https://github.com/afni/afni

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Revision Author Date Message Commit Date
02aca31 version update 14 January 2021, 20:23:02 UTC
566fd56 tweak 3dttest++ -ETAC to use 'XXX*.nii*' for reading lists of ETAC masks, as some people (PAT) seem to have auto-gzip for .nii files enabled, so 'XXX*.nii' fails 14 January 2021, 19:26:30 UTC
512e527 add lots of comments to imseq.c and afni_graph.c 14 January 2021, 14:56:50 UTC
45af4da replace deviance with RMSE in 3dMSS 12 January 2021, 18:38:33 UTC
b07e0d5 Merge branch 'master' of https://github.com/afni/afni 11 January 2021, 21:35:06 UTC
bd4a5f1 tweak boxed graph label location 11 January 2021, 21:34:56 UTC
7c2e0ca version update 11 January 2021, 20:32:35 UTC
8b819ba Merge branch 'master' of https://github.com/afni/afni 11 January 2021, 19:37:26 UTC
a17076b Interactive choice of label mode in graph viewer 11 January 2021, 19:37:17 UTC
5908f7b Merge pull request #240 from roopchansinghv/master Comments and white-space clean-up in "lib_realtime.py". 11 January 2021, 19:19:32 UTC
e4efc0e Merge branch 'master' of https://github.com/afni/afni 11 January 2021, 18:59:09 UTC
a357de0 lost changes 11 January 2021, 18:42:04 UTC
d936e3f install_scripts: backup to original shebangs (-S is fancy/too modern in some cases) 11 January 2021, 17:48:39 UTC
45c7027 tweak grapher to work properly in Boxed mode with Dataset#N 11 January 2021, 15:03:43 UTC
75e731c version update 11 January 2021, 01:55:14 UTC
9432032 Merge branch 'master' of https://github.com/afni/afni 10 January 2021, 19:31:42 UTC
43eefa7 tweak LiteClue again 10 January 2021, 19:31:30 UTC
8fbb183 small change in RBA 10 January 2021, 13:27:21 UTC
5dff708 small change in RBA 10 January 2021, 07:23:52 UTC
f2e8d8c tweak LiteClue to no avail 09 January 2021, 22:52:19 UTC
6155b76 ptaylor/readglob.c: fix some str comparisons in if conds 09 January 2021, 03:38:36 UTC
fe411c7 Merge pull request #243 from afni/env Env 09 January 2021, 00:05:13 UTC
6e2c617 Merge branch 'master' of https://github.com/afni/afni 08 January 2021, 23:01:34 UTC
aeee3ca patch Clue missing font problem - so it doesn't crash 08 January 2021, 23:01:23 UTC
f220c24 added deviance in 3dMSS 08 January 2021, 22:34:25 UTC
ae975b9 tcsh to env tcsh 08 January 2021, 20:03:36 UTC
d9885b8 csh to env tcsh 08 January 2021, 19:25:42 UTC
6b9c84c version update 07 January 2021, 23:35:05 UTC
0305498 startup tips: add link, fix line widths 07 January 2021, 16:08:06 UTC
22c800e spelling fix 07 January 2021, 14:03:31 UTC
81011dc small changes in 3dLMEr 07 January 2021, 01:40:35 UTC
eb5b917 small changes in TRR 07 January 2021, 01:40:26 UTC
7cf2fdf changed specifications for lme in 3dMSS 07 January 2021, 01:40:00 UTC
36cbb81 Merge branch 'master' of https://github.com/afni/afni 06 January 2021, 22:27:18 UTC
8b46a8f tweak 06 January 2021, 22:27:14 UTC
162e164 add citation in 3dLMEr 06 January 2021, 14:48:42 UTC
2d6b309 add citation in TRR 06 January 2021, 14:48:30 UTC
2f54221 Commnet and whitespace clean-up in "lib_realtime.py". 05 January 2021, 15:43:50 UTC
3761661 merge conflicts 04 January 2021, 20:25:31 UTC
14041f3 san 3dTcat 03 January 2021, 21:30:27 UTC
05ab276 san SurfMeasures 03 January 2021, 20:46:40 UTC
a92ee71 clean cluster explorer data files 03 January 2021, 07:21:33 UTC
1239e4b version update 31 December 2020, 21:39:22 UTC
32a817a AP help 31 December 2020, 17:31:25 UTC
5f99ac1 small changes in TRR 31 December 2020, 14:26:05 UTC
28161c2 nifti_tool help example 29 December 2020, 20:08:32 UTC
24ca0c2 sync 29 December 2020, 19:41:10 UTC
7603985 Merge branch 'master' of https://github.com/afni/afni 28 December 2020, 15:23:48 UTC
2a5e9d0 tiny format 28 December 2020, 15:23:46 UTC
6cd75f2 small change about labels for residuals in 3dLME 25 December 2020, 01:29:49 UTC
7472444 small change about labels for residuals in 3dLMEr 25 December 2020, 01:29:41 UTC
4801f4e Turn on option of residuals in 3dLMEr 23 December 2020, 17:28:05 UTC
343b871 version update 22 December 2020, 23:07:14 UTC
49ff082 @animal_warper: feature_size = 0.5 by default 22 December 2020, 23:05:53 UTC
7a5e259 Merge pull request #234 from leej3/bisweb add mri_mini as a mechanism for encapsulating some of afni's functionality for a web assembly build. 22 December 2020, 21:06:16 UTC
8b48110 Merge pull request #238 from afni/MRI_TYPE_maxval fixed for MRI_TYPE_maxval use 22 December 2020, 19:18:28 UTC
d4661b1 fixed for MRI_TYPE_maxval use 22 December 2020, 19:15:48 UTC
22bf448 new program TRR 22 December 2020, 18:20:17 UTC
93e1c5b 3dmaskave: MRI_TYPE_maxval bug fix (thanks, C Rorden); same for plug_maskave.c, thd_makemask.c 22 December 2020, 17:14:43 UTC
6477548 add make-based test_mri_mini target 22 December 2020, 15:44:41 UTC
54f8645 fix mri after wasm changes 22 December 2020, 15:44:41 UTC
863026f fixed debugtrace 22 December 2020, 15:44:41 UTC
ec6c036 always include rcmat.h Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
614ef3b fix wrapping Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
a93d0cb debugtrace fix Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
673e9a9 fixes for purge functions with mrilib_mini Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
8e1203c add MRILIB_MINI compile definition remove some functions that tie niml functionality to afni Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
ad068be explore minimal mrilib.h include mcw_malloc use a compile definition to remove some more advanced blurring functionality Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
9bffe3f ignore cscope files Co-authored-by: SNeuroble <stephanie.noble@yale.edu> 22 December 2020, 15:44:41 UTC
3a92000 make mini_mri_optional Co-authored-by: SNeuroble <stephanie.noble@yale.edu> Co-authored-by: RWCox <robertcox@mail.nih.gov> 22 December 2020, 15:44:41 UTC
e42ec53 add mri_mini target and improve components message improve message for installation components so that when a mismatch occurs between the make and cmake build instructions are provided to help bypass the issue. tidy management of niml and mri_mini 22 December 2020, 15:44:41 UTC
c561032 add compile definition to niml 22 December 2020, 15:44:41 UTC
b6f3da8 Merge pull request #236 from leej3/fix_homebrew_error_with_cask_option use new --cask option for homebrew for circleci 22 December 2020, 15:43:17 UTC
b91637e use new --cask option for homebrew for circleci 22 December 2020, 03:09:37 UTC
5284088 Revert "make pytest more verbose for circleci testing" This reverts commit 830b9715e703ad61bd361d80a1eb4313360080ed. 21 December 2020, 23:06:25 UTC
4e01dcc Merge branch 'master' of https://github.com/afni/afni 21 December 2020, 22:47:59 UTC
bc0f86b 3dClusterize: less printy 21 December 2020, 22:47:43 UTC
830b971 make pytest more verbose for circleci testing 21 December 2020, 22:35:03 UTC
b936471 3dClusterize: make -orient opt work. 3dROIMaker, 3dClusterize: internal read 21 December 2020, 20:40:01 UTC
c6b9c27 3dREMLfit: update links for references to modern webpage 18 December 2020, 15:02:41 UTC
26b0bd5 3dAllineate, 3dBrainsync: update links. pt, suppl: update dot_emacs 18 December 2020, 14:54:02 UTC
4a17504 more complete, do fbot, too 17 December 2020, 19:38:05 UTC
33a8649 hist 17 December 2020, 19:32:28 UTC
8403a99 Merge branch 'master' of https://github.com/afni/afni 17 December 2020, 19:23:50 UTC
73b5386 1dBport - guard against int overflow 17 December 2020, 19:23:39 UTC
4fc766c AFNI digest 17 December 2020, 16:45:22 UTC
4e4e8bf fixed the mask name bug in 3dICC 17 December 2020, 13:28:58 UTC
1f11319 3dANOVA3: update link 14 December 2020, 23:30:14 UTC
d5735f9 3dANOVA2, 3dANOVA3, 3dttest++, 3dMEMA: note gen_group_command.py in these helps 14 December 2020, 18:45:48 UTC
7386361 Merge branch 'master' of https://github.com/afni/afni 10 December 2020, 20:46:08 UTC
8cfdd6f 3dDWUncert: update help 10 December 2020, 20:45:44 UTC
22f4e8e version update 08 December 2020, 00:36:30 UTC
364ba2d Merge pull request #231 from afni/resampling Resampling 04 December 2020, 22:57:18 UTC
82cfa07 Merge branch 'master' into resampling 04 December 2020, 22:53:16 UTC
611d70a ptaylor: supplement, test script 04 December 2020, 22:39:57 UTC
76382d2 3dinfo: update help with bigger description 04 December 2020, 22:23:31 UTC
67e67e2 3dinfo: clarify+fix the refit of orient 03 December 2020, 02:36:05 UTC
82076b1 style fixup 03 December 2020, 00:29:48 UTC
9448f6e Add --runall option Combinations, created using the get_params_combinations helper function, offer a nice additional way of expanding tested parameters of a program but are not run by default (we don't have all day Daniel). These tests can be selected using the combinations marker but this ends up filtering out all unmarked tests (and still won't run combination tests that are marked with slow or veryslow). Here comes --runall to the rescue. It can be combined with file based text selection (but not marker or keyword based selection... that wouldn't make sense). 03 December 2020, 00:29:48 UTC
eb995b9 fix bug in usage of --diff-with-sample option 03 December 2020, 00:29:48 UTC
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