC | Merge pull request #1059 from guerler/fix_message_000 [15.10] Fix parsing of message configuration | 11 November 2015, 15:03:24 UTC |
| 4f72178 | Dannon Baker | 11 November 2015, 14:52:58 UTC | Merge pull request #1038 from guerler/fix_imported_rerun_000 [15.10] Fix job rerun for imported histories | 11 November 2015, 14:52:58 UTC |
| 177f73f | John Chilton | 11 November 2015, 14:43:51 UTC | Fix lower timeout caught by @nsoranzo. | 11 November 2015, 14:43:51 UTC |
| c85b0d9 | Martin Cech | 11 November 2015, 14:35:03 UTC | Merge pull request #1060 from guerler/fix_assert_000 [15.10] Fix warning statement | 11 November 2015, 14:35:03 UTC |
| e4c9f06 | John Chilton | 11 November 2015, 11:37:21 UTC | Attempt to fix timing out tests. Continuation of work started by @nsoranzo here 92a152d89c507168a6085cc34acfa13566b6eda9. In addition to increasing the max timeout it will now print the timeout in the assertion error so we can see if it is being overridden and attempt to adjust timeouts too small. | 11 November 2015, 11:37:21 UTC |
| 6580701 | guerler | 11 November 2015, 00:20:48 UTC | Fix parsing of message configuration Fix default value Add root to Galaxy object | 11 November 2015, 04:51:29 UTC |
| b2723e7 | guerler | 10 November 2015, 20:08:21 UTC | Disable invalid test case. Add validation criteria. Fix comments Fix comment | 10 November 2015, 20:36:55 UTC |
| 5603a96 | John Chilton | 10 November 2015, 19:34:11 UTC | Merge pull request #1054 from martenson/fix-datalib-hist-import [15.10] Fix datalib hist import | 10 November 2015, 19:34:11 UTC |
| b888645 | guerler | 10 November 2015, 18:45:20 UTC | Fix warning statement | 10 November 2015, 18:45:20 UTC |
| ad01646 | Marius van den Beek | 10 November 2015, 16:28:51 UTC | Fix import of history datasets into library. | 10 November 2015, 17:25:51 UTC |
| 36797b3 | Marius van den Beek | 10 November 2015, 16:37:28 UTC | Add changed static files. | 10 November 2015, 17:25:01 UTC |
| a814732 | guerler | 10 November 2015, 01:21:22 UTC | Derive permission from job outputs Remove history manager Use dataset manager | 10 November 2015, 04:58:08 UTC |
| 7e6df4f | John Chilton | 09 November 2015, 20:15:28 UTC | Merge pull request #1043 from jmchilton/release_15.10-forward-port [15.10] Forward port 15.07 fix to 15.10. | 09 November 2015, 20:15:28 UTC |
| 57d6c98 | John Chilton | 09 November 2015, 15:13:12 UTC | Merge remote-tracking branch 'jmchilton/release_15.07' into release_15.10 | 09 November 2015, 15:13:12 UTC |
| fef1e54 | guerler | 07 November 2015, 01:29:27 UTC | Fix job permission handling Catch unavailable history Fix test | 07 November 2015, 04:10:08 UTC |
| 3b8edf6 | Nate Coraor | 03 November 2015, 14:03:51 UTC | Merge pull request #1003 from dannon/remote_user_apache_fix [15.10] Fix Remote User failures due to apache null headers. | 03 November 2015, 14:03:51 UTC |
| d20677b | Dannon Baker | 29 October 2015, 16:09:45 UTC | Fix Remote User failures due to apache null headers. | 29 October 2015, 16:09:45 UTC |
| 3b133d0 | Nate Coraor | 28 October 2015, 17:26:19 UTC | Merge pull request #917 from carlfeberhard/release_15.10 [15.10] UI, list of pairs collection creator: create regexp from filters for … | 28 October 2015, 17:26:19 UTC |
| 7bcbf14 | Martin Cech | 28 October 2015, 02:16:59 UTC | Merge pull request #978 from dannon/graft_to_stable [15.10] Fix grid bulk operations | 28 October 2015, 02:16:59 UTC |
| dc9c2e4 | Dannon Baker | 21 October 2015, 21:54:40 UTC | Fix grid batch operations. This should correctly display and request confirmation for batch operations (such as delete a set of <GalaxyObjects> which is scary without a confirmation). It also fixes it to where grid bulk operations actually work in IE. | 22 October 2015, 20:06:30 UTC |
| dab1ce3 | Dannon Baker | 22 October 2015, 16:57:43 UTC | Merge pull request #973 from natefoo/composite-history-import-export [15.10] Fix for missing included files on history export and import | 22 October 2015, 16:57:43 UTC |
| dfb5900 | Vimalkumar Velayudhan | 20 July 2015, 11:30:58 UTC | Use object store for imported history datasets and included files (cherry picked from commit ea89dd8f149778b6c2f0f3f4a34c8b21f7033af7) | 22 October 2015, 16:51:48 UTC |
| 57d0620 | Vimalkumar Velayudhan | 02 July 2015, 16:26:13 UTC | Fix for missing included files on history export and import. Notes: If a history was exported previously, galaxy would just serve the cached version. In that case, it is better to make some changes to the history for example, by re-running the last job and then exporting it. Export of histories that haven't been exported previously should work without problems. (cherry picked from commit 9ea0fee48aa57361147e9145be8deaaafb2a0960) | 22 October 2015, 16:51:42 UTC |
| 3fe148d | John Chilton | 22 October 2015, 14:50:23 UTC | Merge pull request #970 from guerler/fix_history_extract_001 [15.10] Fix workflow extraction from history | 22 October 2015, 14:50:23 UTC |
| 82e9614 | Dannon Baker | 22 October 2015, 12:11:55 UTC | Merge pull request #967 from martenson/remove-reports-autorefresh [15.10] remove the autorefresh on Reports app homepage | 22 October 2015, 12:11:55 UTC |
| ab7ec7b | Dannon Baker | 21 October 2015, 22:14:53 UTC | Merge pull request #963 from blankenberg/gs_release_15.10 [15.10] Set <options sanitize="False"> for genomespace_importer.xml | 21 October 2015, 22:14:53 UTC |
| 8a0a445 | guerler | 21 October 2015, 21:36:44 UTC | Fix workflow extraction from history | 21 October 2015, 21:36:44 UTC |
| 9d3893e | guerler | 21 October 2015, 21:26:33 UTC | Undo commit, wrong branch | 21 October 2015, 21:26:33 UTC |
| ee32770 | guerler | 21 October 2015, 20:56:10 UTC | Fix workflow extraction from history Fix history extraction by returning value dictionary Remove previous fix | 21 October 2015, 21:20:42 UTC |
| f3bfa2f | Martin Cech | 21 October 2015, 18:22:41 UTC | remove the autorefresh on Reports app because of how long each page takes on Main the request for a subpage would timeout because new autorefresh request would be automatically issued | 21 October 2015, 18:22:41 UTC |
| 92666cd | Eric Rasche | 21 October 2015, 17:02:50 UTC | Merge pull request #965 from dannon/login_req [15.10] Fix endless redirect cycle when login is required | 21 October 2015, 17:02:50 UTC |
| 6f5aafe | Dannon Baker | 21 October 2015, 16:19:00 UTC | For require_login=True, redirect directly to login without showing empty (and broken) looking panels, and potentially hitting an endless reload cycle. | 21 October 2015, 16:19:00 UTC |
| a02e0f1 | Daniel Blankenberg | 21 October 2015, 15:33:45 UTC | Set <options sanitize="False"> for genomespace_importer.xml | 21 October 2015, 15:33:45 UTC |
| d53e13a | Dannon Baker | 20 October 2015, 19:51:53 UTC | Merge pull request #958 from martenson/fix-google-analytics [15.10] Fix google analytics on the analysis page | 20 October 2015, 19:51:53 UTC |
| 732b4f5 | Martin Cech | 20 October 2015, 19:11:22 UTC | fix missing analytics on the analysis page we abandoned base_panels for this page so the script was missing | 20 October 2015, 19:11:22 UTC |
| 0f9067d | Dannon Baker | 20 October 2015, 19:11:17 UTC | Merge pull request #957 from guerler/fix_trackster_001 [15.10] Fixed missing trackster navigation pane (issue #946) | 20 October 2015, 19:11:17 UTC |
| dd2d696 | guerler | 20 October 2015, 18:53:33 UTC | Fixed missing trackster navigation pane (issue #946) Please enter the commit message for your changes. Lines starting | 20 October 2015, 18:53:33 UTC |
| b7dfeb4 | Daniel Blankenberg | 19 October 2015, 13:55:50 UTC | Merge pull request #934 from martenson/fix-showing-deleted-libs [15.10] fix the filter on search results to not show the public deleted libs | 19 October 2015, 13:55:50 UTC |
| 47ce939 | Martin Cech | 16 October 2015, 17:14:44 UTC | remove log | 16 October 2015, 17:14:44 UTC |
| 15a8c59 | Martin Cech | 16 October 2015, 17:12:53 UTC | fix the filter on deleted libraries to not show the public deleted libs by default | 16 October 2015, 17:12:53 UTC |
| 11d17b3 | Nate Coraor | 15 October 2015, 04:02:21 UTC | Merge pull request #920 from dannon/release_15.10 [15.10] IE11 history-stuck fix | 15 October 2015, 04:02:21 UTC |
| a742198 | Dannon Baker | 15 October 2015, 01:57:23 UTC | Fixes for switching history (standard as well as multiview) when using IE11. Intentionally minimal fix for 15.10, more comprehensive refactoring+solution forthcoming for dev. | 15 October 2015, 01:57:23 UTC |
| 4f4526b | Martin Cech | 14 October 2015, 22:36:53 UTC | deprecate old Data Libraries | 14 October 2015, 22:36:53 UTC |
| 0911287 | carlfeberhard | 14 October 2015, 17:20:19 UTC | UI, list of pairs collection creator: create regexp from filters for name creation | 14 October 2015, 17:20:19 UTC |
| b7bf42e | John Chilton | 07 October 2015, 15:44:57 UTC | Fill in release notes for 15.10. | 14 October 2015, 16:05:06 UTC |
| bbef5ed | John Chilton | 06 October 2015, 13:47:16 UTC | Improvements to release notes generation. - Add last commit for 15.10 (need to automate finding that). - Generate next release annoucement. - Generate annoucement for this release. - Respect the minor tag. | 14 October 2015, 16:04:49 UTC |
| cf59e8b | John Chilton | 14 October 2015, 14:45:36 UTC | Merge pull request #913 from blankenberg/cut_15.10 [15.10] Fix command quoting and remove size from text input for Cut tool. | 14 October 2015, 14:45:36 UTC |
| 120ec61 | Daniel Blankenberg | 14 October 2015, 14:11:21 UTC | Fix command quoting and remove size from text input for Cut tool. | 14 October 2015, 14:11:21 UTC |
| 50c27ac | John Chilton | 14 October 2015, 13:57:36 UTC | Merge pull request #885 from ericenns/fix_gsummary_in_release_15.07 [15.07] Fix gsummary in release 15.07 | 14 October 2015, 13:57:36 UTC |
| ee42fd0 | John Chilton | 14 October 2015, 13:47:01 UTC | Merge pull request #910 from carlfeberhard/release_15.10 [15.10] Some minor fixes to the history UI | 14 October 2015, 13:47:01 UTC |
| 0ec1b17 | Eric Enns | 14 October 2015, 13:28:30 UTC | Update list comprehension to go through headings instead of summary so that we output in the order we want. | 14 October 2015, 13:28:30 UTC |
| 03c7aae | carlfeberhard | 13 October 2015, 21:25:50 UTC | UI, histories: disable user-select on dataset selectors to prevent text select/highlight when using shift to select a range | 13 October 2015, 21:25:50 UTC |
| 41069e8 | carlfeberhard | 13 October 2015, 21:15:56 UTC | UI, histories: fix/reverse order for drag and drop dataset copy | 13 October 2015, 21:15:56 UTC |
| 34a11d1 | carlfeberhard | 13 October 2015, 20:49:38 UTC | UI, histories: fix default empty message for lazy loaded panels in multi-view | 13 October 2015, 20:49:38 UTC |
| 99fab6f | carlfeberhard | 13 October 2015, 20:16:43 UTC | UI, histories: on first history search, use current searchFor value at callback and not value when ajax began | 13 October 2015, 20:16:43 UTC |
| b470843 | carlfeberhard | 13 October 2015, 19:41:21 UTC | UI, histories: fix multiview button to be logged-in users only | 13 October 2015, 19:41:21 UTC |
| 6c5f6e3 | Dannon Baker | 12 October 2015, 19:59:12 UTC | Merge pull request #878 from martenson/datalib-fixes-release [15.10] Release Fixes for Data Libraries | 12 October 2015, 19:59:12 UTC |
| ad4458a | Eric Enns | 09 October 2015, 15:34:20 UTC | Revert to previous changes if using rpy2 | 09 October 2015, 15:34:20 UTC |
| ad20452 | Eric Enns | 09 October 2015, 15:08:48 UTC | Fix output to print values and not hash key | 09 October 2015, 15:08:48 UTC |
| 38b9ca3 | Dannon Baker | 08 October 2015, 20:15:00 UTC | Merge pull request #879 from blankenberg/datamanager-fix [15.10] Fix for no longer being able to access data managers. | 08 October 2015, 20:15:00 UTC |
| 90506ba | Daniel Blankenberg | 08 October 2015, 19:39:25 UTC | Fix for no longer being able to access data managers. Have datamanager links point to root with tool_id provided while targeting a new window. | 08 October 2015, 19:39:25 UTC |
| 251f390 | Martin Cech | 08 October 2015, 19:23:46 UTC | fix the ordering of folder controls to match library's also fix the active area of 'include deleted' checkbox | 08 October 2015, 19:25:32 UTC |
| fe8dbd8 | Martin Cech | 08 October 2015, 19:09:24 UTC | fix problems with multiple bindings of view events; drop attempts at caching the libraries - need to study more for that | 08 October 2015, 19:25:31 UTC |
| 775ee33 | Martin Cech | 07 October 2015, 20:24:16 UTC | fix options default order to fix bug with improper page being rendered also add missing comma for previous commit | 08 October 2015, 19:25:31 UTC |
| 39f5b7a | Martin Cech | 07 October 2015, 20:09:20 UTC | show proper message when search has no results | 08 October 2015, 19:25:31 UTC |
| 2d4bd2e | Martin Cech | 07 October 2015, 18:38:15 UTC | fix the ordering and margins of lib toolbar items | 08 October 2015, 19:25:31 UTC |
| 60a1b45 | Martin Cech | 05 October 2015, 20:07:48 UTC | make lib search case insensitive | 08 October 2015, 19:25:31 UTC |
| a0ad2b7 | Daniel Blankenberg | 08 October 2015, 16:19:31 UTC | Merge pull request #873 from erasche/api-key-backpatch [release_15.10] Expose all API keys to admins under REMOTE_USER | 08 October 2015, 16:19:31 UTC |
| 4705409 | Eric Rasche | 08 October 2015, 15:15:14 UTC | Expose all API keys to admins under REMOTE_USER This is the default setting for non-remote-user setups, this commit adjusts the middleware to behave as expected. Issue raised in http://dev.list.galaxyproject.org/User-API-keys-with-External-LDAP-authentication-disabled-td4668052.html | 08 October 2015, 15:22:41 UTC |
| 69cd5a9 | Björn Grüning | 06 October 2015, 16:29:37 UTC | Merge pull request #854 from carlfeberhard/release_15.10 [15.10] UI, Collections: allow expansion to fetch details for DatasetDCEs (as… | 06 October 2015, 16:29:37 UTC |
| 31c89ea | carlfeberhard | 06 October 2015, 13:49:16 UTC | UI, Collections: allow expansion to fetch details for DatasetDCEs (assuming they're HDAs); move rerunnable and creating_job fetch to HDAs | 06 October 2015, 13:49:16 UTC |
| cc23adb | Nate Coraor | 06 October 2015, 04:02:07 UTC | Merge pull request #843 from jmchilton/text_file_busy_2 Allow reuse of parent /tmp directory in dockerized testing. | 06 October 2015, 04:02:07 UTC |
| b5b36c0 | Nate Coraor | 06 October 2015, 04:00:28 UTC | Merge pull request #849 from erasche/gie-pinning-15.10 GIE pinning 15.10 | 06 October 2015, 04:00:28 UTC |
| 092fc17 | Daniel Blankenberg | 05 October 2015, 21:05:56 UTC | Merge pull request #846 from jmchilton/ucsc_cleanup UCSC Tool Cleanup | 05 October 2015, 21:05:56 UTC |
| f90c49e | Martin Cech | 05 October 2015, 21:01:18 UTC | Merge pull request #847 from jmchilton/citations_5 Add more distribution tool citations. | 05 October 2015, 21:01:18 UTC |
| 3201005 | Dannon Baker | 05 October 2015, 20:21:22 UTC | Merge pull request #850 from martenson/forgotten-minification forgoten minification and map | 05 October 2015, 20:21:22 UTC |
| 053f51e | Martin Cech | 05 October 2015, 20:16:23 UTC | forgoten minification and map | 05 October 2015, 20:16:23 UTC |
| e9a3ec9 | Eric Rasche | 05 October 2015, 19:51:51 UTC | Update faq.rst | 05 October 2015, 19:51:51 UTC |
| 5f4502b | Eric Rasche | 05 October 2015, 19:50:35 UTC | Pin images for next release of Galaxy | 05 October 2015, 19:50:35 UTC |
| 4cd4dac | John Chilton | 05 October 2015, 19:44:56 UTC | Merge pull request #848 from jmchilton/echo_remove Remove unused echo tool | 05 October 2015, 19:44:56 UTC |
| 753bb9d | Martin Cech | 05 October 2015, 18:57:16 UTC | Merge pull request #839 from jmchilton/text_file_busy Attempt to fix "Text file busy" errors (testing and production) | 05 October 2015, 18:57:16 UTC |
| bb43ace | Martin Cech | 05 October 2015, 18:55:30 UTC | Merge pull request #842 from bgruening/filter_by_attribute Update documentation for the gff_filter_by_attribute tool | 05 October 2015, 18:55:30 UTC |
| 3687d45 | Björn Grüning | 05 October 2015, 18:37:51 UTC | Merge pull request #838 from nsoranzo/pkg_resources Use eggs.require() instead of pkg_resources in lib/galaxy/datatypes/ . | 05 October 2015, 18:37:51 UTC |
| 0a83a24 | Dannon Baker | 05 October 2015, 18:35:54 UTC | Merge pull request #844 from jmchilton/run_test_adjustments More small adjustments to test script. | 05 October 2015, 18:35:54 UTC |
| 6430b9c | Björn Grüning | 05 October 2015, 16:43:36 UTC | Update documentation for the gff_filter_by_attribute tool | 05 October 2015, 16:43:36 UTC |
| a6f9e62 | John Chilton | 05 October 2015, 14:02:01 UTC | Add citations to ucsc browser tools. | 05 October 2015, 14:55:21 UTC |
| 1aebbc3 | John Chilton | 05 October 2015, 14:00:28 UTC | Remove likely broken UCSC proxy and associated tools. Unused for many, many years and likely no longer works. | 05 October 2015, 14:55:21 UTC |
| 7dcd263 | carlfeberhard | 05 October 2015, 14:39:15 UTC | Merge pull request #820 from martenson/lib-search Initial implementation of data library search | 05 October 2015, 14:39:15 UTC |
| f50702f | Eric Rasche | 17 June 2015, 00:24:36 UTC | Remove unused echo tool | 05 October 2015, 14:21:39 UTC |
| 88239ab | John Chilton | 05 October 2015, 14:16:16 UTC | Add more distribution tool citations. xref #361. | 05 October 2015, 14:16:50 UTC |
| 5915190 | John Chilton | 05 October 2015, 14:12:46 UTC | Add citations to a few more tools. | 05 October 2015, 14:12:46 UTC |
| 51a3f54 | Martin Cech | 05 October 2015, 14:12:31 UTC | Merge pull request #841 from dannon/default_debug_off Update comment in sample. | 05 October 2015, 14:12:31 UTC |
| e3364d6 | Dannon Baker | 05 October 2015, 14:11:03 UTC | Update comment in sample. | 05 October 2015, 14:11:03 UTC |
