| 24220e2 | Jim Allman | 21 March 2023, 17:48:30 UTC | Enable reference-select behavior | 21 March 2023, 17:48:30 UTC |
| 44afadf | Jim Allman | 21 March 2023, 17:24:52 UTC | Load study list AFTER tab is properly loaded Otherwise we have no reliable test for the Analyses tab | 21 March 2023, 17:24:52 UTC |
| 2cea0f0 | Jim Allman | 21 March 2023, 16:39:56 UTC | Init lookup form AFTER reaching new tab | 21 March 2023, 16:39:56 UTC |
| 7e5c9d8 | Jim Allman | 21 March 2023, 16:26:06 UTC | Load study list (for lookup) on page load | 21 March 2023, 16:26:06 UTC |
| b8d9e5a | Jim Allman | 21 March 2023, 16:19:01 UTC | Generalize form init and action selectors | 21 March 2023, 16:19:01 UTC |
| d05fbf3 | Jim Allman | 21 March 2023, 03:24:07 UTC | Wrap optional UI in hidden DIV | 21 March 2023, 03:24:07 UTC |
| 2530f42 | Jim Allman | 14 March 2023, 17:58:51 UTC | Show basic feedback on incoming tree URL | 14 March 2023, 17:59:33 UTC |
| fc04be9 | Jim Allman | 14 March 2023, 17:19:57 UTC | Parse incoming URL to get study+tree ids | 14 March 2023, 17:19:57 UTC |
| dfce484 | Jim Allman | 14 March 2023, 17:03:11 UTC | Mock up conflict info in case of errors | 14 March 2023, 17:03:11 UTC |
| e529a5a | Jim Allman | 14 March 2023, 16:58:09 UTC | Revert "Remove call w/o conflict details" This reverts commit 0a8706b92088df8ff24d02086d9cc731a1825325. | 14 March 2023, 16:58:09 UTC |
| 0a8706b | Jim Allman | 14 March 2023, 16:52:22 UTC | Remove call w/o conflict details | 14 March 2023, 16:52:22 UTC |
| e993c36 | Jim Allman | 14 March 2023, 16:44:06 UTC | Working through alternative cases... | 14 March 2023, 16:45:35 UTC |
| 81f8380 | Jim Allman | 14 March 2023, 16:33:24 UTC | Isolate UI refresh for incoming URLs? | 14 March 2023, 16:33:24 UTC |
| d84fd21 | Jim Allman | 14 March 2023, 15:33:48 UTC | Update study+tree selectors even if conflict fails | 14 March 2023, 15:33:48 UTC |
| 3ed0399 | Jim Allman | 14 March 2023, 15:18:12 UTC | Cosmetic tweaks; prep for incoming URL | 14 March 2023, 15:19:21 UTC |
| 652a00a | Jim Allman | 14 March 2023, 06:22:14 UTC | Use '@' instead of '#' (else History breaks) This is a slightly confusing hack. Suffice to say that the browser's History (session history) ignores URL fragments signified by '#', so it doesn't recognize when we choose a different target tree in the same study. Encoding it as '%23' in the History state doesn't seem to matter, as it's decoded when the address bar is updated. By substituting '@' in our code and URLs, we should satisfy both History and the conflict API, which expects to see '%23' | 14 March 2023, 06:22:14 UTC |
| 33fb973 | Jim Allman | 14 March 2023, 04:55:36 UTC | More safety for dangerous # in URL | 14 March 2023, 04:55:36 UTC |
| f741da9 | Jim Allman | 14 March 2023, 04:26:44 UTC | Double encode non-hash octothorpe in URL? | 14 March 2023, 04:26:44 UTC |
| 3d6ef6f | Jim Allman | 14 March 2023, 03:52:39 UTC | Encode URI for conflict info | 14 March 2023, 03:52:39 UTC |
| 283302b | Jim Allman | 14 March 2023, 03:03:34 UTC | Gather study+tree IDs for API call (and history) | 14 March 2023, 03:03:34 UTC |
| da60a21 | Jim Allman | 14 March 2023, 00:03:33 UTC | Alignment fixes | 14 March 2023, 00:03:33 UTC |
| 82f6253 | Jim Allman | 13 March 2023, 23:31:47 UTC | Refactor CSS to show link to selected study | 13 March 2023, 23:31:47 UTC |
| 11e62cc | Jim Allman | 13 March 2023, 22:55:33 UTC | Load study list and (re)bind UI as needed | 13 March 2023, 22:55:33 UTC |
| 1c1c15a | Jim Allman | 13 March 2023, 22:29:22 UTC | Cleanup for alt contexts | 13 March 2023, 22:29:22 UTC |
| 15004ca | Jim Allman | 13 March 2023, 21:59:15 UTC | Add results list for study+tree lookup | 13 March 2023, 21:59:15 UTC |
| 5af1a1c | Jim Allman | 13 March 2023, 21:48:58 UTC | comment cleanup | 13 March 2023, 21:48:58 UTC |
| 5ee7dce | Jim Allman | 13 March 2023, 19:00:16 UTC | Refactoring for multiple contexts | 13 March 2023, 19:00:16 UTC |
| 1d2e408 | Jim Allman | 13 March 2023, 16:50:23 UTC | Remove extra GO button | 13 March 2023, 16:50:23 UTC |
| b1d0062 | Jim Allman | 07 March 2023, 18:40:42 UTC | Add cloned UI for study+tree lookup | 07 March 2023, 18:40:42 UTC |
| d2c7c51 | Jim Allman | 07 March 2023, 18:28:20 UTC | typo | 07 March 2023, 18:28:20 UTC |
| 8422934 | Jim Allman | 07 March 2023, 18:22:57 UTC | Extra test for single-tree viewer | 07 March 2023, 18:22:57 UTC |
| 7c5372d | Jim Allman | 07 March 2023, 18:12:11 UTC | Dynamic UI for single-tree popup | 07 March 2023, 18:12:11 UTC |
| d65bc53 | Jim Allman | 07 March 2023, 13:55:49 UTC | Merge branch 'master' into conflict-with-source-tree2 | 07 March 2023, 13:55:49 UTC |
| 5aa3602 | Mark T. Holder | 28 February 2023, 19:18:31 UTC | Merge pull request #1303 from OpenTreeOfLife/allow-reusing-taxon-names Allow reusing taxon names | 28 February 2023, 19:18:31 UTC |
| 3685a14 | Jim Allman | 28 February 2023, 06:40:00 UTC | Improvemed warning messages | 28 February 2023, 06:40:00 UTC |
| 4a02c2d | Jim Allman | 28 February 2023, 06:32:53 UTC | Relax our blocking of new taxa with existing names This was previously blocked, but we want to allow for this. | 28 February 2023, 06:32:53 UTC |
| dafb269 | Jim Allman | 28 February 2023, 06:17:31 UTC | Merge pull request #1292 from OpenTreeOfLife/2nexml-missing-bug fix of misleading error message on misconfigure | 28 February 2023, 06:17:31 UTC |
| 5b1bd31 | Jim Allman | 20 February 2023, 18:56:11 UTC | Add study+tree ID option for tree conflict | 20 February 2023, 18:56:11 UTC |
| bdb9edb | Jim Allman | 14 February 2023, 18:21:18 UTC | Try to stop extra study-search results This pops up a list of matching studies, even AFTER someone has selected one. Hopefully killing the timeout immediately will fix this. | 14 February 2023, 18:21:18 UTC |
| 8ccd624 | Jim Allman | 14 February 2023, 17:11:23 UTC | Fix study-lookup reset | 14 February 2023, 17:11:23 UTC |
| 0576509 | Jim Allman | 14 February 2023, 17:03:27 UTC | Find container to reset study lookup | 14 February 2023, 17:03:27 UTC |
| a5a8be7 | Jim Allman | 14 February 2023, 16:58:31 UTC | Smarter test for collection editor | 14 February 2023, 16:58:31 UTC |
| 6b454e5 | Jim Allman | 10 February 2023, 19:57:52 UTC | Return missing value | 10 February 2023, 19:57:52 UTC |
| 23b865b | Jim Allman | 30 January 2023, 23:03:54 UTC | More prep for flexible tree+study lookup | 30 January 2023, 23:03:54 UTC |
| dd1f404 | Jim Allman | 30 January 2023, 18:49:18 UTC | Add context test for study+tree lookup UI | 30 January 2023, 18:49:18 UTC |
| 1fb1d2c | Jim Allman | 20 January 2023, 18:15:10 UTC | Quickly determine context for tree/study search UI | 20 January 2023, 18:15:10 UTC |
| d2f83fd | Jim Allman | 13 January 2023, 03:19:23 UTC | Enhanced conflict UI for Analysis tab This adds choosers for study+tree (not yet enabled) on a second row. | 13 January 2023, 03:19:23 UTC |
| 0a64c04 | Jim Allman | 12 January 2023, 20:13:30 UTC | Add source-tree option to Analysis tab UI | 12 January 2023, 20:13:30 UTC |
| 37fc875 | Mark T. Holder | 09 January 2023, 22:14:58 UTC | trying python3 as exe | 09 January 2023, 22:14:58 UTC |
| 9ba3f78 | Mark T. Holder | 06 January 2023, 15:14:55 UTC | fix of misleading error message on misconfigure | 06 January 2023, 15:14:55 UTC |
| f9bace1 | Mark T. Holder | 13 December 2022, 19:18:42 UTC | Merge pull request #1290 from OpenTreeOfLife/fix-taxonomy-browser Update taxonomy browser to python3 | 13 December 2022, 19:18:42 UTC |
| 003484b | Jim Allman | 09 December 2022, 18:56:32 UTC | Update to use python3 | 09 December 2022, 18:56:32 UTC |
| b84bbf9 | Jim Allman | 20 September 2022, 23:49:54 UTC | Adding lock file for jQueryFileUpload | 20 September 2022, 23:49:54 UTC |
| a49f5ec | Jim Allman | 20 September 2022, 23:49:13 UTC | Attempted fixes for jQueryFileUpload | 20 September 2022, 23:49:13 UTC |
| 5e3bd4d | Jim Allman | 20 September 2022, 23:22:22 UTC | Updated bundled JS file for TNRS | 20 September 2022, 23:22:22 UTC |
| 78744db | Jim Allman | 19 September 2022, 19:05:37 UTC | Fix npm engine requirements in package.json | 19 September 2022, 19:05:37 UTC |
| 8008560 | Jim Allman | 19 September 2022, 18:55:22 UTC | Restore actual fix for URL-slash bug Also adding some clarifying code when user is on the read-only View Study page. | 19 September 2022, 18:55:22 UTC |
| a118c80 | Jim Allman | 19 September 2022, 18:48:54 UTC | Merge remote-tracking branch 'origin/master' into fix-for-frozen-bulk-tnrs | 19 September 2022, 18:48:54 UTC |
| 871feeb | Emily Jane McTavish | 12 September 2022, 19:25:47 UTC | Merge pull request #1279 from OpenTreeOfLife/smarter-csv-parsing Smarter CSV parsing | 12 September 2022, 19:25:47 UTC |
| 4b31034 | Mark T. Holder | 29 August 2022, 18:13:40 UTC | Merge pull request #1283 from OpenTreeOfLife/fix-delete-collection-button Fix delete collection button | 29 August 2022, 18:13:40 UTC |
| d3c6d88 | Jim Allman | 19 August 2022, 19:07:17 UTC | Fix massive typo on Delete Collection button | 19 August 2022, 19:07:17 UTC |
| 6147111 | Jim Allman | 19 August 2022, 19:05:44 UTC | Revert "typo" This reverts commit 99cd5329c5d6357f650db6a3eb1a29fe237e0ec7. | 19 August 2022, 19:05:44 UTC |
| f1ad596 | Jim Allman | 19 August 2022, 18:57:01 UTC | typo | 19 August 2022, 19:05:05 UTC |
| 036a822 | Emily Jane McTavish | 12 August 2022, 22:04:27 UTC | Merge pull request #1282 from OpenTreeOfLife/data-license data license info | 12 August 2022, 22:04:27 UTC |
| cc66d5e | Jim Allman | 09 August 2022, 23:46:59 UTC | Adjusted data-rights language based on feedback | 09 August 2022, 23:46:59 UTC |
| bd9d537 | snacktavish | 07 July 2022, 19:12:32 UTC | data license info | 07 July 2022, 19:12:32 UTC |
| 0414157 | Jim Allman | 29 June 2022, 00:12:59 UTC | Fix for frozen bulk-TNRS w/o trailing slash Fixes a user-reported bug. There's no Github issue for this, but I believe there's a discussion on Gitter or in our ot-dev meeting notes. | 29 June 2022, 00:12:59 UTC |
| a5ff6c7 | Jim Allman | 20 April 2022, 04:13:25 UTC | Remove chatter; try to support CSV delimiter ', ' | 20 April 2022, 04:13:25 UTC |
| 27b955d | Mark T. Holder | 19 April 2022, 18:55:40 UTC | pinning | 20 April 2022, 00:10:09 UTC |
| c6ec328 | Jim Allman | 20 April 2022, 00:09:14 UTC | Merge pull request #1280 from OpenTreeOfLife/pinned-jwcrypto-v pinning | 20 April 2022, 00:09:14 UTC |
| 83f5430 | Mark T. Holder | 19 April 2022, 18:55:40 UTC | pinning | 19 April 2022, 18:55:40 UTC |
| a3f24a7 | Jim Allman | 19 April 2022, 16:13:01 UTC | Remove console chatter | 19 April 2022, 16:13:01 UTC |
| 2005144 | Jim Allman | 19 April 2022, 16:00:16 UTC | Show errors if parsing failed/aborted If some of the nameset was OK, we just send these details to the JS console. If parsing actually fails/aborts, we show all the gory details in the footer so a savvy contributor can try to fix their own data. | 19 April 2022, 16:00:16 UTC |
| 25d0c15 | Jim Allman | 19 April 2022, 07:07:15 UTC | Update TNRS bundle file | 19 April 2022, 07:07:15 UTC |
| f1bf5f5 | Jim Allman | 19 April 2022, 06:41:24 UTC | typo | 19 April 2022, 07:06:53 UTC |
| d43c50e | Jim Allman | 19 April 2022, 06:18:18 UTC | Use Papa Parse to parse CSV and TSV names | 19 April 2022, 06:18:18 UTC |
| 37958b3 | Jim Allman | 19 April 2022, 03:56:06 UTC | Update TNRS bundle with security + papaparse | 19 April 2022, 03:56:06 UTC |
| 81e2325 | Jim Allman | 19 April 2022, 03:52:01 UTC | Audit/fix all Node vulnerablilities in TNRS | 19 April 2022, 03:52:01 UTC |
| 44417be | Jim Allman | 19 April 2022, 03:50:34 UTC | Install papaparse via NPM | 19 April 2022, 03:50:34 UTC |
| 1a3b8f8 | Jim Allman | 19 April 2022, 03:40:06 UTC | Note to add explicit test for Windows line endings | 19 April 2022, 03:40:06 UTC |
| a713502 | Jim Allman | 29 November 2021, 16:30:10 UTC | Tweak README to use relative paths | 29 November 2021, 16:30:10 UTC |
| c421ebe | Jim Allman | 17 November 2021, 17:24:11 UTC | Updating Node dependencies to fix vulnerabilities. NB - While the master branch had an up-to-date package.json file, we also need to update the resulting bundle! | 17 November 2021, 17:24:11 UTC |
| b2f56c7 | Jim Allman | 27 October 2021, 18:30:20 UTC | Merge pull request #1273 from OpenTreeOfLife/dependabot/npm_and_yarn/curator/static/js/tnrs/jszip-3.7.0 Bump jszip from 3.1.3 to 3.7.0 in /curator/static/js/tnrs | 27 October 2021, 18:30:20 UTC |
| f1cdb44 | dependabot[bot] | 27 October 2021, 18:28:46 UTC | Bump jszip from 3.1.3 to 3.7.0 in /curator/static/js/tnrs Bumps [jszip](https://github.com/Stuk/jszip) from 3.1.3 to 3.7.0. - [Release notes](https://github.com/Stuk/jszip/releases) - [Changelog](https://github.com/Stuk/jszip/blob/master/CHANGES.md) - [Commits](https://github.com/Stuk/jszip/compare/v3.1.3...v3.7.0) --- updated-dependencies: - dependency-name: jszip dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com> | 27 October 2021, 18:28:46 UTC |
| da203d6 | Jim Allman | 27 October 2021, 18:28:19 UTC | Merge pull request #1257 from OpenTreeOfLife/dependabot/npm_and_yarn/curator/static/js/tnrs/elliptic-6.5.4 Bump elliptic from 6.5.3 to 6.5.4 in /curator/static/js/tnrs | 27 October 2021, 18:28:19 UTC |
| fda58d4 | Jim Allman | 27 October 2021, 18:26:32 UTC | Merge pull request #1270 from OpenTreeOfLife/dependabot/npm_and_yarn/curator/static/js/tnrs/path-parse-1.0.7 Bump path-parse from 1.0.6 to 1.0.7 in /curator/static/js/tnrs | 27 October 2021, 18:26:32 UTC |
| 1cd8c41 | dependabot[bot] | 11 August 2021, 01:08:58 UTC | Bump path-parse from 1.0.6 to 1.0.7 in /curator/static/js/tnrs Bumps [path-parse](https://github.com/jbgutierrez/path-parse) from 1.0.6 to 1.0.7. - [Release notes](https://github.com/jbgutierrez/path-parse/releases) - [Commits](https://github.com/jbgutierrez/path-parse/commits/v1.0.7) --- updated-dependencies: - dependency-name: path-parse dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com> | 11 August 2021, 01:08:58 UTC |
| d2789fa | Jim Allman | 22 June 2021, 03:12:54 UTC | Merge pull request #1267 from OpenTreeOfLife/synth13.4 Merging after review and test (parse as JSON) of the latest stats files. | 22 June 2021, 03:12:54 UTC |
| 9a42c58 | Mark T. Holder | 18 June 2021, 20:55:59 UTC | new stats | 18 June 2021, 20:55:59 UTC |
| 87bbc48 | Mark T. Holder | 17 May 2021, 17:34:06 UTC | Merge pull request #1262 from OpenTreeOfLife/otu-mapping-fixes OTU mapping fixes | 17 May 2021, 17:34:06 UTC |
| d66c703 | Jim Allman | 13 May 2021, 16:19:33 UTC | Merge branch 'auto-accept-exact-matches-and-synonyms' | 13 May 2021, 16:19:33 UTC |
| e6df0d6 | Mark T. Holder | 13 May 2021, 15:19:53 UTC | Merge pull request #1263 from OpenTreeOfLife/import-tnrs-nameset-in-curation Import TNRS nameset in curation | 13 May 2021, 15:19:53 UTC |
| 603acdc | Jim Allman | 12 May 2021, 19:54:15 UTC | Clarify callable options for bulk-TNRS mapping | 12 May 2021, 19:54:15 UTC |
| 4e05f28 | Jim Allman | 12 May 2021, 19:47:06 UTC | Adapt auto-acceptance for bulk TNRS | 12 May 2021, 19:47:06 UTC |
| 06ac1f1 | Jim Allman | 12 May 2021, 19:42:11 UTC | Add auto-accept to bulk-TNRS nameset model | 12 May 2021, 19:42:11 UTC |
| 40d0104 | Jim Allman | 12 May 2021, 19:27:45 UTC | Fix binding of auto-accept checkbox | 12 May 2021, 19:27:45 UTC |
| 4207407 | Jim Allman | 12 May 2021, 19:18:10 UTC | typo | 12 May 2021, 19:18:10 UTC |
| f2028b8 | Jim Allman | 12 May 2021, 19:12:44 UTC | Add auto-accept mapping hint to existing studies. | 12 May 2021, 19:12:44 UTC |
| 479e0be | Jim Allman | 12 May 2021, 18:27:12 UTC | Allow auto-accept of exact taxon name or synonym If this works properly in the OTU Mapping tab of the study curator, adapt these changes for use in the bulk TNRS tool. | 12 May 2021, 18:27:12 UTC |
| 586da0a | Jim Allman | 12 May 2021, 01:39:34 UTC | Cleanup of shared nameset popup | 12 May 2021, 01:39:34 UTC |
