| 28bc8b3 | Kathy Tran | 22 June 2023, 14:04:16 UTC | Update artifacts | 22 June 2023, 14:04:16 UTC |
| a4476ee | Kathy Tran | 22 June 2023, 13:20:50 UTC | Move things that dockstore-support uses to dockstore-common (#5562) https://github.com/dockstore/dockstore/issues/5528 https://ucsc-cgl.atlassian.net/browse/DOCK-2404 * Move MetricsData to dockstore-common * Move S3ClientHelper to dockstore-common * Move format checkers to dockstore-common * Move Partner enum to dockstore-common * Move MetricsDataS3Client to dockstore-common * Move test | 22 June 2023, 13:20:50 UTC |
| b2d821f | Denis Yuen | 21 June 2023, 19:12:37 UTC | cwlavro update (#5564) | 21 June 2023, 19:12:37 UTC |
| 34756ab | Denis Yuen | 21 June 2023, 18:51:56 UTC | remove obsolete column (#5569) * test this * PR feedback | 21 June 2023, 18:51:56 UTC |
| 9ba5a9c | Denis Yuen | 20 June 2023, 17:56:10 UTC | Switch jackson annotations and add tests (#5563) * Switch jackson annotations and add tests * move filters out to their filtered classes | 20 June 2023, 17:56:10 UTC |
| 3af445b | Denis Yuen | 19 June 2023, 15:17:08 UTC | Update zenodo client (#5555) * Update * add basic live test * clean-up * work IDE had different import order | 19 June 2023, 15:17:08 UTC |
| 504701d | David Steinberg | 16 June 2023, 16:48:34 UTC | Only apply CORS headers to TRS endpoints (#5544) * Add tests for desired CORS setup * Selectively apply CORS headers * Make list private for sonarcloud * Switch to JUnit assertions for codacy * Change assertion signature for sonarcloud * Order should be expected, actual * Remove x-auth-pw and username, add Accept-Encoding via @coverbeck * Only add CORS headers to non-extended GA4GHv2 via @denis-yuen * Add HEAD to allowed CORS methods via @coverbeck and @svonworl * Add methods variable | 16 June 2023, 16:48:34 UTC |
| 6043ff5 | Charles Overbeck | 15 June 2023, 16:21:54 UTC | Fix slow endpoints with checker workflows (#5546) Make association between checker workflow and checked entry lazy. Make the relationship between checker workflow and checked entry one-to-one again. More details in PR. SEAB-5552 | 15 June 2023, 16:21:54 UTC |
| 234084f | Nayeon Hyun | 14 June 2023, 14:51:02 UTC | DOCK-2397: Redirect 500 error for invalid filters to a 400 (#5543) * redirected 500 to 400 * pr review feedback changes and new test * added tool test * checkstyle error * checkstyle error * pr review feedback * renamed error message * fixed error checkig * checkstyle * checkstyle * code smell fix * review feedback changes * review feedback changes | 14 June 2023, 14:51:02 UTC |
| e5b0554 | Denis Yuen | 13 June 2023, 17:09:06 UTC | Feature/refactor project (#5547) * instanceof pattern variables * simplify some stream operations | 13 June 2023, 17:09:06 UTC |
| afa15d2 | Denis Yuen | 06 June 2023, 21:58:42 UTC | test out potentially temporary fix for es indexing issue (#5536) * test out potentially temporary fix * add back backwards compatibility with text plain response * pr feedback, might be more backwards compatible | 06 June 2023, 21:58:42 UTC |
| ad4cee0 | Charles Overbeck | 02 June 2023, 16:14:38 UTC | Add getPublishedContainer to OpenAPI (#5539) #5338 Discovered this endpoint isn't there in trying to address #5538 on the UI side. | 02 June 2023, 16:14:38 UTC |
| 868152f | Nayeon Hyun | 02 June 2023, 16:02:17 UTC | SEAB-5387: get notebook counts in collections and add Service support in collections (#5519) * added notebook count in collections * added test * little edit to support 1.15 changes * sonarcloud code smell * merge * checkstyle * test fix * sonarcloud * sonarcloud * Services in collections * oops fixed typo * Update CollectionHelper.java * changes * changes * add javadoc * swagger change rollback | 02 June 2023, 16:02:17 UTC |
| ae1cb3b | Steve Von Worley | 01 June 2023, 16:23:20 UTC | dump and reuse migrated databases during integrations tests https://ucsc-cgl.atlassian.net/browse/SEAB-5548 | 01 June 2023, 16:23:20 UTC |
| e158f79 | Ying Yang | 31 May 2023, 16:02:04 UTC | DOCK-2374: Switch to new codecov uploader (#5532) * use new uploader * integrity check for codecov uploader * setup uploader | 31 May 2023, 16:02:04 UTC |
| 80da173 | Denis Yuen | 30 May 2023, 17:25:23 UTC | what if new dependency cache (#5530) * what if new dependency cache * Update README.md | 30 May 2023, 17:25:23 UTC |
| 9897d1e | Kathy Tran | 24 May 2023, 19:37:32 UTC | Fix failing metrics test from 1.14 merge (#5529) * Add JsonProperty annotation to setter * Remove unused function | 24 May 2023, 19:37:32 UTC |
| df2ee7b | Steve Von Worley | 24 May 2023, 17:12:39 UTC | change test notebook migration ids so they will never collide https://ucsc-cgl.atlassian.net/browse/SEAB-5530 | 24 May 2023, 17:12:39 UTC |
| 891695a | Denis Yuen | 24 May 2023, 15:18:44 UTC | Merge tag '1.14' into develop 1.14 | 24 May 2023, 15:18:44 UTC |
| 58dc8e2 | Denis Yuen | 24 May 2023, 14:54:47 UTC | Merge branch 'release/1.14' | 24 May 2023, 14:54:47 UTC |
| 3d7ca0f | Denis Yuen | 23 May 2023, 20:37:37 UTC | Reset version | 23 May 2023, 20:37:37 UTC |
| 26d26df | Denis Yuen | 23 May 2023, 20:34:42 UTC | Update artifacts | 23 May 2023, 20:34:42 UTC |
| bff1a2e | Nayeon Hyun | 19 May 2023, 16:19:25 UTC | added Notebook to getUserEntries endpoint (#5522) | 19 May 2023, 16:19:25 UTC |
| f7d3628 | Kathy Tran | 17 May 2023, 19:48:11 UTC | Reset version | 17 May 2023, 19:48:11 UTC |
| e0cc4cf | Kathy Tran | 17 May 2023, 19:33:12 UTC | Update artifacts | 17 May 2023, 19:33:12 UTC |
| 349954c | Denis Yuen | 17 May 2023, 14:17:46 UTC | update constraint (#5521) * update * consistency | 17 May 2023, 14:17:46 UTC |
| fc7bfc6 | Kathy Tran | 17 May 2023, 13:07:54 UTC | Test 1.13 CLI with 1.14 webservice (#5518) https://ucsc-cgl.atlassian.net/browse/SEAB-5039 * Set CLI version to 1.13.0 for regression tests * Update requirements file version | 17 May 2023, 13:07:54 UTC |
| 2ce5bc0 | Denis Yuen | 16 May 2023, 18:37:07 UTC | remove event consumer (#5511) * is this confusing snyk? * think this can just be removed | 16 May 2023, 18:37:07 UTC |
| 62f2570 | Steve Von Worley | 16 May 2023, 16:53:44 UTC | add configurable urls for colab and mybinder notebook launch https://ucsc-cgl.atlassian.net/browse/SEAB-5121 | 16 May 2023, 16:53:44 UTC |
| 6310945 | Kathy Tran | 15 May 2023, 12:51:33 UTC | Hardcode region for ToolTester S3Client to us-east-1 (#5514) https://ucsc-cgl.atlassian.net/browse/DOCK-1859 https://github.com/dockstore/dockstore/issues/4359 * Hardcode region for ToolTester S3Client | 15 May 2023, 12:51:33 UTC |
| 222a47f | Charles Overbeck | 13 May 2023, 00:32:33 UTC | Add ORCID when publishing to Zenodo (#5506) #5437 | 13 May 2023, 00:32:33 UTC |
| 70a3f74 | Denis Yuen | 12 May 2023, 19:26:14 UTC | Dropwizard update 4.0 (#5483) * iterate version for 1.15 * punch it to 3.0.0 * httpclient 5 migration for dropwizard code * what if we skip workspace persist https://github.com/dockstore/dockstore/issues/5458 * subtle breaking change in jackson 2.14 * ugh, going to have to update the other generated apis like bitbucket next stop swagger-java-sam-client openapi-java-client swagger-java-quay-client! swagger-java-discourse-client discourse * codacy and sonarcloud wave 1 * more codacy * lockdown banned dependencies, reduce transitive | 12 May 2023, 19:26:14 UTC |
| 92cabd1 | Denis Yuen | 12 May 2023, 19:23:40 UTC | deal with expired docker image (#5512) * test this seemingly unrelated ci issue * does this need to change? * more references to old repo | 12 May 2023, 19:23:40 UTC |
| fab3675 | Denis Yuen | 11 May 2023, 21:56:17 UTC | is this confusing snyk? | 12 May 2023, 14:14:03 UTC |
| 19c683f | Steve Von Worley | 11 May 2023, 22:07:48 UTC | support old Jupyter notebooks with nbformat < 4 https://ucsc-cgl.atlassian.net/browse/SEAB-5438 | 11 May 2023, 22:07:48 UTC |
| 82c703a | Steve Von Worley | 11 May 2023, 22:05:14 UTC | calculate Version validity later https://ucsc-cgl.atlassian.net/browse/DOCK-2004 #4599 | 11 May 2023, 22:05:14 UTC |
| b770ed5 | Kathy Tran | 09 May 2023, 20:33:56 UTC | Set default descriptor type for tools (#5498) https://ucsc-cgl.atlassian.net/browse/SEAB-5006 * Disallow publishing hosted tools with no valid versions; calculate descriptor type for auto tools * Set default descriptor type for tools to CWL * Simplify calculateDescriptorType function | 09 May 2023, 20:33:56 UTC |
| c8f3383 | Charles Overbeck | 09 May 2023, 16:31:36 UTC | Tweak API message for hosted entries (#5500) #5489 | 09 May 2023, 16:31:36 UTC |
| 8515ea2 | Steve Von Worley | 09 May 2023, 15:48:59 UTC | implement notebook snapshotting https://ucsc-cgl.atlassian.net/browse/SEAB-5113 | 09 May 2023, 15:48:59 UTC |
| 9dcc9d3 | Charles Overbeck | 05 May 2023, 23:17:30 UTC | Handle StackOverflowError that Cromwell throws (#5497) #5496 I don't think we allow recursive WDL workflows to get into the DB anymore, see #5291, but there are existing ones, alas. | 05 May 2023, 23:17:30 UTC |
| 3edbf72 | Denis Yuen | 02 May 2023, 20:30:47 UTC | Reset version | 02 May 2023, 20:30:47 UTC |
| 59de008 | Denis Yuen | 02 May 2023, 20:23:50 UTC | Update artifacts | 02 May 2023, 20:23:50 UTC |
| 9ecc21b | Charles Overbeck | 02 May 2023, 20:20:43 UTC | Remove trailing slash from the lambda url (#5490) SEAB-5416 | 02 May 2023, 20:20:43 UTC |
| 33cd4fc | Kathy Tran | 02 May 2023, 20:12:00 UTC | Allow platforms to submit aggregated metrics; aggregate metrics across all platforms (#5486) https://ucsc-cgl.atlassian.net/browse/SEAB-5319 https://ucsc-cgl.atlassian.net/browse/SEAB-5305 | 02 May 2023, 20:12:00 UTC |
| 51091da | Nayeon Hyun | 02 May 2023, 19:40:24 UTC | DOCK-2367: hide category events from regular users (#5478) * edited event api to hide categories from regular users * fixed openapi * openapi yaml fix * fixed function * fixed function * changes after pr review * checkstyle error * added filter for unpublished workflows * added filter for unpublished workflows * added filter for unpublished workflows * removed function * simplified code * typo fix | 02 May 2023, 19:40:24 UTC |
| cea1e40 | Charles Overbeck | 29 April 2023, 00:38:38 UTC | One-time endpoint for OpenData Check (#5473) SEAB-5364 | 29 April 2023, 00:38:38 UTC |
| f8c35fc | Charles Overbeck | 27 April 2023, 20:24:32 UTC | Convert s3 and gs URIs to https URLs (#5487) #5387 | 27 April 2023, 20:24:32 UTC |
| 0a146cf | Denis Yuen | 27 April 2023, 19:32:06 UTC | Merge branch 'release/1.14' into develop | 27 April 2023, 19:32:06 UTC |
| a6aca54 | Denis Yuen | 27 April 2023, 15:31:35 UTC | add joda time to classpath (#5488) | 27 April 2023, 15:31:35 UTC |
| 8e85fb7 | Denis Yuen | 26 April 2023, 21:13:48 UTC | Feature/dropwizard update (#5477) * iterate version for 1.15 * punch it to 3.0.0 * httpclient 5 migration for dropwizard code * fixture fix * joda time for tests * what if we skip workspace persist https://github.com/dockstore/dockstore/issues/5458 * subtle breaking change in jackson 2.14 | 26 April 2023, 21:13:48 UTC |
| 5e3e0ff | Kathy Tran | 20 April 2023, 19:14:38 UTC | Fix description update for existing workflow version (#5470) #5456 https://ucsc-cgl.atlassian.net/browse/DOCK-2370 | 20 April 2023, 19:14:38 UTC |
| 3827ddd | Kathy Tran | 26 January 2023, 14:18:21 UTC | Fix SAM google token access error for GA4GH endpoints (#5325) https://ucsc-cgl.atlassian.net/browse/SEAB-5167 | 20 April 2023, 15:45:54 UTC |
| 30c3533 | Kathy Tran | 19 April 2023, 18:14:11 UTC | Add multiple authors to Entry and fix authors in search (#5461) https://ucsc-cgl.atlassian.net/browse/SEAB-3629 | 19 April 2023, 18:14:11 UTC |
| 8aa1e0e | Denis Yuen | 18 April 2023, 20:51:27 UTC | null check and add test for cwl location (#5468) * null check and add test * throw in some garbage * simplify | 18 April 2023, 20:51:27 UTC |
| f752ce7 | dependabot[bot] | 14 April 2023, 21:11:51 UTC | Bump json from 20220924 to 20230227 in /bom-internal (#5465) * Bump json from 20220924 to 20230227 in /bom-internal Bumps [json](https://github.com/douglascrockford/JSON-java) from 20220924 to 20230227. - [Release notes](https://github.com/douglascrockford/JSON-java/releases) - [Changelog](https://github.com/stleary/JSON-java/blob/master/docs/RELEASES.md) - [Commits](https://github.com/douglascrockford/JSON-java/commits) --- updated-dependencies: - dependency-name: org.json:json dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com> * Update license file --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> | 14 April 2023, 21:11:51 UTC |
| 89c143a | Charles Overbeck | 14 April 2023, 20:34:48 UTC | Open Data Check for Hosted Workflows (#5460) #5339 In fixing this, discovered a test wasn't running because it was using JUnit 4 annotations, so converted to JUnit 5 and removed all JUnit 4 annotations, and removed JUnit 4 from the classpath. | 14 April 2023, 20:34:48 UTC |
| 810ca07 | Flynn Hembroff | 13 April 2023, 22:08:36 UTC | Made generateKey public (#5463) | 13 April 2023, 22:08:36 UTC |
| c7cc38b | Denis Yuen | 11 April 2023, 14:25:13 UTC | Update README.md | 11 April 2023, 14:25:13 UTC |
| 48cf9e4 | Denis Yuen | 10 April 2023, 15:24:57 UTC | Feature/public orcid api fallback (#5453) * Add public API fallback * add fallback test * fix test * pollution * comment cchange [skip ci] * Hmmm, still need build for required checks | 10 April 2023, 15:24:57 UTC |
| 031c573 | Nayeon Hyun | 10 April 2023, 15:14:15 UTC | SEAB-5318: Created GET endpoints for TRS metrics (#5449) * commit stub files * created get endpoint * fixed checkstyle * minor changes * minor changes * PR review changes * codacy check * checkstyle * checkstyle * fixed endpoint * more edits * pr change * removed debug statement * added change; --------- Co-authored-by: Denis Yuen <denis.yuen@oicr.on.ca> | 10 April 2023, 15:14:15 UTC |
| 12089d7 | Denis Yuen | 10 April 2023, 14:26:46 UTC | swap and add test (#5454) | 10 April 2023, 14:26:46 UTC |
| a5e7f12 | Kathy Tran | 05 April 2023, 21:15:59 UTC | Add validation metric to support miniwdl validation (#5447) https://ucsc-cgl.atlassian.net/browse/SEAB-4695 | 05 April 2023, 21:15:59 UTC |
| 199226f | Denis Yuen | 30 March 2023, 20:08:45 UTC | add a null check (#5448) | 30 March 2023, 20:08:45 UTC |
| 6ebbf3e | Denis Yuen | 29 March 2023, 18:16:13 UTC | make migration survive next change (#5442) * make migration survive next change * add comment | 29 March 2023, 18:16:13 UTC |
| fb9ebdf | Denis Yuen | 24 March 2023, 19:27:20 UTC | Feature/apptool count fix (#5439) * bump index for constraint * fix the count | 24 March 2023, 19:27:20 UTC |
| 967a0b5 | Charles Overbeck | 21 March 2023, 20:18:55 UTC | Capture Nextflow Engine version (#5433) #5389 PR has details. | 21 March 2023, 20:18:55 UTC |
| 97e3db2 | Charles Overbeck | 21 March 2023, 18:09:23 UTC | Do open data check for CWL (#5430) #5385 PR has details | 21 March 2023, 18:09:23 UTC |
| 15d12e4 | dependabot[bot] | 20 March 2023, 17:49:55 UTC | Bump actions/deploy-pages from 1 to 2 (#5434) Bumps [actions/deploy-pages](https://github.com/actions/deploy-pages) from 1 to 2. - [Release notes](https://github.com/actions/deploy-pages/releases) - [Commits](https://github.com/actions/deploy-pages/compare/v1...v2) --- updated-dependencies: - dependency-name: actions/deploy-pages dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> | 20 March 2023, 17:49:55 UTC |
| 65e5035 | Denis Yuen | 20 March 2023, 14:49:33 UTC | hook up flag and cache behaviour (#5426) * hook up flag and cache behaviour * should probably add warning * add back handler | 20 March 2023, 14:49:33 UTC |
| c49040d | Nayeon Hyun | 20 March 2023, 14:11:39 UTC | SEAB-5122 starred notebook endpoint (#5406) * commit stub files * created endpoint * added test * codacy check fix * helper function * helper function javadoc * helper function method reference * helper function shortened * fixed test * pr review change --------- Co-authored-by: Denis Yuen <denis.yuen@oicr.on.ca> | 20 March 2023, 14:11:39 UTC |
| 6b33242 | Kathy Tran | 20 March 2023, 12:13:27 UTC | Fix file name in getToolTesterLogs (#5431) https://github.com/dockstore/dockstore/issues/4359 https://ucsc-cgl.atlassian.net/browse/DOCK-1859 * Get actual filename instead of s3 key when getting tooltester logs | 20 March 2023, 12:13:27 UTC |
| 039f3d8 | Steve Von Worley | 18 March 2023, 03:45:42 UTC | miscellaneous notebook tweaks https://ucsc-cgl.atlassian.net/browse/SEAB-5116 | 18 March 2023, 03:45:42 UTC |
| 500294a | Denis Yuen | 16 March 2023, 19:27:12 UTC | more fix more test (#5424) | 16 March 2023, 19:27:12 UTC |
| d8682c7 | Denis Yuen | 16 March 2023, 17:01:20 UTC | more dates and a test (#5425) | 16 March 2023, 17:01:20 UTC |
| 9b477a0 | Denis Yuen | 16 March 2023, 17:00:38 UTC | may just work, image is v2 https://discuss.circleci.com/t/linux-machine-executor-update-2022-october-q4-update/45753 (#5420) | 16 March 2023, 17:00:38 UTC |
| f96e92a | Steve Von Worley | 10 March 2023, 17:27:50 UTC | overhaul github app install branch-discovery code https://ucsc-cgl.atlassian.net/browse/SEAB-5281 | 10 March 2023, 17:27:50 UTC |
| eb1214b | Steve Von Worley | 10 March 2023, 00:44:16 UTC | add user-specified kernel reference to notebook https://ucsc-cgl.atlassian.net/browse/SEAB-5239 | 10 March 2023, 00:44:16 UTC |
| 10ac82a | Denis Yuen | 09 March 2023, 18:02:42 UTC | add platform partner role (#5408) * add platform partner role * schema documentation | 09 March 2023, 18:02:42 UTC |
| 7d92c69 | Charles Overbeck | 08 March 2023, 22:36:21 UTC | Check for open data based on inputs (#5347) #5339 | 08 March 2023, 22:36:21 UTC |
| cf63211 | Denis Yuen | 08 March 2023, 15:18:30 UTC | Feature/triple 2 record (#5404) * minor cleanup, replace triple with record for readability * some codacy happiness * pr feedback | 08 March 2023, 15:18:30 UTC |
| 1b01385 | Steve Von Worley | 07 March 2023, 21:04:40 UTC | add additional type information to Entry https://ucsc-cgl.atlassian.net/browse/SEAB-5270 | 07 March 2023, 21:04:40 UTC |
| eaf5971 | dependabot[bot] | 07 March 2023, 18:04:44 UTC | Bump aws-actions/configure-aws-credentials from 1 to 2 (#5405) Bumps [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) from 1 to 2. - [Release notes](https://github.com/aws-actions/configure-aws-credentials/releases) - [Changelog](https://github.com/aws-actions/configure-aws-credentials/blob/main/CHANGELOG.md) - [Commits](https://github.com/aws-actions/configure-aws-credentials/compare/v1...v2) --- updated-dependencies: - dependency-name: aws-actions/configure-aws-credentials dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> | 07 March 2023, 18:04:44 UTC |
| d623dfe | Denis Yuen | 03 March 2023, 15:13:54 UTC | dropwizard 2.1.5 update (#5392) * new liquibase validation? * pick exact tested jackson version | 03 March 2023, 15:13:54 UTC |
| 290bc2c | Kathy Tran | 03 March 2023, 14:01:43 UTC | Add endpoint to post aggregated metrics, fix S3 client region (#5381) https://ucsc-cgl.atlassian.net/browse/SEAB-5062 * Add endpoint to post aggregregated metrics * Fix S3 Client region * Validate that execution time is in ISO 8601 format when user submits executions | 03 March 2023, 14:01:43 UTC |
| e674246 | Denis Yuen | 02 March 2023, 18:09:06 UTC | workflow-level README (#5384) * add a few more tests * extract method | 02 March 2023, 18:09:06 UTC |
| c49cb50 | Denis Yuen | 01 March 2023, 15:05:39 UTC | Feature/events for user orgs (#5391) * with tests | 01 March 2023, 15:05:39 UTC |
| 9b22fd3 | Nayeon Hyun | 28 February 2023, 15:10:10 UTC | SEAB-5103: Notebook support in RSS Feed (#5383) * commit stub files * added notebook to rss * created test * checkstyle * removed debug code * removed debug code * removed unused code * override resetdb method * remove codesmell * remove codesmell * fixed test --------- Co-authored-by: Denis Yuen <denis.yuen@oicr.on.ca> | 28 February 2023, 15:10:10 UTC |
| f84d5bc | Denis Yuen | 24 February 2023, 21:14:50 UTC | just the rename | 27 February 2023, 20:32:44 UTC |
| 93f1138 | Denis Yuen | 24 February 2023, 21:06:42 UTC | move | 27 February 2023, 20:32:44 UTC |
| 040fdc1 | Nayeon Hyun | 27 February 2023, 16:21:45 UTC | SEAB-5112: Test notebook collections (#5377) * commit stub files * started test * creating test * added import * partial test * fixed test * fixed test * added collection test * fixed test * fixed test * fixed test * reorganized code and added comments * removed unused method * add more test coverage * checkstyle * checkstyle --------- Co-authored-by: Denis Yuen <denis.yuen@oicr.on.ca> | 27 February 2023, 16:21:45 UTC |
| 5c76df5 | Flynn Hembroff | 27 February 2023, 15:25:41 UTC | Corrected Typos in dockstore/dockstore (#5387) * Corrected a lot of typos * Undid changes to migrations | 27 February 2023, 15:25:41 UTC |
| 60e4ded | Steve Von Worley | 24 February 2023, 00:46:11 UTC | update TRS for notebooks https://ucsc-cgl.atlassian.net/browse/SEAB-5108 | 24 February 2023, 00:46:11 UTC |
| e8eb352 | Steve Von Worley | 23 February 2023, 17:28:17 UTC | add additional ES-related notebook test https://ucsc-cgl.atlassian.net/browse/SEAB-5205 | 23 February 2023, 17:28:17 UTC |
| 093ccd8 | Steve Von Worley | 21 February 2023, 23:03:40 UTC | change "ipynb" naming to "jupyter" https://ucsc-cgl.atlassian.net/browse/SEAB-5248 | 21 February 2023, 23:03:40 UTC |
| 3a217a6 | Denis Yuen | 21 February 2023, 16:46:27 UTC | Feature/jwt refactor (#5373) * clean-up of custom code in favour of library support for JWTs | 21 February 2023, 16:46:27 UTC |
| 25596cb | Nayeon Hyun | 18 February 2023, 02:21:48 UTC | SEAB-5111: added test for starring notebook (#5375) * commit stub files * added notebook starring test * edited import statement * tested unstarring * imported ApiClient and WorkflowsApi * reordered import * readded test * readded test * readded test --------- Co-authored-by: Denis Yuen <denis.yuen@oicr.on.ca> | 18 February 2023, 02:21:48 UTC |
| 20592fc | Denis Yuen | 17 February 2023, 15:34:50 UTC | hack for galaxy version parsing for existing workflows (#5374) * hack for galaxy version parsing for existing workflows * improve language display in search | 17 February 2023, 15:34:50 UTC |
| e3a05b6 | Steve Von Worley | 16 February 2023, 20:21:37 UTC | adjust webservice endpoints for notebooks https://ucsc-cgl.atlassian.net/browse/SEAB-5108 | 16 February 2023, 20:21:37 UTC |
| b602fd2 | Denis Yuen | 15 February 2023, 15:15:35 UTC | attempt db documentation generation (#5370) * guess we need a proper db to get good docs * let entire build run to get checkmarks on things | 15 February 2023, 15:15:35 UTC |
| 2327f6a | Kathy Tran | 14 February 2023, 18:11:55 UTC | Create endpoint to send metrics to S3 (#5357) https://ucsc-cgl.atlassian.net/browse/SEAB-5062 | 14 February 2023, 18:11:55 UTC |
