| 9a34279 | NatalieEO | 24 August 2020, 23:29:06 UTC | [maven-release-plugin] prepare release 1.10.0-alpha.0 | 24 August 2020, 23:29:06 UTC |
| 6be4b0b | NatalieEO | 24 August 2020, 23:08:13 UTC | update bom-internal pom (#3755) add distribution management to bom-internal pom | 24 August 2020, 23:08:13 UTC |
| d792b91 | Walter Shands | 14 August 2020, 20:27:11 UTC | support a BOM (#3724) Support a BOM that provides dependency versions | 14 August 2020, 20:27:11 UTC |
| da10f3e | Walter Shands | 14 August 2020, 16:33:23 UTC | add plugin to check signiture of plugins (#3744) | 14 August 2020, 16:33:23 UTC |
| 8c4d0bc | Andy Chen | 13 August 2020, 17:16:48 UTC | Delete non-approved organizations (#3725) Delete rejected and pending organizations dockstore/dockstore#3254 Implemented a new endpoint '/{organizationId}/' in OrganizationResource to delete a non-approved organization API call now allow users to delete their own organizations only if they are part of the organization, the organization is pending or rejected, and that their role in the organization is 'MAINTAINER' API call also allows for admins/curators to delete any rejected or pending organizations regardless whether or not the admins/curators are part of New endpoint would remove rows having a foreign key constraint before removing the organization from the database Added a orphanRemove parameter to 'users' in Organization.java in order to address and delete the organizationid FKEY instead of CASCADE as CascadeType.REMOVE or CascadeType.ALL does not always remove child entities using organizationid Implemented a new method in EventDAO.java to delete a list of events having a specific organizationId Added a new NamedQuery to Event.java to execute the SQL statement of deleting events based on a given organizationId Added a @Consumes annotation for 'createOrganization' in order to specify the content-type header as application/json so the test would pass Added a new test and stubObject for the new endpoint Included additional tests for testing the functionality of this endpoint | 13 August 2020, 17:16:48 UTC |
| dc8dfcf | Chaz Reid | 12 August 2020, 21:52:30 UTC | Improve auth realm description (#3723) | 12 August 2020, 21:52:30 UTC |
| a51b479 | NatalieEO | 11 August 2020, 00:04:34 UTC | Feature/3644/changes needed to ignore sourcefiles (#3699) * changes needed for removing sourcefile refs in UI #3699 | 11 August 2020, 00:04:34 UTC |
| 3098f25 | Gary Luu | 10 August 2020, 22:03:53 UTC | Convert all date-time strings to long (#3726) | 10 August 2020, 22:03:53 UTC |
| d8c4cbf | Gary Luu | 07 August 2020, 13:42:18 UTC | Feature/3127/swagger date-time string to long (#3716) * Update swagger * Fix test * Add swagger | 07 August 2020, 13:42:18 UTC |
| 4f80a39 | Denis Yuen | 06 August 2020, 15:30:07 UTC | Merge tag '1.9.1' into develop [maven-release-plugin] copy for tag 1.9.1 | 06 August 2020, 15:30:07 UTC |
| ef25990 | Denis Yuen | 06 August 2020, 15:06:20 UTC | [maven-release-plugin] prepare release 1.9.1 | 06 August 2020, 15:06:20 UTC |
| 61b50fa | Gary Luu | 05 August 2020, 23:24:49 UTC | Feature/seab 1164/remove orphan version metadata (#3711) * Delete orphan version_metadata * Just in case | 05 August 2020, 23:24:49 UTC |
| 92a0bbe | Denis Yuen | 05 August 2020, 14:32:03 UTC | contributing update [skip ci] (#3715) * [skip ci] | 05 August 2020, 14:32:03 UTC |
| 2ed4d15 | Andy Chen | 05 August 2020, 06:43:09 UTC | Gather remaining GitHub emails (#3706) Gather remaining GitHub emails SEAB-1532 The API method updateUserMetadata() will no longer throw an error when no GitHub or Google tokens are found to ensure that the metadata is updated for users with tokens Included a new updateUserMetadata() signature that is only affiliated with the endpoint /users/updateUserMetadata Included a boolean parameter to the main updateUserMetadata() method to toggle the option to throw an error when no GitHub or Google tokens are found Added a try catch block in the main updateUserMetadata() block to catch any exceptions and throw them if the boolean value is toggled Refactored existing calls to updateUserMetadata() to include a boolean parameter Included two new tests for the endpoint /users/updateUserMetadata | 05 August 2020, 06:43:09 UTC |
| 4055af7 | NatalieEO | 04 August 2020, 21:17:17 UTC | Don't hide default versions and vice versa (#3708) * Don't hide default versions and vice versa | 04 August 2020, 21:17:17 UTC |
| 9bc84b5 | Gregory F J Hogue | 31 July 2020, 22:40:46 UTC | TRS tools endpoint - exclude null values for provided parameters (#3707) * TRS tools endpoint - exclude null values for provided parameters * add relevant assertions to tool list test (last one used to fail) | 31 July 2020, 22:40:46 UTC |
| 1ef100e | Gary Luu | 31 July 2020, 15:01:02 UTC | Feature/2834/record parsing info (#3692) * Add new elementcollection * Add warning message * Parse descriptors for type of imports * Actually return the ParsedInformation * Update swagger/openapi | 31 July 2020, 15:01:02 UTC |
| bde477e | Andy Chen | 30 July 2020, 23:45:40 UTC | Feature/3574/update admin curator status (#3693) Enable easy access to updating admin/curator status dockstore/dockstore#3574 Created a new API call at a new endpoint for users with admin/curator status to update the privileges of other users Included @Consumes to API call since request content type is set to '*/*' by default, causing a 415 error. Included PrivilegeRequest.java to the webservice api objects which encapsulates the request to set admin/curator privileges to a user Repositioned logic to check if authuser is the user, and deny access to modifying own privileges Included fail assertions to try catch blocks to ensure that the try will fail if the catch isn't reached Included an additional test to ensure that a non privileged user cannot access the API call Removed Swagger annotations from setUserPrivilege() and replaced them with OAS annotations, with the exception of @ApiOperation Modified tests to rely on OAS rather than to rely on Swagger dependencies | 30 July 2020, 23:45:40 UTC |
| 4812671 | Gregory F J Hogue | 30 July 2020, 18:02:45 UTC | use getters for Tag compareTo() (#3702) * use getters for Tag compareTo() * make name, reference, & lastBuilt private to be safe | 30 July 2020, 18:02:45 UTC |
| 13ebc91 | Denis Yuen | 30 July 2020, 14:46:58 UTC | Remove refresh tool by namespace (#3580) | 30 July 2020, 14:46:58 UTC |
| 1c23e99 | Charles Overbeck | 29 July 2020, 22:57:55 UTC | Set batch size for associations (#3668) (#3700) * Set batch size for associations #2125 Instead of fetching each association row one-by-one, fetches them in batches. For example, if a entry has 10 versions, the 10 versions will be fetched in one SQL statement when batch size is >= 10. If batch size is not set, the 10 versions are fetched with 10 SQL statements. A lot more details on PR. | 29 July 2020, 22:57:55 UTC |
| e3a9d56 | Charles Overbeck | 29 July 2020, 15:59:05 UTC | Renable GitLab tests (#3697) * Restore commented out GitLab tests #3313 | 29 July 2020, 15:59:05 UTC |
| 65d1d98 | Andrew Duncan | 28 July 2020, 17:53:57 UTC | 3687/lambda error message fix (#3696) * print out error message to lambda event for customwebapplicationexceptions * change to one liner | 28 July 2020, 17:53:57 UTC |
| e8ea44b | Denis Yuen | 24 July 2020, 20:39:45 UTC | Hopefully less openapi.yaml changes | 28 July 2020, 14:54:28 UTC |
| 7d75576 | Denis Yuen | 22 July 2020, 21:37:42 UTC | Working example for cofest | 28 July 2020, 14:54:28 UTC |
| ba23a29 | Gary Luu | 24 July 2020, 14:45:50 UTC | Support Develop TRS (#3671) * Use another branch of TRS where Galaxy is GALAXY * Make use of new descriptor name * Update openapi * Use tagged version | 28 July 2020, 14:54:28 UTC |
| 840ff14 | Denis Yuen | 27 July 2020, 14:23:32 UTC | Wipe out unstar for #3657 (#3688) * Working on #3657 * Fix failing tests. Not clear why it wasn't working before, but this seems to work. Co-authored-by: Charles Overbeck <coverbec@ucsc.edu> | 27 July 2020, 14:23:32 UTC |
| 41ddaf3 | Charles Overbeck | 24 July 2020, 22:51:56 UTC | Support GALAXY subclass in .dockstore.yml (#3690) * Support GALAXY subclass in .dockstore.yml #3686 Continue to support GXFORMAT2 for backwards-compatiblity, and continue to expose GXFORMAT2 in the object for code that already relies on that. There is probably a more elegant solution with snakeyaml, but it wasn't immediately obvious, and this should work. | 24 July 2020, 22:51:56 UTC |
| 560e774 | Gary Luu | 24 July 2020, 14:45:50 UTC | Support Develop TRS (#3671) * Use another branch of TRS where Galaxy is GALAXY * Make use of new descriptor name * Update openapi * Use tagged version | 24 July 2020, 14:45:50 UTC |
| c4576a1 | Andy Chen | 17 July 2020, 21:19:24 UTC | Feature/seab 1401/collect emails (#3667) Collect User Emails From GitHub SEAB#1401 Implemented a getEmail() method that utilizes the getEmails2() method which does an API call to 'user/emails' and returns a list of emails regardless if the user set their email display to private or public. getEmail() then traverses through the list and returns the primary email address. Created an integration test to verify that the fields of object Profile is correct after updating the logged in user's metadata Included a new fixture 'GitHubEmail.json' for Hoverfly Implemented a new case for Hoverfly to check for the new endpoint '/user/emails' | 17 July 2020, 21:19:24 UTC |
| f4fa9eb | Charles Overbeck | 17 July 2020, 15:57:37 UTC | Set batch size for associations (#3668) * Set batch size for associations #2125 Instead of fetching each association row one-by-one, fetches them in batches. For example, if a entry has 10 versions, the 10 versions will be fetched in one SQL statement when batch size is >= 10. If batch size is not set, the 10 versions are fetched with 10 SQL statements. A lot more details on PR. | 17 July 2020, 15:57:37 UTC |
| d1cdcfd | Gary Luu | 15 July 2020, 21:53:16 UTC | Feature/open api generator update1 (#3633) * Fix some timestamps * Fix test * Update swagger/openapi * Convert to int64 * Fix test * Add failing validator * Update yq | 15 July 2020, 21:53:16 UTC |
| 22a244a | NatalieEO | 13 July 2020, 21:44:30 UTC | 3632 add descriptor type column (#3651) * descriptor type column #3651 | 13 July 2020, 21:44:30 UTC |
| e41902f | Gary Luu | 10 July 2020, 20:59:37 UTC | PullRobot reference in wrong place, add more tests (#3655) | 10 July 2020, 20:59:37 UTC |
| 357fbba | Gregory F J Hogue | 09 July 2020, 21:02:30 UTC | GA4GH APIs set readOnly transaction attribute (#3582) (#3653) * GA4GH APIs set readOnly transaction attribute (#3582) * set readOnly transaction attribute (openapi) | 09 July 2020, 21:02:30 UTC |
| 3469e99 | Gary Luu | 09 July 2020, 18:58:11 UTC | Remove lower case name (#3555) * Remove lower case name | 09 July 2020, 18:58:11 UTC |
| 610ba9a | Gregory F J Hogue | 09 July 2020, 15:37:33 UTC | delete user's services in UserResource.deleteSelfFromEntries() (#3291) (#3630) * delete user's services in UserResource.deleteSelfFromEntries() (#3291) * test if user's services are deleted on selfDestruct(); revert previous * review revisions - user self destruct & test * use HttpStatus constant * use assertEquals() | 09 July 2020, 15:37:33 UTC |
| 2e6d8f0 | Andy Chen | 08 July 2020, 23:00:21 UTC | Improved logging in web service (#3627) dockstore/dockstore#3384 Exceptions themselves are now all logged alongside with the messages Moved the levels of logging for GitHubSourceCodeRepo.java Line 183 and CWLHandler.java Line 427 from ERROR to WARN as they are noisy | 08 July 2020, 23:00:21 UTC |
| 5c7fb22 | Andrew Duncan | 08 July 2020, 15:33:47 UTC | Feature/3088/checker workflow stub (#3647) * checker workflow cannot be stubbed * remove test for deleting checker https://github.com/dockstore/dockstore/issues/3088 | 08 July 2020, 15:33:47 UTC |
| f617f49 | Gary Luu | 08 July 2020, 14:40:16 UTC | Fix/3619/add user to dockstore workflows performance (#3646) * Use existing optimized query * Only grab workflows without the user | 08 July 2020, 14:40:16 UTC |
| f57c90b | Denis Yuen | 06 July 2020, 20:20:08 UTC | Feature/dropwizard major update (#3643) Major update to keep up to date with a pile of dependencies * extra notes at https://www.dropwizard.io/en/latest/manual/upgrade-notes/upgrade-notes-2_0_x.html * note that many javax packages are now part of jakarta to avoid extra shading warnings https://github.com/dropwizard/dropwizard/pull/3069 * also seems to be a bit more strict with a required sequence for notifications oddly | 06 July 2020, 20:20:08 UTC |
| fa6557f | NatalieEO | 02 July 2020, 18:59:54 UTC | Feature/3455/progress towards lazy sourcefiles (#3631) * progress towards lazy sourcefiles | 02 July 2020, 18:59:54 UTC |
| b57a2e0 | Denis Yuen | 01 July 2020, 00:49:51 UTC | [skip travis] update yq (#3629) * [skip travis] update yq | 01 July 2020, 00:49:51 UTC |
| 67a1a6e | Denis Yuen | 30 June 2020, 17:27:20 UTC | Security updates for dropwizard (#3624) * Security updates for dropwizard | 30 June 2020, 17:27:20 UTC |
| 1c481c3 | Charles Overbeck | 30 June 2020, 16:02:29 UTC | Fix bad merge to master (#3625) LGTM check failing because it can't build the previous commit, which this PR fixes. | 30 June 2020, 16:02:29 UTC |
| e47edeb | Denis Yuen | 29 June 2020, 20:51:11 UTC | Iterate version numbers | 29 June 2020, 20:51:11 UTC |
| 5ec8013 | Charles Overbeck | 29 June 2020, 20:40:55 UTC | Merge tag '1.9.0' into develop [maven-release-plugin] copy for tag 1.9.0 | 29 June 2020, 20:40:55 UTC |
| 8222408 | Charles Overbeck | 29 June 2020, 20:40:17 UTC | Merge branch 'release/1.9.0' | 29 June 2020, 20:40:17 UTC |
| e5508d0 | Charles Overbeck | 29 June 2020, 20:18:03 UTC | [maven-release-plugin] prepare for next development iteration | 29 June 2020, 20:18:03 UTC |
| fba46c9 | Charles Overbeck | 29 June 2020, 20:17:54 UTC | [maven-release-plugin] prepare release 1.9.0 | 29 June 2020, 20:17:54 UTC |
| 9cb47b4 | Charles Overbeck | 29 June 2020, 20:03:02 UTC | Fix discover workflows (#3621) #3486 findMyEntries is returning both workflows and services, so filter on BioWorkflows. Debated about whether to deeper changes for this, but instead created a followup issue, #3619. I don't know why Swagger/OpenAPI/third-party is so out of sync Seems coveralls if flaky and we need this for release, so merging | 29 June 2020, 20:03:02 UTC |
| 6fe6db9 | Denis Yuen | 24 June 2020, 18:41:30 UTC | [maven-release-plugin] prepare for next development iteration | 24 June 2020, 18:41:30 UTC |
| 15f8f68 | Denis Yuen | 24 June 2020, 18:41:23 UTC | [maven-release-plugin] prepare release 1.9.0-beta.2 | 24 June 2020, 18:41:23 UTC |
| 29cc8c4 | Andrew Duncan | 24 June 2020, 17:45:17 UTC | Feature/3035/requirements map error (#3587) * support for cwl requirements and hints as maps * added test for requirements https://github.com/dockstore/dockstore/issues/3035 | 24 June 2020, 17:45:17 UTC |
| fb13a51 | Emily Soth | 24 June 2020, 17:03:00 UTC | added timeout to executeCommand utilities (#3548) added timeout to executeCommand utilities | 24 June 2020, 17:03:00 UTC |
| 5ae940e | Gary Luu | 24 June 2020, 16:22:39 UTC | Feature/3540/quay swagger pull robot field (#3602) * Update pull_robot swagger | 24 June 2020, 16:22:39 UTC |
| 2caf914 | Gregory F J Hogue | 24 June 2020, 16:00:54 UTC | Exit sortOpenAPIYaml.sh with more useful message when yq missing (#3561) (#3601) | 24 June 2020, 16:00:54 UTC |
| d09222d | Gary Luu | 23 June 2020, 18:12:13 UTC | Update pull_robot swagger (#3584) * Update pull_robot swagger | 23 June 2020, 18:12:13 UTC |
| 9ac55b9 | Denis Yuen | 22 June 2020, 21:50:06 UTC | Disable known CLI breakage (#3597) | 22 June 2020, 21:50:06 UTC |
| 2559d6b | Denis Yuen | 22 June 2020, 17:42:59 UTC | fix npe plus test (#3581) * fix plus test * Fix for npe | 22 June 2020, 17:42:59 UTC |
| 08ff191 | Denis Yuen | 18 June 2020, 15:30:53 UTC | [maven-release-plugin] prepare for next development iteration | 18 June 2020, 15:30:53 UTC |
| 06d2100 | Denis Yuen | 18 June 2020, 15:30:45 UTC | [maven-release-plugin] prepare release 1.9.0-beta.1 | 18 June 2020, 15:30:45 UTC |
| 403aa9c | Gary Luu | 18 June 2020, 15:18:15 UTC | Feature/3551/fix default version migration (#3554) | 18 June 2020, 15:18:15 UTC |
| 5a5ce29 | Andrew Duncan | 17 June 2020, 14:36:17 UTC | Feature/3097/duplicate token registration (#3566) * properly catch error where a 3rd party account has already been connected https://github.com/dockstore/dockstore/issues/3097 | 17 June 2020, 14:36:17 UTC |
| cbedbd9 | Andrew Duncan | 16 June 2020, 20:18:05 UTC | Feature/3572/catch http import exceptions (#3573) * prevent check for http recursive imports from throwing exception that kills refresh https://github.com/dockstore/dockstore/issues/3572 | 16 June 2020, 20:18:05 UTC |
| 01e6ba1 | Andrew Duncan | 16 June 2020, 15:39:00 UTC | Feature/3412/dockstoreyml metadata capture (#3567) * keep track of dockstore yml metadata * automatic code fix https://github.com/dockstore/dockstore/issues/3412 | 16 June 2020, 15:39:00 UTC |
| 464a35e | Andrew Duncan | 12 June 2020, 15:24:22 UTC | Feature/log readfile error log path (#3556) * include file name in log for io exception from readfile * improve the error message for the readFile call * some more improvements to logging * a few more logging updates * throw exception when cannot reach the repository on github * print exception as well | 12 June 2020, 15:24:22 UTC |
| 26e7001 | NatalieEO | 11 June 2020, 23:30:24 UTC | feature/3406/add openapi lock to endpoint (#3547) * missing endpoint | 11 June 2020, 23:30:24 UTC |
| 39bc462 | Denis Yuen | 11 June 2020, 20:34:31 UTC | Feature/remove refreshorg (#3538) * tests now mostly use a combination of listing repos by organization membership and manual register to simulate what we used to do with refresh by org | 11 June 2020, 20:34:31 UTC |
| d6e10d2 | Charles Overbeck | 11 June 2020, 16:09:11 UTC | Don't allow curators and admins to login with Google (#3545) * Don't allow curators and admins to login with Google SEAB-1346 We enforce MFA for the dockstore GitHub org, and only make dockstore GitHub members eligible for being admins and curators. Not aware of a way to enforce MFA for a Google account, so disable logging in with Google if you are an admin or curator. | 11 June 2020, 16:09:11 UTC |
| c12b916 | Denis Yuen | 10 June 2020, 15:07:28 UTC | Add additional tool deletion case (#3543) | 10 June 2020, 15:07:28 UTC |
| 653c2de | Andrew Duncan | 09 June 2020, 15:57:46 UTC | Release/1.9.0 beta.0 (#3537) * [maven-release-plugin] prepare release 1.9.0-beta.0 * [maven-release-plugin] prepare for next development iteration * update swagger and openapi | 09 June 2020, 15:57:46 UTC |
| 0149fc2 | Denis Yuen | 08 June 2020, 23:11:13 UTC | switch to https://schema.org/version/latest/schema.rdf (#3526) Co-authored-by: Michael R. Crusoe <michael.crusoe@gmail.com> | 08 June 2020, 23:11:13 UTC |
| 5bea225 | Gary Luu | 08 June 2020, 17:19:28 UTC | Feature/fix tool date (#3535) * Fix tool date * Revert "fix hosted tool delete error (#3533)" This reverts commit 9514cd90bded8ab78c3dc4c24350a6ace715687c. * Use Apache instead instead of plain Java | 08 June 2020, 17:19:28 UTC |
| 9514cd9 | Andrew Duncan | 08 June 2020, 13:57:19 UTC | fix hosted tool delete error (#3533) * use dbcreatetime for finding most recent version | 08 June 2020, 13:57:19 UTC |
| 83af273 | Andrew Duncan | 05 June 2020, 19:42:25 UTC | Release/1.9.0 alpha.10 (#3532) * [maven-release-plugin] prepare release 1.9.0-alpha.10 * [maven-release-plugin] prepare for next development iteration * update swagger and openapi | 05 June 2020, 19:42:25 UTC |
| b78abb8 | Andrew Duncan | 05 June 2020, 17:14:14 UTC | lambda event organization column and date (#3529) * return date in json object; also split repository into organization and repository * fix migration | 05 June 2020, 17:14:14 UTC |
| 5c0b5d5 | NatalieEO | 04 June 2020, 18:21:20 UTC | put lock on applicable openapi endpoints (#3512) * put lock on applicable openapi endpoints #3406 | 04 June 2020, 18:21:20 UTC |
| 45959c0 | Denis Yuen | 03 June 2020, 18:42:37 UTC | Extra message for invalid repo (#3520) * Extra message for invalid repo * PR feedback | 03 June 2020, 18:42:37 UTC |
| 47be4cc | Charles Overbeck | 03 June 2020, 16:20:56 UTC | Allow only one service in .dockstore.yml (#3515) * Allow only one service in .dockstore.yml #3460 Instead of array of services, only allow one. See issue for details. | 03 June 2020, 16:20:56 UTC |
| 22cf052 | Chaz Reid | 02 June 2020, 23:30:30 UTC | Fix typo in printed message in DockstoreYamlHelper (#3513) | 02 June 2020, 23:30:30 UTC |
| 3d73785 | Denis Yuen | 02 June 2020, 19:22:27 UTC | Merge 1.8.6 hotfix take3 (#3506) | 02 June 2020, 19:22:27 UTC |
| 15f3e6c | Andrew Duncan | 02 June 2020, 17:31:06 UTC | Release/1.9.0 alpha.9 (#3511) * [maven-release-plugin] prepare release 1.9.0-alpha.9 * [maven-release-plugin] prepare for next development iteration | 02 June 2020, 17:31:06 UTC |
| 5e0deaa | Andrew Duncan | 01 June 2020, 13:47:38 UTC | Feature/1360/test params not required (#3507) * test param file not required * add test for empty test param file https://github.com/dockstore/dockstore/issues/3466 | 01 June 2020, 13:47:38 UTC |
| 30b8f38 | Andrew Duncan | 29 May 2020, 20:00:17 UTC | Feature/3486/endpoint add user to workflows (#3491) * add endpoint for adding user to all workflows they should have access to https://github.com/dockstore/dockstore/issues/3486 | 29 May 2020, 20:00:17 UTC |
| 53013f9 | Gary Luu | 29 May 2020, 17:43:53 UTC | Feature/3449/set default version during refresh (#3498) * Add another test | 29 May 2020, 17:43:53 UTC |
| cb794a5 | Andrew Duncan | 29 May 2020, 15:34:07 UTC | Feature/3238/lambda error messages (#3479) * Store lambda events and make them accessible via API https://github.com/dockstore/dockstore/issues/3238 | 29 May 2020, 15:34:07 UTC |
| 2df76fe | NatalieEO | 28 May 2020, 19:23:27 UTC | Sourcefiles endpoint (#3482) sourcefiles endpoint | 28 May 2020, 19:23:27 UTC |
| b025432 | Denis Yuen | 28 May 2020, 15:41:49 UTC | Merge branch 'hotfix/1.8.6' | 28 May 2020, 15:41:49 UTC |
| 4f32ff5 | Denis Yuen | 28 May 2020, 15:25:01 UTC | [maven-release-plugin] prepare for next development iteration | 28 May 2020, 15:25:01 UTC |
| 6632e5b | Denis Yuen | 28 May 2020, 15:24:54 UTC | [maven-release-plugin] prepare release 1.8.6 | 28 May 2020, 15:24:54 UTC |
| c2d5de0 | Gary Luu | 27 May 2020, 17:30:25 UTC | Fix/keep old models (#3496) * Make compatible with CLI * Convert back to Workflow * Revert MyWorkflow swagger | 27 May 2020, 17:30:25 UTC |
| 6ca5b26 | Gary Luu | 27 May 2020, 17:29:45 UTC | Fix/store jar on circle ci (#3497) * Store artifacts * change order of migrations in migrations.xml (#3375) Co-authored-by: Andrew Duncan <andrew.duncan@oicr.on.ca> | 27 May 2020, 17:29:45 UTC |
| f9a9a1c | Denis Yuen | 25 May 2020, 18:41:57 UTC | Fix tool delete when events are present (#3494) | 25 May 2020, 18:41:57 UTC |
| 02a765d | dependabot[bot] | 25 May 2020, 18:41:28 UTC | Bump commons-configuration2 from 2.2 to 2.7 (#3492) * Bump commons-configuration2 from 2.2 to 2.7 Bumps commons-configuration2 from 2.2 to 2.7. Signed-off-by: dependabot[bot] <support@github.com> * Update managed commons-text (might affect Cromwell) Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Denis Yuen <denis.yuen@oicr.on.ca> | 25 May 2020, 18:41:28 UTC |
| e9a98e6 | Andrew Duncan | 20 May 2020, 15:12:40 UTC | Feature/fix discourse api (#3471) * https://ucsc-cgl.atlassian.net/browse/SEAB-1135 * better error message for discourse * update discourse swagger | 20 May 2020, 15:12:40 UTC |
| d22cc74 | Gary Luu | 20 May 2020, 00:33:12 UTC | Fix/logged out collection entries (#3481) * Fix logged out entries * Prevent from ever happening again | 20 May 2020, 00:33:12 UTC |
| d4a7b6e | Gary Luu | 19 May 2020, 21:27:37 UTC | Lazy load event entities (#3478) | 19 May 2020, 21:27:37 UTC |
| b86ec62 | Gary Luu | 19 May 2020, 18:57:19 UTC | Feature/fixTravisPostgres (#3480) * Test * I believe! | 19 May 2020, 18:57:19 UTC |
| e1277af | Gary Luu | 15 May 2020, 19:08:59 UTC | Fix/seab 1132/collection entries (#3467) * Custom type for collection entries * Database optimization * Update openapi/swagger again | 15 May 2020, 19:08:59 UTC |
